Literature DB >> 24667274

Proton-detected MAS NMR experiments based on dipolar transfers for backbone assignment of highly deuterated proteins.

Veniamin Chevelkov1, Birgit Habenstein1, Antoine Loquet1, Karin Giller1, Stefan Becker1, Adam Lange2.   

Abstract

Proton-detected solid-state NMR was applied to a highly deuterated insoluble, non-crystalline biological assembly, the Salmonella typhimurium type iii secretion system (T3SS) needle. Spectra of very high resolution and sensitivity were obtained at a low protonation level of 10-20% at exchangeable amide positions. We developed efficient experimental protocols for resonance assignment tailored for this system and the employed experimental conditions. Using exclusively dipolar-based interspin magnetization transfers, we recorded two sets of 3D spectra allowing for an almost complete backbone resonance assignment of the needle subunit PrgI. The additional information provided by the well-resolved proton dimension revealed the presence of two sets of resonances in the N-terminal helix of PrgI, while in previous studies employing (13)C detection only a single set of resonances was observed.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Deuteration; Magic-angle spinning solid-state NMR; PrgI; Protein resonance assignment; Proton detection; Type 3 secretion system

Mesh:

Substances:

Year:  2014        PMID: 24667274     DOI: 10.1016/j.jmr.2014.02.020

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  16 in total

1.  Proton detection for signal enhancement in solid-state NMR experiments on mobile species in membrane proteins.

Authors:  Meaghan E Ward; Emily Ritz; Mumdooh A M Ahmed; Vladimir V Bamm; George Harauz; Leonid S Brown; Vladimir Ladizhansky
Journal:  J Biomol NMR       Date:  2015-10-22       Impact factor: 2.835

2.  Sensitivity and resolution of proton detected spectra of a deuterated protein at 40 and 60 kHz magic-angle-spinning.

Authors:  Andrew J Nieuwkoop; W Trent Franks; Kristina Rehbein; Anne Diehl; Ümit Akbey; Frank Engelke; Lyndon Emsley; Guido Pintacuda; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2015-02-08       Impact factor: 2.835

3.  Perspectives for sensitivity enhancement in proton-detected solid-state NMR of highly deuterated proteins by preserving water magnetization.

Authors:  Veniamin Chevelkov; ShengQi Xiang; Karin Giller; Stefan Becker; Adam Lange; Bernd Reif
Journal:  J Biomol NMR       Date:  2015-01-30       Impact factor: 2.835

4.  Selective excitation enables assignment of proton resonances and (1)H-(1)H distance measurement in ultrafast magic angle spinning solid state NMR spectroscopy.

Authors:  Rongchun Zhang; Ayyalusamy Ramamoorthy
Journal:  J Chem Phys       Date:  2015-07-21       Impact factor: 3.488

5.  Towards automatic protein backbone assignment using proton-detected 4D solid-state NMR data.

Authors:  ShengQi Xiang; Veniamin Chevelkov; Stefan Becker; Adam Lange
Journal:  J Biomol NMR       Date:  2014-09-06       Impact factor: 2.835

6.  Dynamics-based selective 2D (1)H/(1)H chemical shift correlation spectroscopy under ultrafast MAS conditions.

Authors:  Rongchun Zhang; Ayyalusamy Ramamoorthy
Journal:  J Chem Phys       Date:  2015-05-28       Impact factor: 3.488

7.  On the problem of resonance assignments in solid state NMR of uniformly ¹⁵N,¹³C-labeled proteins.

Authors:  Robert Tycko
Journal:  J Magn Reson       Date:  2015-04       Impact factor: 2.229

Review 8.  Magic angle spinning NMR of viruses.

Authors:  Caitlin M Quinn; Manman Lu; Christopher L Suiter; Guangjin Hou; Huilan Zhang; Tatyana Polenova
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-02-16       Impact factor: 9.795

9.  A cross-polarization based rotating-frame separated-local-field NMR experiment under ultrafast MAS conditions.

Authors:  Rongchun Zhang; Joshua Damron; Thomas Vosegaard; Ayyalusamy Ramamoorthy
Journal:  J Magn Reson       Date:  2014-11-15       Impact factor: 2.229

10.  Constant-time 2D and 3D through-bond correlation NMR spectroscopy of solids under 60 kHz MAS.

Authors:  Rongchun Zhang; Ayyalusamy Ramamoorthy
Journal:  J Chem Phys       Date:  2016-01-21       Impact factor: 3.488

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