| Literature DB >> 24705629 |
Monde Muyoyeta1, Pragnya Maduskar2, Maureen Moyo1, Nkatya Kasese1, Deborah Milimo1, Rosanna Spooner1, Nathan Kapata3, Laurens Hogeweg2, Bram van Ginneken2, Helen Ayles4.
Abstract
OBJECTIVE: To determine the sensitivity and specificity of a Computer Aided Diagnosis (CAD) program for scoring chest x-rays (CXRs) of presumptive tuberculosis (TB) patients compared to Xpert MTB/RIF (Xpert).Entities:
Mesh:
Year: 2014 PMID: 24705629 PMCID: PMC3976315 DOI: 10.1371/journal.pone.0093757
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1ROC on a test set of 969 CXRs.
Figure 2Patient flow.
Baseline characteristics of presumptive TB patients with abnormal and Normal Chest x-ray.
| All | Abnormal CXR | Normal CXR | p-Value | |
| 350(%) | 291(%) | 59(%) | ||
|
| 0.007 | |||
| Male | 215(61.4) | 187(64.3) | 27(45.8) | |
| Female | 135(38.6) | 103(35.4) | 32(54.2) | |
|
| 36.5(11.6) | 36.2(11.4) | 37.7(12.4) | 0.369 |
|
| 0.912 | |||
| <2week | 93(26.7) | 76(26.1) | 17(28.8) | 0.691 |
| 2–8 weeks | 226(64.6) | 189(64.9) | 37(62.7) | 0.771 |
| >8 weeks | 31(8.9) | 26(8.9) | 5(8.5) | 0.444 |
|
| 0.269 | |||
| No | 272(77.7) | 223(76.6) | 49(83.0) | |
| Yes | 78(22.3) | 68(23.4) | 10(16.9) | |
|
| 0.018 | |||
| Negative | 148(42.3) | 115(39.5) | 33(55.9) | |
| Positive | 190(54.3) | 166(57.0) | 24(40.7) | |
| Unknown status | 12(3.4) | 10(3.4) | 2(3.4) | |
|
| 0.053 | |||
| No | 74(21.1) | 56(19.2) | 18(30.5) | |
| Yes | 276(78.9) | 235(80.8) | 41(69.5) | |
|
| <0.0001 | |||
| No | 173(49.3) | 131(45.0) | 42(71.2) | |
| Yes | 177(50.7) | 160(55.0) | 17(28.8) | |
|
| 0.565 | |||
| No | 29(8.3) | 23(7.9) | 6(10.2) | |
| Yes | 321(91.7) | 268(92.1) | 53(89.8) | |
|
| <0.0001 | |||
| No | 246(70.3) | 192(66.0) | 54(91.5) | |
| Yes | 104(29.7) | 99(34.0) | 5(8.5) | |
|
| 0.025 | |||
| No | 111(31.7) | 85(29.2) | 26(44.1) | |
| Yes | 239(68.3) | 206(70.8) | 33(55.9) | |
|
| ||||
| Negative | 298(85.1) | 240(82.5) | 58(98.3) | <0.0001 |
| Scanty positive | 8(2.3) | 8(2.7) | 0 | 0.225 |
| 1+ | 12(3.4) | 12(4.1) | 0 | 0.105 |
| 2+ | 17(4.9) | 16(5.5) | 1(1.7) | 0.160 |
| 3+ | 15(4.3) | 15(5.1) | 0 | 0.059 |
|
| ||||
| No TB detected | 254(72.6) | 195(67.0) | 59(100.0) | <0.0001 |
| >28(very low TB) | 16(4.6) | 16(5.5) | 0 | 0.049 |
| 22–28(low TB) | 20(5.7) | 20(6.9) | 0 | 0.022 |
| 16–22(medium TB) | 36(10.3) | 36(12.4) | 0 | 0.001 |
| <16(high TB) | 24(6.9) | 24(8.2) | 0 | 0.010 |
Sensitivity, specificity of CXR compared to GeneXpert MTB/RIF.
