Literature DB >> 2471838

Successive waves of fixation of B1 variants in rodent lineage history.

Y Quentin1.   

Abstract

A new method of analyzing phylogenetic relations among members of sequence family (Quentin 1988) discriminates at least six possible B1 subfamilies in the mouse genome. Several additional and independent observations suggest that these groupings have evolutionary significance, and that successive waves of fixation of new variants occur during rodent lineage history. We have reason to believe that, in a genome, the founder sequences of different families of retroposons are in competition with regard to the amplification/fixation process.

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Year:  1989        PMID: 2471838     DOI: 10.1007/bf02103425

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  26 in total

1.  Interrelatedness of 5S RNA sequences investigated by correspondence analysis.

Authors:  C A Mannella; J Frank; N Delihas
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

2.  Integration site preferences of the Alu family and similar repetitive DNA sequences.

Authors:  G R Daniels; P L Deininger
Journal:  Nucleic Acids Res       Date:  1985-12-20       Impact factor: 16.971

3.  Existence of at least three distinct Alu subfamilies.

Authors:  C Willard; H T Nguyen; C W Schmid
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

4.  Clustering and subfamily relationships of the Alu family in the human genome.

Authors:  V Slagel; E Flemington; V Traina-Dorge; H Bradshaw; P Deininger
Journal:  Mol Biol Evol       Date:  1987-01       Impact factor: 16.240

5.  Low molecular weight RNAs transcribed in vitro by RNA polymerase III from Alu-type dispersed repeats in Chinese hamster DNA are also found in vivo.

Authors:  S R Haynes; W R Jelinek
Journal:  Proc Natl Acad Sci U S A       Date:  1981-10       Impact factor: 11.205

6.  DNA methylation and the frequency of CpG in animal DNA.

Authors:  A P Bird
Journal:  Nucleic Acids Res       Date:  1980-04-11       Impact factor: 16.971

7.  A B1 repetitive sequence near the mouse beta-major globin gene.

Authors:  L W Coggins; J K Vass; M A Stinson; W G Lanyon; J Paul
Journal:  Gene       Date:  1982-01       Impact factor: 3.688

8.  Construction and expression in vivo of an internally deleted mouse alpha-fetoprotein gene: presence of a transcribed Alu-like repeat within the first intervening sequence.

Authors:  P R Young; R W Scott; D H Hamer; S M Tilghman
Journal:  Nucleic Acids Res       Date:  1982-05-25       Impact factor: 16.971

9.  A cluster of repetitive elements within a 700 base pair region in the mouse genome.

Authors:  V F Kalb; S Glasser; D King; J B Lingrel
Journal:  Nucleic Acids Res       Date:  1983-04-11       Impact factor: 16.971

10.  Alu sequences are processed 7SL RNA genes.

Authors:  E Ullu; C Tschudi
Journal:  Nature       Date:  1984 Nov 8-14       Impact factor: 49.962

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  29 in total

1.  Use and misuse of correspondence analysis in codon usage studies.

Authors:  Guy Perrière; Jean Thioulouse
Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

2.  Phylogenetic evidence for multiple Alu source genes.

Authors:  E P Leeflang; W M Liu; C Hashimoto; P V Choudary; C W Schmid
Journal:  J Mol Evol       Date:  1992-07       Impact factor: 2.395

Review 3.  Dispersed repetitive elements in mouse genome analysis.

Authors:  G E Herman; J H Nadeau; S C Hardies
Journal:  Mamm Genome       Date:  1992       Impact factor: 2.957

4.  Evolution of mouse B1 repeats: 7SL RNA folding pattern conserved.

Authors:  D Labuda; D Sinnett; C Richer; J M Deragon; G Striker
Journal:  J Mol Evol       Date:  1991-05       Impact factor: 2.395

5.  Fusion of a free left Alu monomer and a free right Alu monomer at the origin of the Alu family in the primate genomes.

Authors:  Y Quentin
Journal:  Nucleic Acids Res       Date:  1992-02-11       Impact factor: 16.971

6.  Free left arms as precursor molecules in the evolution of Alu sequences.

Authors:  J Jurka; E Zuckerkandl
Journal:  J Mol Evol       Date:  1991-07       Impact factor: 2.395

7.  Multiple dispersed loci produce small cytoplasmic Alu RNA.

Authors:  R J Maraia; C T Driscoll; T Bilyeu; K Hsu; G J Darlington
Journal:  Mol Cell Biol       Date:  1993-07       Impact factor: 4.272

8.  Negative regulation of immunoglobulin kappa light-chain gene transcription by a short sequence homologous to the murine B1 repetitive element.

Authors:  K Saksela; D Baltimore
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

9.  The RNA polymerase III terminator used by a B1-Alu element can modulate 3' processing of the intermediate RNA product.

Authors:  R J Maraia; D Y Chang; A P Wolffe; R L Vorce; K Hsu
Journal:  Mol Cell Biol       Date:  1992-04       Impact factor: 4.272

10.  Characterization of the cow stomach lysozyme genes: repetitive DNA and concerted evolution.

Authors:  D M Irwin; R T White; A C Wilson
Journal:  J Mol Evol       Date:  1993-10       Impact factor: 2.395

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