Literature DB >> 24556785

Control of gene expression using a red- and far-red light-responsive bi-stable toggle switch.

Konrad Müller1, Matias D Zurbriggen1, Wilfried Weber2.   

Abstract

Light-triggered gene expression systems offer an unprecedented spatiotemporal resolution that cannot be achieved with classical chemically inducible genetic tools. Here we describe a protocol for red light-responsive gene expression in mammalian cells. This system can be toggled between stable ON and OFF states by short pulses of red and far-red light, respectively. In the protocol, CHO-K1 cells are transfected to allow red light-inducible expression of the secreted alkaline phosphatase (SEAP) reporter, and gene expression is tuned by illumination with light of increasing wavelengths. As a starting point for elaborate red light-responsive gene expression, we outline the reversible activation of gene expression and describe how a spatial pattern can be 'printed' on a monolayer of cells by using a photomask. The core protocol requires only 4 d from seeding of the cells to reporter quantification, and other than light-emitting diode (LED) illumination boxes no elaborate equipment is required.

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Year:  2014        PMID: 24556785     DOI: 10.1038/nprot.2014.038

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  27 in total

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Authors:  M Gossen; H Bujard
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

Review 2.  Molecular switches in animal cells.

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3.  Fast manipulation of cellular cAMP level by light in vivo.

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4.  Synthesis of phycocyanobilin in mammalian cells.

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Journal:  Chem Commun (Camb)       Date:  2013-10-11       Impact factor: 6.222

Review 5.  Developmental pattern formation: insights from physics and biology.

Authors:  Anna Kicheva; Michael Cohen; James Briscoe
Journal:  Science       Date:  2012-10-12       Impact factor: 47.728

Review 6.  Emerging properties of animal gene regulatory networks.

Authors:  Eric H Davidson
Journal:  Nature       Date:  2010-12-16       Impact factor: 49.962

7.  Rapid blue-light-mediated induction of protein interactions in living cells.

Authors:  Matthew J Kennedy; Robert M Hughes; Leslie A Peteya; Joel W Schwartz; Michael D Ehlers; Chandra L Tucker
Journal:  Nat Methods       Date:  2010-10-31       Impact factor: 28.547

8.  A genetically encoded photoactivatable Rac controls the motility of living cells.

Authors:  Yi I Wu; Daniel Frey; Oana I Lungu; Angelika Jaehrig; Ilme Schlichting; Brian Kuhlman; Klaus M Hahn
Journal:  Nature       Date:  2009-08-19       Impact factor: 49.962

9.  A red/far-red light-responsive bi-stable toggle switch to control gene expression in mammalian cells.

Authors:  Konrad Müller; Raphael Engesser; Stéphanie Metzger; Simon Schulz; Michael M Kämpf; Moritz Busacker; Thorsten Steinberg; Pascal Tomakidi; Martin Ehrbar; Ferenc Nagy; Jens Timmer; Matias D Zubriggen; Wilfried Weber
Journal:  Nucleic Acids Res       Date:  2013-01-25       Impact factor: 16.971

10.  Optical control of mammalian endogenous transcription and epigenetic states.

Authors:  Silvana Konermann; Mark D Brigham; Alexandro Trevino; Patrick D Hsu; Matthias Heidenreich; Le Cong; Randall J Platt; David A Scott; George M Church; Feng Zhang
Journal:  Nature       Date:  2013-08-23       Impact factor: 49.962

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  25 in total

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Journal:  Dev Dyn       Date:  2020-08-31       Impact factor: 3.780

Review 3.  Optogenetic approaches for dissecting neuromodulation and GPCR signaling in neural circuits.

Authors:  Skylar M Spangler; Michael R Bruchas
Journal:  Curr Opin Pharmacol       Date:  2016-11-19       Impact factor: 5.547

Review 4.  Optimizing optogenetic constructs for control over signaling and cell behaviours.

Authors:  P R O'Neill; N Gautam
Journal:  Photochem Photobiol Sci       Date:  2015-07-02       Impact factor: 3.982

5.  Near-infrared light-controlled systems for gene transcription regulation, protein targeting and spectral multiplexing.

Authors:  Taras A Redchuk; Andrii A Kaberniuk; Vladislav V Verkhusha
Journal:  Nat Protoc       Date:  2018-04-26       Impact factor: 13.491

Review 6.  Towards translational optogenetics.

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Journal:  Nat Biomed Eng       Date:  2022-01-13       Impact factor: 29.234

7.  Catch and Release: Photocleavable Cationic Diblock Copolymers as a Potential Platform for Nucleic Acid Delivery.

Authors:  Matthew D Green; Abbygail A Foster; Chad T Greco; Raghunath Roy; Rachel M Lehr; Thomas H Epps; Millicent O Sullivan
Journal:  Polym Chem       Date:  2014-06       Impact factor: 5.582

8.  Spatiotemporal Control of TGF-β Signaling with Light.

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Journal:  ACS Synth Biol       Date:  2018-01-12       Impact factor: 5.110

9.  Building a Simple and Versatile Illumination System for Optogenetic Experiments.

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Journal:  J Vis Exp       Date:  2021-01-12       Impact factor: 1.424

Review 10.  The role of clock genes in sleep, stress and memory.

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Journal:  Biochem Pharmacol       Date:  2021-02-27       Impact factor: 6.100

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