Literature DB >> 28855172

Genome-wide association and functional studies identify a role for matrix Gla protein in osteoarthritis of the hand.

Wouter den Hollander1, Cindy G Boer2, Deborah J Hart3, Michelle S Yau4,5, Yolande F M Ramos1, Sarah Metrustry3, Linda Broer2, Joris Deelen1,6, L Adrienne Cupples7, Fernando Rivadeneira2, Margreet Kloppenburg8, Marjolein Peters2, Tim D Spector3, Albert Hofman9,10, P Eline Slagboom1, Rob G H H Nelissen11, André G Uitterlinden2,9, David T Felson12, Ana M Valdes13, Ingrid Meulenbelt1, Joyce J B van Meurs2.   

Abstract

OBJECTIVE: Osteoarthritis (OA) is the most common form of arthritis and the leading cause of disability in the elderly. Of all the joints, genetic predisposition is strongest for OA of the hand; however, only few genetic risk loci for hand OA have been identified. Our aim was to identify novel genes associated with hand OA and examine the underlying mechanism.
METHODS: We performed a genome-wide association study of a quantitative measure of hand OA in 12 784 individuals (discovery: 8743, replication: 4011). Genome-wide significant signals were followed up by analysing gene and allele-specific expression in a RNA sequencing dataset (n=96) of human articular cartilage.
RESULTS: We found two significantly associated loci in the discovery set: at chr12 (p=3.5 × 10-10) near the matrix Gla protein (MGP) gene and at chr12 (p=6.1×10-9) near the CCDC91 gene. The DNA variant near the MGP gene was validated in three additional studies, which resulted in a highly significant association between the MGP variant and hand OA (rs4764133, Betameta=0.83, Pmeta=1.8*10-15). This variant is high linkage disequilibrium with a coding variant in MGP, a vitamin K-dependent inhibitor of cartilage calcification. Using RNA sequencing data from human primary cartilage tissue (n=96), we observed that the MGP RNA expression of the hand OA risk allele was significantly lowercompared with the MGP RNA expression of the reference allele (40.7%, p<5*10-16).
CONCLUSIONS: Our results indicate that the association between the MGP variant and increased risk for hand OA is caused by a lower expression of MGP, which may increase the burden of hand OA by decreased inhibition of cartilage calcification. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2017. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

Entities:  

Keywords:  Matrix-Gla protein; functional study; genetics; genome-wide association study; hand osteoarthritis

Mesh:

Substances:

Year:  2017        PMID: 28855172      PMCID: PMC5788019          DOI: 10.1136/annrheumdis-2017-211214

Source DB:  PubMed          Journal:  Ann Rheum Dis        ISSN: 0003-4967            Impact factor:   19.103


  40 in total

1.  Radiological assessment of osteo-arthrosis.

Authors:  J H KELLGREN; J S LAWRENCE
Journal:  Ann Rheum Dis       Date:  1957-12       Impact factor: 19.103

2.  Increased type II deiodinase protein in OA-affected cartilage and allelic imbalance of OA risk polymorphism rs225014 at DIO2 in human OA joint tissues.

Authors:  Steffan D Bos; Judith V M G Bovée; Bouke J Duijnisveld; Emma V A Raine; Wouter J van Dalen; Yolande F M Ramos; Ruud van der Breggen; Rob G H H Nelissen; P Eline Slagboom; John Loughlin; Ingrid Meulenbelt
Journal:  Ann Rheum Dis       Date:  2012-04-04       Impact factor: 19.103

3.  The association between vitamin K status and knee osteoarthritis features in older adults: the Health, Aging and Body Composition Study.

Authors:  M K Shea; S B Kritchevsky; F-C Hsu; M Nevitt; S L Booth; C K Kwoh; T E McAlindon; C Vermeer; N Drummen; T B Harris; C Womack; R F Loeser
Journal:  Osteoarthritis Cartilage       Date:  2014-12-17       Impact factor: 6.576

Review 4.  Large-scale meta-analysis of interleukin-1 beta and interleukin-1 receptor antagonist polymorphisms on risk of radiographic hip and knee osteoarthritis and severity of knee osteoarthritis.

Authors:  H J M Kerkhof; M Doherty; N K Arden; S B Abramson; M Attur; S D Bos; C Cooper; E M Dennison; S A Doherty; E Evangelou; D J Hart; A Hofman; K Javaid; I Kerna; K Kisand; M Kloppenburg; S Krasnokutsky; R A Maciewicz; I Meulenbelt; K R Muir; F Rivadeneira; J Samuels; M Sezgin; E Slagboom; A J P Smith; T D Spector; A Tamm; A Tamm; A G Uitterlinden; M Wheeler; G Zhai; W Zhang; J B J van Meurs; A M Valdes
Journal:  Osteoarthritis Cartilage       Date:  2010-12-10       Impact factor: 6.576

Review 5.  Risk factors for osteoarthritis: understanding joint vulnerability.

