Literature DB >> 24684004

Dictionary learning on the manifold of square root densities and application to reconstruction of diffusion propagator fields.

Jiaqi Sun, Yuchen Xie, Wenxing Ye, Jeffrey Ho, Alireza Entezari, Stephen J Blackband, Baba C Vemuri.   

Abstract

In this paper, we present a novel dictionary learning framework for data lying on the manifold of square root densities and apply it to the reconstruction of diffusion propagator (DP) fields given a multi-shell diffusion MRI data set. Unlike most of the existing dictionary learning algorithms which rely on the assumption that the data points are vectors in some Euclidean space, our dictionary learning algorithm is designed to incorporate the intrinsic geometric structure of manifolds and performs better than traditional dictionary learning approaches when applied to data lying on the manifold of square root densities. Non-negativity as well as smoothness across the whole field of the reconstructed DPs is guaranteed in our approach. We demonstrate the advantage of our approach by comparing it with an existing dictionary based reconstruction method on synthetic and real multi-shell MRI data.

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Year:  2013        PMID: 24684004      PMCID: PMC4000552          DOI: 10.1007/978-3-642-38868-2_52

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  14 in total

1.  An efficient interlaced multi-shell sampling scheme for reconstruction of diffusion propagators.

Authors:  Wenxing Ye; Sharon Portnoy; Alireza Entezari; Stephen J Blackband; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2012-01-16       Impact factor: 10.048

2.  Q-ball imaging.

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3.  Mapping complex tissue architecture with diffusion spectrum magnetic resonance imaging.

Authors:  Van J Wedeen; Patric Hagmann; Wen-Yih Isaac Tseng; Timothy G Reese; Robert M Weisskoff
Journal:  Magn Reson Med       Date:  2005-12       Impact factor: 4.668

4.  A novel tensor distribution model for the diffusion-weighted MR signal.

Authors:  Bing Jian; Baba C Vemuri; Evren Ozarslan; Paul R Carney; Thomas H Mareci
Journal:  Neuroimage       Date:  2007-05-03       Impact factor: 6.556

5.  Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT).

Authors:  Evren Ozarslan; Timothy M Shepherd; Baba C Vemuri; Stephen J Blackband; Thomas H Mareci
Journal:  Neuroimage       Date:  2006-03-20       Impact factor: 6.556

6.  Estimation of non-negative ODFs using the eigenvalue distribution of spherical functions.

Authors:  Evan Schwab; Bijan Afsari; René Vidal
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

7.  Multiple q-shell diffusion propagator imaging.

Authors:  Maxime Descoteaux; Rachid Deriche; Denis Le Bihan; Jean-François Mangin; Cyril Poupon
Journal:  Med Image Anal       Date:  2010-07-14       Impact factor: 8.545

8.  Estimation of the effective self-diffusion tensor from the NMR spin echo.

Authors:  P J Basser; J Mattiello; D LeBihan
Journal:  J Magn Reson B       Date:  1994-03

9.  AN OVER-COMPLETE DICTIONARY BASED REGULARIZED RECONSTRUCTION OF A FIELD OF ENSEMBLE AVERAGE PROPAGATORS.

Authors:  Wenxing Ye; Baba C Vemuri; Alireza Entezari
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2012-05-02

10.  Parametric dictionary learning for modeling EAP and ODF in diffusion MRI.

Authors:  Sylvain Merlet; Emmanuel Caruyer; Rachid Deriche
Journal:  Med Image Comput Comput Assist Interv       Date:  2012
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  2 in total

1.  Multivariate General Linear Models (MGLM) on Riemannian Manifolds with Applications to Statistical Analysis of Diffusion Weighted Images.

Authors:  Hyunwoo J Kim; Nagesh Adluru; Maxwell D Collins; Moo K Chung; Barbara B Bendlin; Sterling C Johnson; Richard J Davidson; Vikas Singh
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2014-06-23

2.  Fingerprinting Orientation Distribution Functions in diffusion MRI detects smaller crossing angles.

Authors:  Steven H Baete; Martijn A Cloos; Ying-Chia Lin; Dimitris G Placantonakis; Timothy Shepherd; Fernando E Boada
Journal:  Neuroimage       Date:  2019-05-16       Impact factor: 6.556

  2 in total

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