Literature DB >> 24651202

The oxidative inactivation of FeFe hydrogenase reveals the flexibility of the H-cluster.

Vincent Fourmond1, Claudio Greco2, Kateryna Sybirna3, Carole Baffert1, Po-Hung Wang4, Pierre Ezanno1, Marco Montefiori4, Maurizio Bruschi2, Isabelle Meynial-Salles5, Philippe Soucaille5, Jochen Blumberger4, Hervé Bottin3, Luca De Gioia6, Christophe Léger1.   

Abstract

Nature is a valuable source of inspiration in the design of catalysts, and various approaches are used to elucidate the mechanism of hydrogenases, the enzymes that oxidize or produce H2. In FeFe hydrogenases, H2 oxidation occurs at the H-cluster, and catalysis involves H2 binding on the vacant coordination site of an iron centre. Here, we show that the reversible oxidative inactivation of this enzyme results from the binding of H2 to coordination positions that are normally blocked by intrinsic CO ligands. This flexibility of the coordination sphere around the reactive iron centre confers on the enzyme the ability to avoid harmful reactions under oxidizing conditions, including exposure to O2. The versatile chemistry of the diiron cluster in the natural system might inspire the design of novel synthetic catalysts for H2 oxidation.

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Year:  2014        PMID: 24651202     DOI: 10.1038/nchem.1892

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  40 in total

1.  GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation.

Authors:  Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl
Journal:  J Chem Theory Comput       Date:  2008-03       Impact factor: 6.006

2.  The crystal structure of an oxygen-tolerant hydrogenase uncovers a novel iron-sulphur centre.

Authors:  Johannes Fritsch; Patrick Scheerer; Stefan Frielingsdorf; Sebastian Kroschinsky; Bärbel Friedrich; Oliver Lenz; Christian M T Spahn
Journal:  Nature       Date:  2011-10-16       Impact factor: 49.962

Review 3.  Structure/function relationships of [NiFe]- and [FeFe]-hydrogenases.

Authors:  Juan C Fontecilla-Camps; Anne Volbeda; Christine Cavazza; Yvain Nicolet
Journal:  Chem Rev       Date:  2007-09-13       Impact factor: 60.622

Review 4.  Occurrence, classification, and biological function of hydrogenases: an overview.

Authors:  Paulette M Vignais; Bernard Billoud
Journal:  Chem Rev       Date:  2007-10       Impact factor: 60.622

5.  Density-functional exchange-energy approximation with correct asymptotic behavior.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1988-09-15

6.  Mechanistic and physiological implications of the interplay among iron-sulfur clusters in [FeFe]-hydrogenases. A QM/MM perspective.

Authors:  Claudio Greco; Maurizio Bruschi; Piercarlo Fantucci; Ulf Ryde; Luca De Gioia
Journal:  J Am Chem Soc       Date:  2011-10-26       Impact factor: 15.419

7.  Importance of the protein framework for catalytic activity of [FeFe]-hydrogenases.

Authors:  Philipp Knörzer; Alexey Silakov; Carina E Foster; Fraser A Armstrong; Wolfgang Lubitz; Thomas Happe
Journal:  J Biol Chem       Date:  2011-11-22       Impact factor: 5.157

8.  An iron complex with pendent amines as a molecular electrocatalyst for oxidation of hydrogen.

Authors:  Tianbiao Liu; Daniel L Dubois; R Morris Bullock
Journal:  Nat Chem       Date:  2013-02-17       Impact factor: 24.427

9.  Density functional theory investigation of the active site of [Fe]-hydrogenases: effects of redox state and ligand characteristics on structural, electronic, and reactivity properties of complexes related to the [2Fe]H subcluster.

Authors:  Maurizio Bruschi; Piercarlo Fantucci; Luca De Gioia
Journal:  Inorg Chem       Date:  2003-07-28       Impact factor: 5.165

10.  Shewanella oneidensis: a new and efficient system for expression and maturation of heterologous [Fe-Fe] hydrogenase from Chlamydomonas reinhardtii.

