Literature DB >> 24646570

Designer microbes for biosynthesis.

Maureen B Quin1, Claudia Schmidt-Dannert2.   

Abstract

Microbes have long been adapted for the biosynthetic production of useful compounds. There is increasing demand for the rapid and cheap microbial production of diverse molecules in an industrial setting. Microbes can now be designed and engineered for a particular biosynthetic purpose, thanks to recent developments in genome sequencing, metabolic engineering, and synthetic biology. Advanced tools exist for the genetic manipulation of microbes to create novel metabolic circuits, making new products accessible. Metabolic processes can be optimized to increase yield and balance pathway flux. Progress is being made towards the design and creation of fully synthetic microbes for biosynthetic purposes. Together, these emerging technologies will facilitate the production of designer microbes for biosynthesis.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24646570      PMCID: PMC4165810          DOI: 10.1016/j.copbio.2014.02.014

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  72 in total

1.  Model-driven engineering of RNA devices to quantitatively program gene expression.

Authors:  James M Carothers; Jonathan A Goler; Darmawi Juminaga; Jay D Keasling
Journal:  Science       Date:  2011-12-23       Impact factor: 47.728

2.  Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome.

Authors:  Masayuki Hashimoto; Toshiharu Ichimura; Hiroshi Mizoguchi; Kimie Tanaka; Kazuyuki Fujimitsu; Kenji Keyamura; Tomotake Ote; Takehiro Yamakawa; Yukiko Yamazaki; Hideo Mori; Tsutomu Katayama; Jun-ichi Kato
Journal:  Mol Microbiol       Date:  2005-01       Impact factor: 3.501

3.  Genomics-driven discovery of PKS-NRPS hybrid metabolites from Aspergillus nidulans.

Authors:  Sebastian Bergmann; Julia Schümann; Kirstin Scherlach; Corinna Lange; Axel A Brakhage; Christian Hertweck
Journal:  Nat Chem Biol       Date:  2007-03-18       Impact factor: 15.040

Review 4.  Genomic mining--a concept for the discovery of new bioactive natural products.

Authors:  Harald Gross
Journal:  Curr Opin Drug Discov Devel       Date:  2009-03

5.  Multivariate modular metabolic engineering of Escherichia coli to produce resveratrol from L-tyrosine.

Authors:  Junjun Wu; Peiran Liu; Yongming Fan; Han Bao; Guocheng Du; Jingwen Zhou; Jian Chen
Journal:  J Biotechnol       Date:  2013-07-31       Impact factor: 3.307

Review 6.  Microbial natural products: molecular blueprints for antitumor drugs.

Authors:  Lesley-Ann Giddings; David J Newman
Journal:  J Ind Microbiol Biotechnol       Date:  2013-09-03       Impact factor: 3.346

7.  Programming cells by multiplex genome engineering and accelerated evolution.

Authors:  Harris H Wang; Farren J Isaacs; Peter A Carr; Zachary Z Sun; George Xu; Craig R Forest; George M Church
Journal:  Nature       Date:  2009-07-26       Impact factor: 49.962

8.  Bottom-up genome assembly using the Bacillus subtilis genome vector.

Authors:  Mitsuhiro Itaya; Kyoko Fujita; Azusa Kuroki; Kenji Tsuge
Journal:  Nat Methods       Date:  2007-12-09       Impact factor: 28.547

9.  Modular optimization of multi-gene pathways for fatty acids production in E. coli.

Authors:  Peng Xu; Qin Gu; Wenya Wang; Lynn Wong; Adam G W Bower; Cynthia H Collins; Mattheos A G Koffas
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

10.  DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways.

Authors:  Zengyi Shao; Hua Zhao; Huimin Zhao
Journal:  Nucleic Acids Res       Date:  2008-12-12       Impact factor: 16.971

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  9 in total

Review 1.  Synthetic Biology of Natural Products.

Authors:  Rainer Breitling; Eriko Takano
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-10-03       Impact factor: 10.005

2.  Microbial production strategies and applications of lycopene and other terpenoids.

Authors:  Tian Ma; Zixin Deng; Tiangang Liu
Journal:  World J Microbiol Biotechnol       Date:  2015-12-29       Impact factor: 3.312

Review 3.  Engineered biosynthesis of natural products in heterologous hosts.

Authors:  Yunzi Luo; Bing-Zhi Li; Duo Liu; Lu Zhang; Yan Chen; Bin Jia; Bo-Xuan Zeng; Huimin Zhao; Ying-Jin Yuan
Journal:  Chem Soc Rev       Date:  2015-05-11       Impact factor: 54.564

4.  Escherichia coli enoyl-acyl carrier protein reductase (FabI) supports efficient operation of a functional reversal of β-oxidation cycle.

Authors:  Jacob E Vick; James M Clomburg; Matthew D Blankschien; Alexander Chou; Seohyoung Kim; Ramon Gonzalez
Journal:  Appl Environ Microbiol       Date:  2015-02       Impact factor: 4.792

Review 5.  Genome Mining as New Challenge in Natural Products Discovery.

Authors:  Luisa Albarano; Roberta Esposito; Nadia Ruocco; Maria Costantini
Journal:  Mar Drugs       Date:  2020-04-09       Impact factor: 5.118

6.  Cloning, expression and characterization of a novel cold-active and organic solvent-tolerant esterase from Monascus ruber M7.

Authors:  Hailun Guo; Yan Zhang; Yanchun Shao; Wanping Chen; Fusheng Chen; Mu Li
Journal:  Extremophiles       Date:  2016-05-21       Impact factor: 2.395

Review 7.  In vitro reconstitution guide for targeted synthetic metabolism of chemicals, nutraceuticals and drug precursors.

Authors:  Gao-Yi Tan; Faying Zhu; Zixin Deng; Tiangang Liu
Journal:  Synth Syst Biotechnol       Date:  2016-04-01

8.  In vivo plug-and-play: a modular multi-enzyme single-cell catalyst for the asymmetric amination of ketoacids and ketones.

Authors:  Judith E Farnberger; Elisabeth Lorenz; Nina Richter; Volker F Wendisch; Wolfgang Kroutil
Journal:  Microb Cell Fact       Date:  2017-07-28       Impact factor: 5.328

Review 9.  Regulation of Nuclear Factor Kappa-Light-Chain-Enhancer of Activated B Cells (NF-κβ) in Inflammatory Bowel Diseases.

Authors:  Deenaz Zaidi; Eytan Wine
Journal:  Front Pediatr       Date:  2018-10-30       Impact factor: 3.418

  9 in total

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