| Compared to gold standard-Xpert TB Detected | ||||
| Sensitivity (%) | Specificity% | PPV | NPV | |
| (95%CI) | (95%CI) | (95%CI) | (95%CI) | |
|
| ||||
|
| 96/96 (100%) | 59/254 (23.2%) | 96/291(33.0%) | 59/59 (100%) |
| (96.2–100) | (18.2–28.9) | (27.6–38.7) | (93.9–100) | |
|
| 57/57 (100%) | 24/133 (18.0%) | 57/166 (34.3%) | 24/24 (100%) |
| (93.7–100) | (11.9–25.6) | (27.2–42.1) | (85.7–100) | |
|
| 35/35 (100%) | 33/113 (29.2%) | 35/115 (30.4%) | 33/33 (100%) |
| (90.0–100) | (21.0–38.5) | (22.2–39.7) | (89.4–100) | |
|
| ||||
|
| 45/45 (100%) | 58/253 (22.9%) | 45/240 (18.7%) | 58/58 (100%) |
| (92.1–100) | (17.9–28.6) | (14.0–24.3) | (93.8–100) | |
|
| 34/34 (100%) | 24/133 (18.0%) | 34/143 (23.8%) | 24/24 (100%) |
| (89.7–100) | (11.9–25.6) | (17.1–31.6) | (85.7–100) | |
|
| 10/10 (100%) | 32/112 (28.6%) | 10/90 (11.1%) | 32/32 (100%) |
| (69.1–100) | (20.4–37.9) | (5.4–19.5) | (89.1–100) | |
*includes Unknown HIV status.
Figure 3ROC curve comparing CAD score to Xpert TB as the reference standard.
Sensitivity and specificity at different CAD score thresholds with Xpert TB as the reference standard.
| Sensitivity | 1-specificity | CAD Threshold |
| 0 | 0 | 99 |
| 0.01 | 0.00 | 99 |
| 0.02 | 0.00 | 97 |
| 0.09 | 0.03 | 95 |
| 0.16 | 0.08 | 94 |
| 0.18 | 0.09 | 93 |
| 0.29 | 0.14 | 92 |
| 0.47 | 0.23 | 91 |
| 0.59 | 0.31 | 88 |
| 0.60 | 0.31 | 86 |
| 0.63 | 0.32 | 84 |
| 0.75 | 0.42 | 82 |
| 0.86 | 0.55 | 81 |
| 0.88 | 0.55 | 76 |
| 0.88 | 0.56 | 74 |
| 0.88 | 0.57 | 72 |
| 0.99 | 0.75 | 69 |
| 1.00 | 0.77 | 61 |
| 1.00 | 0.98 | 60 |
| 1.00 | 1.00 | 56 |
Univariable and multivariable odds ratios showing patient characteristics associated with abnormal CAD score (61–100).
| CAD score ≥61 N = 291(%) | Unadjusted OR | 95%CI | Adjusted OR | 95%CI | |
|
| |||||
| Female | 103 (35.4) | 1.00 | 1.00 | ||
| Male | 188 (64.6) | 2.16 | 1.23–3.81 | 2.33 | 1.27–4.36 |
|
| |||||
| 15–24 | 30 (10.3) | 1.00 | |||
| 25–34 | 112 (38.5) | 0.93 | 0.32–2.69 | ||
| ≥35 | 145 (49.8) | 0.73 | 0.26–2.03 | ||
| Missing | 4 (1.4) | - | |||
|
| |||||
| <2week | 76 (26.6) | 1.00 | - | ||
| 2–8 weeks | 189 (64.9) | 1.14 | 0.61–2.15 | ||
| >8 weeks | 26 (8.9) | 1.16 | 0.39–3.47 | ||
|
| |||||
| No | 223 (76.6) | 1.00 | |||
| Yes | 68 (24.8) | 1.50 | 0.72–3.10 | ||
|
| |||||
| Negative | 115 (39.5) | 1.00 | - | 1.00 | |
| Positive | 166 (57.0) | 1.98 | 1.11–3.53 | 1.89 | 1.02–3.50 |
| Unknown status | 10 | ||||
|
| |||||
| No | 56 (19.2) | 1.00 | - | ||
| Yes | 235 (80.8) | 1.84 | 0.98–3.44 | ||
|
| |||||
| No | 131 (45.0) | 1.00 | - | 1.00 | |
| Yes | 160 (55.0) | 3.02 | 1.64–5.55 | 1.72 | 0.88–3.36 |
|
| |||||
| No | 23 (7.9) | 1.00 | - | ||
| Yes | 268 (92.1) | 1.32 | 0.51–3.39 | ||
|
| |||||
| No | 192 (66.0) | 1.00 | - | 1.00 | |
| Yes | 99 (34.0) | 5.57 | 2.16–14.37 | 4.20 | 1.55–11.39 |
|
| |||||
| No | 85 (29.2) | 1.00 | - | ||
| Yes | 206 (70.8) | 1.91 | 1.08–3.39 | ||
|
| |||||
| 1 | 3 (1.0) | 1.00 | |||
| 2 | 21 (7.2) | 2.10 | 0.63–12.31 | ||
| 3 | 43 (14.8) | 2.87 | 0.52–15.77 | ||
| 4 | 97 (33.30 | 5.39 | 1.01–28.84 | ||
| 5 or more | 127 (43.6) | 9.77 | 1.79–53.42 |