Authors:  Kateryna Sybirna; Tatiana Antoine; Pia Lindberg; Vincent Fourmond; Marc Rousset; Vincent Méjean; Hervé Bottin
Journal:  BMC Biotechnol       Date:  2008-09-18       Impact factor: 2.563

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  15 in total

1.  Characterization of [FeFe] Hydrogenase O2 Sensitivity Using a New, Physiological Approach.

Authors:  Jamin Koo; Stacey Shiigi; Marcus Rohovie; Kunal Mehta; James R Swartz
Journal:  J Biol Chem       Date:  2016-07-19       Impact factor: 5.157

2.  Stepwise isotope editing of [FeFe]-hydrogenases exposes cofactor dynamics.

Authors:  Moritz Senger; Stefan Mebs; Jifu Duan; Florian Wittkamp; Ulf-Peter Apfel; Joachim Heberle; Michael Haumann; Sven Timo Stripp
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-18       Impact factor: 11.205

3.  The final steps of [FeFe]-hydrogenase maturation.

Authors:  Oliver Lampret; Julian Esselborn; Rieke Haas; Andreas Rutz; Rosalind L Booth; Leonie Kertess; Florian Wittkamp; Clare F Megarity; Fraser A Armstrong; Martin Winkler; Thomas Happe
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-23       Impact factor: 11.205

4.  A redox hydrogel protects hydrogenase from high-potential deactivation and oxygen damage.

Authors:  Nicolas Plumeré; Olaf Rüdiger; Alaa Alsheikh Oughli; Rhodri Williams; Jeevanthi Vivekananthan; Sascha Pöller; Wolfgang Schuhmann; Wolfgang Lubitz
Journal:  Nat Chem       Date:  2014-08-03       Impact factor: 24.427

5.  Mechanism of O2 diffusion and reduction in FeFe hydrogenases.

Authors:  Adam Kubas; Christophe Orain; David De Sancho; Laure Saujet; Matteo Sensi; Charles Gauquelin; Isabelle Meynial-Salles; Philippe Soucaille; Hervé Bottin; Carole Baffert; Vincent Fourmond; Robert B Best; Jochen Blumberger; Christophe Léger
Journal:  Nat Chem       Date:  2016-08-22       Impact factor: 24.427

6.  Borane-protected cyanides as surrogates of H-bonded cyanides in [FeFe]-hydrogenase active site models.

Authors:  Brian C Manor; Mark R Ringenberg; Thomas B Rauchfuss
Journal:  Inorg Chem       Date:  2014-07-03       Impact factor: 5.165

7.  The roles of long-range proton-coupled electron transfer in the directionality and efficiency of [FeFe]-hydrogenases.

Authors:  Oliver Lampret; Jifu Duan; Eckhard Hofmann; Martin Winkler; Fraser A Armstrong; Thomas Happe
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-13       Impact factor: 11.205

8.  [FeFe]-hydrogenase abundance and diversity along a vertical redox gradient in Great Salt Lake, USA.

Authors:  Eric S Boyd; Trinity L Hamilton; Kevin D Swanson; Alta E Howells; Bonnie K Baxter; Jonathan E Meuser; Matthew C Posewitz; John W Peters
Journal:  Int J Mol Sci       Date:  2014-11-28       Impact factor: 5.923

9.  Characterization of a putative sensory [FeFe]-hydrogenase provides new insight into the role of the active site architecture.

Authors:  Henrik Land; Alina Sekretareva; Ping Huang; Holly J Redman; Brigitta Németh; Nakia Polidori; Lívia S Mészáros; Moritz Senger; Sven T Stripp; Gustav Berggren
Journal:  Chem Sci       Date:  2020-09-21       Impact factor: 9.825

10.  Lyophilization protects [FeFe]-hydrogenases against O2-induced H-cluster degradation.

Authors:  Jens Noth; Ramona Kositzki; Kathrin Klein; Martin Winkler; Michael Haumann; Thomas Happe
Journal:  Sci Rep       Date:  2015-09-14       Impact factor: 4.379

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