Literature DB >> 24619904

Nutri-informatics: a new kid on the block?

Frank Döring1, Gerald Rimbach.   

Abstract

From an epistemological point of view, nutritional physiology has been developed, like other factual sciences such as physics, from a purely descriptive to a mechanismic-explanatory scientific discipline. Nowadays, nutritional physiology has entered the molecular stage. Based on this micro-reductionism, molecular targets (e.g., transcription factors) of energy intake, certain nutrients (e.g., zinc) and selected plant bioactives (e.g., flavonoids) have been identified. Although these results are impressive, molecular approaches in nutritional physiology are limited by nature since the molecular targets of nutrients seem to have no ontic priority to understand the nutritional phenotype of an organism. Here we define, to the best of our knowledge, for the first time Nutri-informatics as a new bioinformatics discipline integrating large-scale data sets from nutritional studies into a stringent nutritional systems biology context. We suggest that Nutri-informatics, as an emerging field, may bridge the gap between nutritional biochemistry, nutritional physiology and metabolism to understand the interactions between an organism and its environment.

Entities:  

Year:  2014        PMID: 24619904      PMCID: PMC4026429          DOI: 10.1007/s12263-014-0394-6

Source DB:  PubMed          Journal:  Genes Nutr        ISSN: 1555-8932            Impact factor:   5.523


  19 in total

1.  Effect of selenium and vitamin E deficiency on differential gene expression in rat liver.

Authors:  A Fischer; J Pallauf; K Gohil; S U Weber; L Packer; G Rimbach
Journal:  Biochem Biophys Res Commun       Date:  2001-07-13       Impact factor: 3.575

2.  Genes regulated by caloric restriction have unique roles within transcriptional networks.

Authors:  William R Swindell
Journal:  Mech Ageing Dev       Date:  2008-06-27       Impact factor: 5.432

Review 3.  Online tools for bioinformatics analyses in nutrition sciences.

Authors:  Sridhar A Malkaram; Yousef I Hassan; Janos Zempleni
Journal:  Adv Nutr       Date:  2012-09-01       Impact factor: 8.701

4.  Changes in rat hepatic gene expression in response to zinc deficiency as assessed by DNA arrays.

Authors:  Heike tom Dieck; Frank Döring; Hans-Peter Roth; Hannelore Daniel
Journal:  J Nutr       Date:  2003-04       Impact factor: 4.798

5.  Effect of quercetin and its metabolites isorhamnetin and quercetin-3-glucuronide on inflammatory gene expression: role of miR-155.

Authors:  Christine Boesch-Saadatmandi; Agnieszka Loboda; Anika E Wagner; Anna Stachurska; Alicja Jozkowicz; Jozef Dulak; Frank Döring; Siegfried Wolffram; Gerald Rimbach
Journal:  J Nutr Biochem       Date:  2010-06-25       Impact factor: 6.048

6.  Vitamin E dependent microRNA regulation in rat liver.

Authors:  Sonja Gaedicke; Xiangnan Zhang; Constance Schmelzer; Yijia Lou; Frank Doering; Jan Frank; Gerald Rimbach
Journal:  FEBS Lett       Date:  2008-09-24       Impact factor: 4.124

7.  Challenges of molecular nutrition research 6: the nutritional phenotype database to store, share and evaluate nutritional systems biology studies.

Authors:  Ben van Ommen; Jildau Bouwman; Lars O Dragsted; Christian A Drevon; Ruan Elliott; Philip de Groot; Jim Kaput; John C Mathers; Michael Müller; Fre Pepping; Jahn Saito; Augustin Scalbert; Marijana Radonjic; Philippe Rocca-Serra; Anthony Travis; Suzan Wopereis; Chris T Evelo
Journal:  Genes Nutr       Date:  2010-02-03       Impact factor: 5.523

8.  The challenges for molecular nutrition research 3: comparative nutrigenomics research as a basis for entering the systems level.

Authors:  Hannelore Daniel; Christian A Drevon; Ulla I Klein; Robert Kleemann; Ben van Ommen
Journal:  Genes Nutr       Date:  2008-10-01       Impact factor: 5.523

9.  In silico evidence for gluconeogenesis from fatty acids in humans.

Authors:  Christoph Kaleta; Luís F de Figueiredo; Sarah Werner; Reinhard Guthke; Michael Ristow; Stefan Schuster
Journal:  PLoS Comput Biol       Date:  2011-07-21       Impact factor: 4.475

Review 10.  Molecular nutrition research: the modern way of performing nutritional science.

Authors:  Frode Norheim; Ingrid Merethe Fange Gjelstad; Marit Hjorth; Kathrine J Vinknes; Torgrim M Langleite; Torgeir Holen; Jørgen Jensen; Knut Tomas Dalen; Anette S Karlsen; Anders Kielland; Arild C Rustan; Christian A Drevon
Journal:  Nutrients       Date:  2012-12-03       Impact factor: 5.717

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  3 in total

1.  Zinc proteome interaction network as a model to identify nutrient-affected pathways in human pathologies.

Authors:  Guido Leoni; Antonio Rosato; Giuditta Perozzi; Chiara Murgia
Journal:  Genes Nutr       Date:  2014-11-04       Impact factor: 5.523

2.  Nutritional biology: a neglected basic discipline of nutritional science.

Authors:  Frank Döring; Alexander Ströhle
Journal:  Genes Nutr       Date:  2015-11-19       Impact factor: 5.523

Review 3.  The landscape of nutri-informatics: a review of current resources and challenges for integrative nutrition research.

Authors:  Lauren Chan; Nicole Vasilevsky; Anne Thessen; Julie McMurry; Melissa Haendel
Journal:  Database (Oxford)       Date:  2021-01-25       Impact factor: 3.451

  3 in total

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