Authors:  David T Felson
Journal:  Clin Orthop Relat Res       Date:  2004-10       Impact factor: 4.176

6.  New sequence variants in HLA class II/III region associated with susceptibility to knee osteoarthritis identified by genome-wide association study.

Authors:  Masahiro Nakajima; Atsushi Takahashi; Ikuyo Kou; Cristina Rodriguez-Fontenla; Juan J Gomez-Reino; Tatsuya Furuichi; Jin Dai; Akihiro Sudo; Atsumasa Uchida; Naoshi Fukui; Michiaki Kubo; Naoyuki Kamatani; Tatsuhiko Tsunoda; Konstantinos N Malizos; Aspasia Tsezou; Antonio Gonzalez; Yusuke Nakamura; Shiro Ikegawa
Journal:  PLoS One       Date:  2010-03-18       Impact factor: 3.240

7.  Heritability patterns in hand osteoarthritis: the role of osteophytes.

Authors:  Mariko L Ishimori; Roy D Altman; Myles J Cohen; Jinrui Cui; Xiuqing Guo; Jerome I Rotter; Michael H Weisman
Journal:  Arthritis Res Ther       Date:  2010-09-28       Impact factor: 5.156

8.  Novel Genetic Variants for Cartilage Thickness and Hip Osteoarthritis.

Authors:  Martha C Castaño-Betancourt; Dan S Evans; Yolande F M Ramos; Cindy G Boer; Sarah Metrustry; Youfang Liu; Wouter den Hollander; Jeroen van Rooij; Virginia B Kraus; Michelle S Yau; Braxton D Mitchell; Kenneth Muir; Albert Hofman; Michael Doherty; Sally Doherty; Weiya Zhang; Robert Kraaij; Fernando Rivadeneira; Elizabeth Barrett-Connor; Rose A Maciewicz; Nigel Arden; Rob G H H Nelissen; Margreet Kloppenburg; Joanne M Jordan; Michael C Nevitt; Eline P Slagboom; Deborah J Hart; Floris Lafeber; Unnur Styrkarsdottir; Eleftheria Zeggini; Evangelos Evangelou; Tim D Spector; Andre G Uitterlinden; Nancy E Lane; Ingrid Meulenbelt; Ana M Valdes; Joyce B J van Meurs
Journal:  PLoS Genet       Date:  2016-10-04       Impact factor: 5.917

9.  Integrative analysis of 111 reference human epigenomes.

Authors:  Anshul Kundaje; Wouter Meuleman; Jason Ernst; Misha Bilenky; Angela Yen; Alireza Heravi-Moussavi; Pouya Kheradpour; Zhizhuo Zhang; Jianrong Wang; Michael J Ziller; Viren Amin; John W Whitaker; Matthew D Schultz; Lucas D Ward; Abhishek Sarkar; Gerald Quon; Richard S Sandstrom; Matthew L Eaton; Yi-Chieh Wu; Andreas R Pfenning; Xinchen Wang; Melina Claussnitzer; Yaping Liu; Cristian Coarfa; R Alan Harris; Noam Shoresh; Charles B Epstein; Elizabeta Gjoneska; Danny Leung; Wei Xie; R David Hawkins; Ryan Lister; Chibo Hong; Philippe Gascard; Andrew J Mungall; Richard Moore; Eric Chuah; Angela Tam; Theresa K Canfield; R Scott Hansen; Rajinder Kaul; Peter J Sabo; Mukul S Bansal; Annaick Carles; Jesse R Dixon; Kai-How Farh; Soheil Feizi; Rosa Karlic; Ah-Ram Kim; Ashwinikumar Kulkarni; Daofeng Li; Rebecca Lowdon; GiNell Elliott; Tim R Mercer; Shane J Neph; Vitor Onuchic; Paz Polak; Nisha Rajagopal; Pradipta Ray; Richard C Sallari; Kyle T Siebenthall; Nicholas A Sinnott-Armstrong; Michael Stevens; Robert E Thurman; Jie Wu; Bo Zhang; Xin Zhou; Arthur E Beaudet; Laurie A Boyer; Philip L De Jager; Peggy J Farnham; Susan J Fisher; David Haussler; Steven J M Jones; Wei Li; Marco A Marra; Michael T McManus; Shamil Sunyaev; James A Thomson; Thea D Tlsty; Li-Huei Tsai; Wei Wang; Robert A Waterland; Michael Q Zhang; Lisa H Chadwick; Bradley E Bernstein; Joseph F Costello; Joseph R Ecker; Martin Hirst; Alexander Meissner; Aleksandar Milosavljevic; Bing Ren; John A Stamatoyannopoulos; Ting Wang; Manolis Kellis
Journal:  Nature       Date:  2015-02-19       Impact factor: 69.504

