| Literature DB >> 24691183 |
Nizami Duran1, Muhyittin Temiz2, Gülay Gülbol Duran3, Naciye Eryılmaz2, Kemal Jenedi2.
Abstract
BACKGROUND: We aimed to investigate the prevalence of disinfectant resistance genes (qacA/qacB,qacC) and the aminoglycosides resistance genes [(aac(6')aph(2''),aph(3')-IIIa,ant(4')-Ia)] in both S. aureus and coagulase-negative staphylococcal strains (CoNS) isolated from surgical site infections.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24691183 PMCID: PMC3983099 DOI: 10.12659/MSM.890177
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Primer sequences and predicted sizes used in the multiplex PCRs for fem-A, mecA, aac(6′)/aph (2″), aph(3)-III a, ant (4′)-1a, qacA/qacB and qacC.
| Gene | Primers | Oligonucleotide sequence (5′-3′) | Size of amplified product (bp) |
|---|---|---|---|
| ACTGCTATCCACCCTCAAAC | 163 | ||
| CTGGTGAAGTTGTAATCTGG | |||
| 5′-GAAGTACGCAGAAGAGA-3′ | 491 | ||
| 5′-ACATGGCAAGCTCTAGGA-3′ | |||
| 5′-AAATACCGCTGCGTA-3′ | 242 | ||
| 5′-CATACTCTTCCGAGCAA-3′ | |||
| 5′-AATCGGTAGAAGCCCAA-3′ | 135 | ||
| 5′-GCACCTGCCATTGCTA-3′ | |||
| 5′-TCCTTTTAATGCTGGCTTATACC-3′ | 220 | ||
| 5′-AGCCKTACCTGCTCCAACTA-3′ | |||
| 5′-GGCTTTTCAAAATTTATACCATCCT-3′ | 249 | ||
| 5′-ATGCGATGTTCCGAAAATGT-3′ |
Correlation between antibiotics resistance and quaternary ammonium compounds resistance genes (qacA/qacB and qacC).
| Isolates | Amikacin resistance | Methicillin resistance gene | Quaternary ammonium resistance genes | ||||
|---|---|---|---|---|---|---|---|
| n | % | n | % | n | % | ||
| I – | 38 (resistant) | 28 | 73.7 | 18 | 47.4 | 11 | 28.9 |
| II – | 31 (sensitive) | 4 | 12.9 | 6 | 19.4 | 2 | 6.5 |
| III – | 29 (resistant) | 20 | 69.0 | 11 | 37.9 | 6 | 20.7 |
| IV – | 32 (sensitive) | 6 | 18.8 | 3 | 9.4 | 0 | 0.0 |
| Total | 130 | 58 | 44.6 | 38 | 29.2 | 19 | 14.6 |
p values for mecA: I–II: 0.000, I–III: NS, I–IV: 0.000, II–IV: <0.05; p values for qacA/qacB: I–II: 0.000, I–III: <0.05, I–IV: 0.000, II–IV: 0.01; p values for qacc: I–II: 0.000, I–III: <0.05, I–IV: 0.000, II–IV: 0.00; NS – non-significant.
The relation between amikacin resistance and amikacin resistance genes [aac(6′)/aph(2″),aph(3′)-IIIa, ant(4′)-Ia].
| Isolates | Amikacin resistance | Amikacin resistance genes | Number of PCR negative isolates | ||||||
|---|---|---|---|---|---|---|---|---|---|
| n | % | n | % | n | % | n | % | ||
| I – | 38 (resistant) | 17 | 48.6 | 11 | 28.9 | 10 | 26.3 | 0 | 0.0 |
| II – | 31 (sensitive) | 3 | 9.7 | 1 | 3.2 | 0 | 0.0 | 27 | 87.1 |
| III – | 29 (resistant) | 13 | 44.8 | 11 | 37.9 | 7 | 24.1 | 0 | 0.0 |
| IV – | 32 (sensitive) | 2 | 6.3 | 3 | 9.4 | 1 | 3.1 | 26 | 81.3 |
| Total | 130 | 35 | 100.0 | 26 | 100.0 | 18 | 100.0 | 53 | 100.0 |
p values for aac(6′)/aph(2″): I–II: 0.000, I–III: NS, I–IV: 0.000, II–IV: <0.05; p values for aph(3′)-IIIa: I–II: 0.000, I–III: NS, I–IV: 0.00, II–IV: 0.01; p values for Ant(4′)-Ia: I–II: 0.000, I–III: NS, I–IV: 0.000, II–IV: NS; NS – non-significant.
The relation between antibiotics resistance and quaternary ammonium resistance genes (qacA/qacB, qacC).
| Isolates | Amikacin resistance | Total | % | ||||
|---|---|---|---|---|---|---|---|
| n | % | n | % | ||||
| I – | 38 (resistant) | 19 | 50 | 7 | 18.4 | 26 | 68.4 |
| II – | 31 (sensitive) | 3 | 9.7 | 0 | 0.0 | 3 | 9.7 |
| III – | 29 (resistant) | 4 | 13.8 | 2 | 6.9 | 6 | 20.7 |
| IV – | 32 (sensitive) | 1 | 3.1 | 1 | 3.1 | 2 | 6.3 |
| Total | 130 | 27 | 20.8 | 10 | 7.7 | 37 | 28.5 |
p values for mecA and qacA/qacB positivity: I–II: 0.000, I–III: 0.00, I–IV: 0.000, II–IV: NS;
p values for mecA and qacC positivity: I–II: 0.000, I–III: 0.00, I–IV: 0.00, II–IV: <0.05; NS – non-significant.
The relation between quaternary ammonium resistance genes (qacA/qacB, qacC) and chlorhexidine MIC values.
| Isolates | n | Chlorhexidine resistance and quaternary ammonium resistance genes | |||||
|---|---|---|---|---|---|---|---|
| Both chlorhexidine resistant and | Both chlorhexidine resistant and | ||||||
| n | % | n | % | Total (n) | % | ||
| I – | 69 | 24/24 | 100.0 | 11/13 | 84.6 | 35 | 50.7 |
| II – | 61 | 13/14 | 92.9 | 5/6 | 83.3 | 18 | 29.9 |
| Total | 130 | 37/130 | 285.0 | 16 | 12.3 | 53/130 | 40.8 |
p values for chlorhexidine and qacA/qacB positivity: I–II: NS; p values for chlorhexidine and qacC positivity: I–II: NS; NS – non-significant.