Literature DB >> 31337676

The final steps of [FeFe]-hydrogenase maturation.

Oliver Lampret1, Julian Esselborn1, Rieke Haas1, Andreas Rutz1, Rosalind L Booth2, Leonie Kertess1, Florian Wittkamp3, Clare F Megarity2, Fraser A Armstrong2, Martin Winkler1, Thomas Happe4.   

Abstract

The active site (H-cluster) of [FeFe]-hydrogenases is a blueprint for the design of a biologically inspired H2-producing catalyst. The maturation process describes the preassembly and uptake of the unique [2FeH] cluster into apo-hydrogenase, which is to date not fully understood. In this study, we targeted individual amino acids by site-directed mutagenesis in the [FeFe]-hydrogenase CpI of Clostridium pasteurianum to reveal the final steps of H-cluster maturation occurring within apo-hydrogenase. We identified putative key positions for cofactor uptake and the subsequent structural reorganization that stabilizes the [2FeH] cofactor in its functional coordination sphere. Our results suggest that functional integration of the negatively charged [2FeH] precursor requires the positive charges and individual structural features of the 2 basic residues of arginine 449 and lysine 358, which mark the entrance and terminus of the maturation channel, respectively. The results obtained for 5 glycine-to-histidine exchange variants within a flexible loop region provide compelling evidence that the glycine residues function as hinge positions in the refolding process, which closes the secondary ligand sphere of the [2FeH] cofactor and the maturation channel. The conserved structural motifs investigated here shed light on the interplay between the secondary ligand sphere and catalytic cofactor.

Entities:  

Keywords:  catalyst; hydrogenase; maturation; organometallic cofactor; redox enzymes

Year:  2019        PMID: 31337676      PMCID: PMC6689974          DOI: 10.1073/pnas.1908121116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  53 in total

1.  Structure of a cofactor-deficient nitrogenase MoFe protein.

Authors:  Benedikt Schmid; Markus W Ribbe; Oliver Einsle; Mika Yoshida; Leonard M Thomas; Dennis R Dean; Douglas C Rees; Barbara K Burgess
Journal:  Science       Date:  2002-04-12       Impact factor: 47.728

2.  Unsaturated, mixed-valence diiron dithiolate model for the H(ox) state of the [FeFe] hydrogenase.

Authors:  Aaron K Justice; Thomas B Rauchfuss; Scott R Wilson
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

3.  Biochemical characterization of the HydE and HydG iron-only hydrogenase maturation enzymes from Thermatoga maritima.

Authors:  Jon K Rubach; Xavier Brazzolotto; Jacques Gaillard; Marc Fontecave
Journal:  FEBS Lett       Date:  2005-09-12       Impact factor: 4.124

4.  A density functional theory study on the active center of Fe-only hydrogenase: characterization and electronic structure of the redox states.

Authors:  Zhi-Pan Liu; P Hu
Journal:  J Am Chem Soc       Date:  2002-05-08       Impact factor: 15.419

5.  Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center.

Authors:  Y Nicolet; C Piras; P Legrand; C E Hatchikian; J C Fontecilla-Camps
Journal:  Structure       Date:  1999-01-15       Impact factor: 5.006

6.  The organometallic active site of [Fe]hydrogenase: models and entatic states.

Authors:  Marcetta Y Darensbourg; Erica J Lyon; Xuan Zhao; Irene P Georgakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-17       Impact factor: 11.205

7.  Discovery of two novel radical S-adenosylmethionine proteins required for the assembly of an active [Fe] hydrogenase.

Authors:  Matthew C Posewitz; Paul W King; Sharon L Smolinski; Liping Zhang; Michael Seibert; Maria L Ghirardi
Journal:  J Biol Chem       Date:  2004-04-13       Impact factor: 5.157

8.  A mixed-valent, Fe(II)Fe(I), diiron complex reproduces the unique rotated state of the [FeFe]hydrogenase active site.

Authors:  Tianbiao Liu; Marcetta Y Darensbourg
Journal:  J Am Chem Soc       Date:  2007-05-11       Impact factor: 15.419

9.  The electronic structure of the H-cluster in the [FeFe]-hydrogenase from Desulfovibrio desulfuricans: a Q-band 57Fe-ENDOR and HYSCORE study.

Authors:  Alexey Silakov; Eduard J Reijerse; Simon P J Albracht; E Claude Hatchikian; Wolfgang Lubitz
Journal:  J Am Chem Soc       Date:  2007-08-28       Impact factor: 15.419

10.  Molecular insights into nitrogenase FeMoco insertion--the role of His 274 and His 451 of MoFe protein alpha subunit.

Authors:  Aaron W Fay; Yilin Hu; Benedikt Schmid; Markus W Ribbe
Journal:  J Inorg Biochem       Date:  2007-04-19       Impact factor: 4.155

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  6 in total

Review 1.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

2.  The roles of long-range proton-coupled electron transfer in the directionality and efficiency of [FeFe]-hydrogenases.

Authors:  Oliver Lampret; Jifu Duan; Eckhard Hofmann; Martin Winkler; Fraser A Armstrong; Thomas Happe
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-13       Impact factor: 11.205

3.  [FeFe]-hydrogenase maturation: H-cluster assembly intermediates tracked by electron paramagnetic resonance, infrared, and X-ray absorption spectroscopy.

Authors:  Brigitta Németh; Moritz Senger; Holly J Redman; Pierre Ceccaldi; Joan Broderick; Ann Magnuson; Sven T Stripp; Michael Haumann; Gustav Berggren
Journal:  J Biol Inorg Chem       Date:  2020-07-13       Impact factor: 3.358

4.  The maturase HydF enables [FeFe] hydrogenase assembly via transient, cofactor-dependent interactions.

Authors:  Brigitta Németh; Henrik Land; Ann Magnuson; Anders Hofer; Gustav Berggren
Journal:  J Biol Chem       Date:  2020-07-03       Impact factor: 5.157

Review 5.  Heterologous Hydrogenase Overproduction Systems for Biotechnology-An Overview.

Authors:  Qin Fan; Peter Neubauer; Oliver Lenz; Matthias Gimpel
Journal:  Int J Mol Sci       Date:  2020-08-16       Impact factor: 5.923

6.  A safety cap protects hydrogenase from oxygen attack.

Authors:  Martin Winkler; Jifu Duan; Andreas Rutz; Christina Felbek; Lisa Scholtysek; Oliver Lampret; Jan Jaenecke; Ulf-Peter Apfel; Gianfranco Gilardi; Francesca Valetti; Vincent Fourmond; Eckhard Hofmann; Christophe Léger; Thomas Happe
Journal:  Nat Commun       Date:  2021-02-02       Impact factor: 14.919

  6 in total

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