Review 10.  A meta-analysis of genome-wide association studies identifies novel variants associated with osteoarthritis of the hip.

Authors:  Evangelos Evangelou; Hanneke J Kerkhof; Unnur Styrkarsdottir; Evangelia E Ntzani; Steffan D Bos; Tonu Esko; Daniel S Evans; Sarah Metrustry; Kalliope Panoutsopoulou; Yolande F M Ramos; Gudmar Thorleifsson; Konstantinos K Tsilidis; Nigel Arden; Nadim Aslam; Nicholas Bellamy; Fraser Birrell; Francisco J Blanco; Andrew Carr; Kay Chapman; Aaron G Day-Williams; Panos Deloukas; Michael Doherty; Gunnar Engström; Hafdis T Helgadottir; Albert Hofman; Thorvaldur Ingvarsson; Helgi Jonsson; Aime Keis; J Christiaan Keurentjes; Margreet Kloppenburg; Penelope A Lind; Andrew McCaskie; Nicholas G Martin; Lili Milani; Grant W Montgomery; Rob G H H Nelissen; Michael C Nevitt; Peter M Nilsson; William Er Ollier; Neeta Parimi; Ashok Rai; Stuart H Ralston; Mike R Reed; Jose A Riancho; Fernando Rivadeneira; Cristina Rodriguez-Fontenla; Lorraine Southam; Unnur Thorsteinsdottir; Aspasia Tsezou; Gillian A Wallis; J Mark Wilkinson; Antonio Gonzalez; Nancy E Lane; L Stefan Lohmander; John Loughlin; Andres Metspalu; Andre G Uitterlinden; Ingileif Jonsdottir; Kari Stefansson; P Eline Slagboom; Eleftheria Zeggini; Ingrid Meulenbelt; John Pa Ioannidis; Tim D Spector; Joyce B J van Meurs; Ana M Valdes
Journal:  Ann Rheum Dis       Date:  2013-08-29       Impact factor: 19.103

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  17 in total

1.  Deciphering osteoarthritis genetics across 826,690 individuals from 9 populations.

Authors:  Cindy G Boer; Konstantinos Hatzikotoulas; Lorraine Southam; Lilja Stefánsdóttir; Yanfei Zhang; Rodrigo Coutinho de Almeida; Tian T Wu; Jie Zheng; April Hartley; Maris Teder-Laving; Anne Heidi Skogholt; Chikashi Terao; Eleni Zengini; George Alexiadis; Andrei Barysenka; Gyda Bjornsdottir; Maiken E Gabrielsen; Arthur Gilly; Thorvaldur Ingvarsson; Marianne B Johnsen; Helgi Jonsson; Margreet Kloppenburg; Almut Luetge; Sigrun H Lund; Reedik Mägi; Massimo Mangino; Rob R G H H Nelissen; Manu Shivakumar; Julia Steinberg; Hiroshi Takuwa; Laurent F Thomas; Margo Tuerlings; George C Babis; Jason Pui Yin Cheung; Jae Hee Kang; Peter Kraft; Steven A Lietman; Dino Samartzis; P Eline Slagboom; Kari Stefansson; Unnur Thorsteinsdottir; Jonathan H Tobias; André G Uitterlinden; Bendik Winsvold; John-Anker Zwart; George Davey Smith; Pak Chung Sham; Gudmar Thorleifsson; Tom R Gaunt; Andrew P Morris; Ana M Valdes; Aspasia Tsezou; Kathryn S E Cheah; Shiro Ikegawa; Kristian Hveem; Tõnu Esko; J Mark Wilkinson; Ingrid Meulenbelt; Ming Ta Michael Lee; Joyce B J van Meurs; Unnur Styrkársdóttir; Eleftheria Zeggini
Journal:  Cell       Date:  2021-08-26       Impact factor: 41.582

2.  Familial Clustering and Genetic Analysis of Severe Thumb Carpometacarpal Joint Osteoarthritis in a Large Statewide Cohort.

