Literature DB >> 24567408

A propagating ATPase gradient drives transport of surface-confined cellular cargo.

Anthony G Vecchiarelli1, Keir C Neuman, Kiyoshi Mizuuchi.   

Abstract

The faithful segregation of duplicated genetic material into daughter cells is critical to all organisms. In many bacteria, the segregation of chromosomes involves transport of "centromere-like" loci over the main body of the chromosome, the nucleoid, mediated by a two-protein partition system: a nonspecific DNA-binding ATPase, ParA, and an ATPase stimulator, ParB, which binds to the centromere-like loci. These systems have previously been proposed to function through a filament-based mechanism, analogous to actin- or microtubule-based movement. Here, we reconstituted the F-plasmid partition system using a DNA-carpeted flow cell as an artificial nucleoid surface and magnetic beads coated with plasmid partition complexes as surface-confined cargo. This minimal system recapitulated directed cargo motion driven by a surface ATPase gradient that propagated with the cargo. The dynamics are consistent with a diffusion-ratchet model, whereby the cargo dynamically establishes, and interacts with, a concentration gradient of the ATPase. A chemophoresis force ensues as the cargo perpetually chases the ATPase gradient, allowing the cargo to essentially "surf" the nucleoid on a continuously traveling wave of the ATPase. Demonstration of this non-filament-based motility mechanism in a biological context establishes a distinct class of motor system used for the transport and positioning of large cellular cargo.

Entities:  

Keywords:  ParA ATPase; bacterial chromosome segregation; protein gradients; spatial organization

Mesh:

Substances:

Year:  2014        PMID: 24567408      PMCID: PMC3977271          DOI: 10.1073/pnas.1401025111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

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Authors:  Whitman B Schofield; Hoong Chuin Lim; Christine Jacobs-Wagner
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2.  Reconstitution of DNA segregation driven by assembly of a prokaryotic actin homolog.

Authors:  Ethan C Garner; Christopher S Campbell; Douglas B Weibel; R Dyche Mullins
Journal:  Science       Date:  2007-03-02       Impact factor: 47.728

3.  Dual role of DNA in regulating ATP hydrolysis by the SopA partition protein.

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Journal:  J Biol Chem       Date:  2009-09-08       Impact factor: 5.157

4.  Investigating intracellular dynamics of FtsZ cytoskeleton with photoactivation single-molecule tracking.

Authors:  Lili Niu; Ji Yu
Journal:  Biophys J       Date:  2008-04-04       Impact factor: 4.033

5.  Movement and equipositioning of plasmids by ParA filament disassembly.

Authors:  Simon Ringgaard; Jeroen van Zon; Martin Howard; Kenn Gerdes
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-11       Impact factor: 11.205

6.  Spatially ordered dynamics of the bacterial carbon fixation machinery.

Authors:  David F Savage; Bruno Afonso; Anna H Chen; Pamela A Silver
Journal:  Science       Date:  2010-03-05       Impact factor: 47.728

7.  A spindle-like apparatus guides bacterial chromosome segregation.

Authors:  Jerod L Ptacin; Steven F Lee; Ethan C Garner; Esteban Toro; Michael Eckart; Luis R Comolli; W E Moerner; Lucy Shapiro
Journal:  Nat Cell Biol       Date:  2010-07-25       Impact factor: 28.824

8.  F plasmid partition depends on interaction of SopA with non-specific DNA.

Authors:  Jean-Philippe Castaing; Jean-Yves Bouet; David Lane
Journal:  Mol Microbiol       Date:  2008-09-30       Impact factor: 3.501

Review 9.  Neuraminidase inhibitors as antiviral agents.

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10.  Oscillating focus of SopA associated with filamentous structure guides partitioning of F plasmid.

Authors:  Toshiyuki Hatano; Yoshiharu Yamaichi; Hironori Niki
Journal:  Mol Microbiol       Date:  2007-06       Impact factor: 3.501

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  68 in total

1.  Directed and persistent movement arises from mechanochemistry of the ParA/ParB system.

Authors:  Longhua Hu; Anthony G Vecchiarelli; Kiyoshi Mizuuchi; Keir C Neuman; Jian Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-08       Impact factor: 11.205

2.  Evidence for a DNA-relay mechanism in ParABS-mediated chromosome segregation.

Authors:  Hoong Chuin Lim; Ivan Vladimirovich Surovtsev; Bruno Gabriel Beltran; Fang Huang; Jörg Bewersdorf; Christine Jacobs-Wagner
Journal:  Elife       Date:  2014-05-23       Impact factor: 8.140

Review 3.  Recombination, Pairing, and Synapsis of Homologs during Meiosis.

Authors:  Denise Zickler; Nancy Kleckner
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-05-18       Impact factor: 10.005

4.  Can a Flux-Based Mechanism Explain Protein Cluster Positioning in a Three-Dimensional Cell Geometry?

Authors:  Matthias Kober; Silke Bergeler; Erwin Frey
Journal:  Biophys J       Date:  2019-07-04       Impact factor: 4.033

5.  Active Transport of Membrane Components by Self-Organization of the Min Proteins.

Authors:  Yu-Ling Shih; Ling-Ting Huang; Yu-Ming Tu; Bo-Fan Lee; Yu-Chiuan Bau; Chia Yee Hong; Hsiao-Lin Lee; Yan-Ping Shih; Min-Feng Hsu; Zheng-Xin Lu; Jui-Szu Chen; Ling Chao
Journal:  Biophys J       Date:  2019-03-23       Impact factor: 4.033

6.  DNA-relay mechanism is sufficient to explain ParA-dependent intracellular transport and patterning of single and multiple cargos.

Authors:  Ivan V Surovtsev; Manuel Campos; Christine Jacobs-Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-31       Impact factor: 11.205

7.  Physical modeling of chromosome segregation in escherichia coli reveals impact of force and DNA relaxation.

Authors:  Thomas J Lampo; Nathan J Kuwada; Paul A Wiggins; Andrew J Spakowitz
Journal:  Biophys J       Date:  2015-01-06       Impact factor: 4.033

8.  Plasmid segregation by a moving ATPase gradient.

Authors:  Daniela Kiekebusch; Martin Thanbichler
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-20       Impact factor: 11.205

9.  Molecular Anatomy of ParA-ParA and ParA-ParB Interactions during Plasmid Partitioning.

Authors:  Andrea Volante; Juan C Alonso
Journal:  J Biol Chem       Date:  2015-06-08       Impact factor: 5.157

Review 10.  Engineering spatiotemporal organization and dynamics in synthetic cells.

Authors:  Alessandro Groaz; Hossein Moghimianavval; Franco Tavella; Tobias W Giessen; Anthony G Vecchiarelli; Qiong Yang; Allen P Liu
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2020-11-21
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