Literature DB >> 24632473

PSF contacts exon 7 of SMN2 pre-mRNA to promote exon 7 inclusion.

Sunghee Cho1, Heegyum Moon1, Tiing Jen Loh1, Hyun Kyung Oh1, Darren Reese Williams1, D Joshua Liao2, Jianhua Zhou3, Michael R Green4, Xuexiu Zheng1, Haihong Shen5.   

Abstract

Spinal muscular atrophy (SMA) is an autosomal recessive genetic disease and a leading cause of infant mortality. Deletions or mutations of SMN1 cause SMA, a gene that encodes a SMN protein. SMN is important for the assembly of Sm proteins onto UsnRNA to UsnRNP. SMN has also been suggested to direct axonal transport of β-actin mRNA in neurons. Humans contain a second SMN gene called SMN2 thus SMA patients produce some SMN but not with sufficient levels. The majority of SMN2 mRNA does not include exon 7. Here we show that increased expression of PSF promotes inclusion of exon 7 in the SMN2 whereas reduced expression of PSF promotes exon 7 skipping. In addition, we present evidence showing that PSF interacts with the GAAGGA enhancer in exon 7. We also demonstrate that a mutation in this enhancer abolishes the effects of PSF on exon 7 splicing. Furthermore we show that the RNA target sequences of PSF and tra2β in exon 7 are partially overlapped. These results lead us to conclude that PSF interacts with an enhancer in exon 7 to promote exon 7 splicing of SMN2 pre-mRNA.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Enhancer; Exon 7 splicing; PSF; RNA splicing; Spinal muscular atrophy

Mesh:

Substances:

Year:  2014        PMID: 24632473      PMCID: PMC4542050          DOI: 10.1016/j.bbagrm.2014.03.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  47 in total

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4.  Role for PSF in mediating transcriptional activator-dependent stimulation of pre-mRNA processing in vivo.

Authors:  Emanuel Rosonina; Joanna Y Y Ip; John A Calarco; Malina A Bakowski; Andrew Emili; Susan McCracken; Philip Tucker; C James Ingles; Benjamin J Blencowe
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

5.  SRp30c-dependent stimulation of survival motor neuron (SMN) exon 7 inclusion is facilitated by a direct interaction with hTra2 beta 1.

Authors:  Philip J Young; Christine J DiDonato; Diane Hu; Rashmi Kothary; Elliot J Androphy; Christian L Lorson
Journal:  Hum Mol Genet       Date:  2002-03-01       Impact factor: 6.150

6.  A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy.

Authors:  Tsuyoshi Kashima; James L Manley
Journal:  Nat Genet       Date:  2003-08       Impact factor: 38.330

7.  Transcriptional activity of androgen receptor is modulated by two RNA splicing factors, PSF and p54nrb.

Authors:  Xuesen Dong; Joan Sweet; John R G Challis; Theodore Brown; Stephen J Lye
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8.  Regulation of SMN protein stability.

Authors:  Barrington G Burnett; Eric Muñoz; Animesh Tandon; Deborah Y Kwon; Charlotte J Sumner; Kenneth H Fischbeck
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10.  Enhancement of SMN2 exon 7 inclusion by antisense oligonucleotides targeting the exon.

Authors:  Yimin Hua; Timothy A Vickers; Brenda F Baker; C Frank Bennett; Adrian R Krainer
Journal:  PLoS Biol       Date:  2007-04       Impact factor: 8.029

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  16 in total

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2.  Splicing regulation in spinal muscular atrophy by an RNA structure formed by long-distance interactions.

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3.  High-throughput analysis revealed mutations' diverging effects on SMN1 exon 7 splicing.

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4.  Caenorhabditis elegans NONO-1: Insights into DBHS protein structure, architecture, and function.

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Review 5.  Mechanism of Splicing Regulation of Spinal Muscular Atrophy Genes.

Authors:  Ravindra N Singh; Natalia N Singh
Journal:  Adv Neurobiol       Date:  2018

6.  A rare variant (c.863G>T) in exon 7 of SMN1 disrupts mRNA splicing and is responsible for spinal muscular atrophy.

Authors:  Yu-Jin Qu; Jin-Li Bai; Yan-Yan Cao; Wen-Hui Zhang; Hong Wang; Yu-Wei Jin; Fang Song
Journal:  Eur J Hum Genet       Date:  2015-09-30       Impact factor: 4.246

Review 7.  Invited review: decoding the pathophysiological mechanisms that underlie RNA dysregulation in neurodegenerative disorders: a review of the current state of the art.

Authors:  Matthew J Walsh; Johnathan Cooper-Knock; Jennifer E Dodd; Matthew J Stopford; Simeon R Mihaylov; Janine Kirby; Pamela J Shaw; Guillaume M Hautbergue
Journal:  Neuropathol Appl Neurobiol       Date:  2015-02       Impact factor: 8.090

Review 8.  PSF: nuclear busy-body or nuclear facilitator?

Authors:  Christopher A Yarosh; Joseph R Iacona; Carol S Lutz; Kristen W Lynch
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-04-01       Impact factor: 9.957

9.  Targeting SR proteins improves SMN expression in spinal muscular atrophy cells.

Authors:  Claribel D Wee; Mallory A Havens; Francine M Jodelka; Michelle L Hastings
Journal:  PLoS One       Date:  2014-12-15       Impact factor: 3.240

10.  The DBHS proteins SFPQ, NONO and PSPC1: a multipurpose molecular scaffold.

Authors:  Gavin J Knott; Charles S Bond; Archa H Fox
Journal:  Nucleic Acids Res       Date:  2016-04-15       Impact factor: 16.971

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