Authors:  Catherine M Gavile; Nikolas H Kazmers; Kendra A Novak; Huong D Meeks; Zhe Yu; Joy L Thomas; Channing Hansen; Tyler Barker; Michael J Jurynec
Journal:  J Hand Surg Am       Date:  2022-09-29       Impact factor: 2.342

3.  Genetic association analysis of Osteopontin and Matrix Gla Protein genes polymorphisms with primary knee osteoarthritis in Mexican population.

Authors:  Verónica Marusa Borgonio-Cuadra; Norma Celia González-Huerta; Emma Xochitl Rojas-Toledo; Eugenio Morales-Hernández; Nonanzit Pérez-Hernández; José Manuel Rodríguez-Pérez; Carlos Alfonso Tovilla-Zárate; Thelma Beatriz González-Castro; Yazmín Hernández-Díaz; María Lilia López-Narváez; Antonio Miranda-Duarte
Journal:  Clin Rheumatol       Date:  2018-05-18       Impact factor: 2.980

Review 4.  Osteoarthritis year in review 2017: genetics and epigenetics.

Authors:  M J Peffers; P Balaskas; A Smagul
Journal:  Osteoarthritis Cartilage       Date:  2017-10-06       Impact factor: 6.576

5.  Evidence for Genetic Contribution to Variation in Posttraumatic Osteoarthritis in Mice.

Authors:  Nobuaki Chinzei; Muhammad Farooq Rai; Shingo Hashimoto; Eric J Schmidt; Ken Takebe; James M Cheverud; Linda J Sandell
Journal:  Arthritis Rheumatol       Date:  2019-01-25       Impact factor: 10.995

6.  Familial Clustering of Erosive Hand Osteoarthritis in a Large Statewide Cohort.

Authors:  Nikolas H Kazmers; Huong D Meeks; Kendra A Novak; Zhe Yu; Gail L Fulde; Joy L Thomas; Tyler Barker; Michael J Jurynec
Journal:  Arthritis Rheumatol       Date:  2021-01-29       Impact factor: 10.995

7.  Genome-wide meta-analysis of 158,000 individuals of European ancestry identifies three loci associated with chronic back pain.

Authors:  Pradeep Suri; Melody R Palmer; Yakov A Tsepilov; Maxim B Freidin; Cindy G Boer; Michelle S Yau; Daniel S Evans; Andrea Gelemanovic; Traci M Bartz; Maria Nethander; Liubov Arbeeva; Lennart Karssen; Tuhina Neogi; Archie Campbell; Dan Mellstrom; Claes Ohlsson; Lynn M Marshall; Eric Orwoll; Andre Uitterlinden; Jerome I Rotter; Gordan Lauc; Bruce M Psaty; Magnus K Karlsson; Nancy E Lane; Gail P Jarvik; Ozren Polasek; Marc Hochberg; Joanne M Jordan; Joyce B J Van Meurs; Rebecca Jackson; Carrie M Nielson; Braxton D Mitchell; Blair H Smith; Caroline Hayward; Nicholas L Smith; Yurii S Aulchenko; Frances M K Williams
Journal:  PLoS Genet       Date:  2018-09-27       Impact factor: 6.020

8.  Expression analysis of the osteoarthritis genetic susceptibility mapping to the matrix Gla protein gene MGP.

Authors:  Colin Shepherd; Abigail E Reese; Louise N Reynard; John Loughlin
Journal:  Arthritis Res Ther       Date:  2019-06-18       Impact factor: 5.156

9.  Functional testing of thousands of osteoarthritis-associated variants for regulatory activity.

Authors:  Jason C Klein; Aidan Keith; Sarah J Rice; Colin Shepherd; Vikram Agarwal; John Loughlin; Jay Shendure
Journal:  Nat Commun       Date:  2019-06-04       Impact factor: 14.919

10.  Annotating Transcriptional Effects of Genetic Variants in Disease-Relevant Tissue: Transcriptome-Wide Allelic Imbalance in Osteoarthritic Cartilage.

Authors:  Wouter den Hollander; Irina Pulyakhina; Cindy Boer; Nils Bomer; Ruud van der Breggen; Wibowo Arindrarto; Rodrigo Couthino de Almeida; Nico Lakenberg; Thom Sentner; Jeroen F J Laros; Peter A C 't Hoen; Eline P E Slagboom; Rob G H H Nelissen; Joyce van Meurs; Yolande F M Ramos; Ingrid Meulenbelt
Journal:  Arthritis Rheumatol       Date:  2019-02-23       Impact factor: 10.995

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