Literature DB >> 27435671

Characterization of [FeFe] Hydrogenase O2 Sensitivity Using a New, Physiological Approach.

Jamin Koo1, Stacey Shiigi2, Marcus Rohovie1, Kunal Mehta2, James R Swartz3,2.   

Abstract

[FeFe] hydrogenases catalyze rapid H2 production but are highly O2-sensitive. Developing O2-tolerant enzymes is needed for sustainable H2 production technologies, but the lack of a quantitative and predictive assay for O2 tolerance has impeded progress. We describe a new approach to provide quantitative assessment of O2 sensitivity by using an assay employing ferredoxin NADP+ reductase (FNR) to transfer electrons from NADPH to hydrogenase via ferredoxins (Fd). Hydrogenase inactivation is measured during H2 production in an O2-containing environment. An alternative assay uses dithionite (DTH) to provide reduced Fd. This second assay measures the remaining hydrogenase activity in periodic samples taken from the NADPH-driven reaction solutions. The second assay validates the more convenient NADPH-driven assay, which better mimics physiological conditions. During development of the NADPH-driven assay and while characterizing the Clostridium pasteurianum (Cp) [FeFe] hydrogenase, CpI, we detected significant rates of direct electron loss from reduced Fd to O2 However, this loss does not interfere with measurement of first order hydrogenase inactivation, providing rate constants insensitive to initial hydrogenase concentration. We show increased activity and O2 tolerance for a protein fusion between Cp ferredoxin (CpFd) and CpI mediated by a 15-amino acid linker but not for a longer linker. We suggest that this precise, solution phase assay for [FeFe] hydrogenase O2 sensitivity and the insights we provide constitute an important advance toward the discovery of the O2-tolerant [FeFe] hydrogenases required for photosynthetic, biological H2 production.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  enzyme inactivation; enzyme kinetics; fusion protein; hydrogenase; metalloprotein

Mesh:

Substances:

Year:  2016        PMID: 27435671      PMCID: PMC5076827          DOI: 10.1074/jbc.M116.737122

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  21 in total

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Authors:  Patrick C Hallenbeck; Mona Abo-Hashesh; Dipankar Ghosh
Journal:  Bioresour Technol       Date:  2012-01-28       Impact factor: 9.642

2.  The generation of superoixide radical during the autoxidation of ferredoxins.

Authors:  H P Misra; I Fridovich
Journal:  J Biol Chem       Date:  1971-11-25       Impact factor: 5.157

3.  Importance of the protein framework for catalytic activity of [FeFe]-hydrogenases.

Authors:  Philipp Knörzer; Alexey Silakov; Carina E Foster; Fraser A Armstrong; Wolfgang Lubitz; Thomas Happe
Journal:  J Biol Chem       Date:  2011-11-22       Impact factor: 5.157

Review 4.  Hydrogenases for biological hydrogen production.

Authors:  Dong-Hoon Kim; Mi-Sun Kim
Journal:  Bioresour Technol       Date:  2011-03-05       Impact factor: 9.642

5.  [FeFe]-hydrogenase-catalyzed H2 production in a photoelectrochemical biofuel cell.

Authors:  Michael Hambourger; Miguel Gervaldo; Drazenka Svedruzic; Paul W King; Devens Gust; Maria Ghirardi; Ana L Moore; Thomas A Moore
Journal:  J Am Chem Soc       Date:  2008-01-19       Impact factor: 15.419

6.  Electrochemical kinetic investigations of the reactions of [FeFe]-hydrogenases with carbon monoxide and oxygen: comparing the importance of gas tunnels and active-site electronic/redox effects.

Authors:  Gabrielle Goldet; Caterina Brandmayr; Sven T Stripp; Thomas Happe; Christine Cavazza; Juan C Fontecilla-Camps; Fraser A Armstrong
Journal:  J Am Chem Soc       Date:  2009-10-21       Impact factor: 15.419

7.  Complete activity profile of Clostridium acetobutylicum [FeFe]-hydrogenase and kinetic parameters for endogenous redox partners.

Authors:  Marie Demuez; Laurent Cournac; Olivier Guerrini; Philippe Soucaille; Laurence Girbal
Journal:  FEMS Microbiol Lett       Date:  2007-08-06       Impact factor: 2.742

8.  Cell-free synthesis and maturation of [FeFe] hydrogenases.

Authors:  Marcus E Boyer; James A Stapleton; Jon M Kuchenreuther; Chia-Wei Wang; James R Swartz
Journal:  Biotechnol Bioeng       Date:  2008-01-01       Impact factor: 4.530

9.  Electrochemical definitions of O2 sensitivity and oxidative inactivation in hydrogenases.

Authors:  Kylie A Vincent; Alison Parkin; Oliver Lenz; Simon P J Albracht; Juan C Fontecilla-Camps; Richard Cammack; Bärbel Friedrich; Fraser A Armstrong
Journal:  J Am Chem Soc       Date:  2005-12-28       Impact factor: 15.419

10.  Oxygen-tolerant [NiFe]-hydrogenases: the individual and collective importance of supernumerary cysteines at the proximal Fe-S cluster.

Authors:  Michael J Lukey; Maxie M Roessler; Alison Parkin; Rhiannon M Evans; Rosalind A Davies; Oliver Lenz; Baerbel Friedrich; Frank Sargent; Fraser A Armstrong
Journal:  J Am Chem Soc       Date:  2011-10-04       Impact factor: 15.419

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  1 in total

1.  Investigation of the Ferredoxin's Influence on the Anaerobic and Aerobic, Enzymatic H2 Production.

Authors:  Jamin Koo; Yeeun Cha
Journal:  Front Bioeng Biotechnol       Date:  2021-02-26
  1 in total

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