Literature DB >> 24549720

Regulatory non-coding RNAs: revolutionizing the RNA world.

Biao Huang1, Rongxin Zhang.   

Abstract

The majority of the genomic DNA sequence in mammalian and other higher organisms can be transcribed into abundant functional RNA transcripts, especially regulatory non-coding RNAs (ncRNAs) that are expressed in a developmentally and species-specific regulated manner. Here, we review various regulatory non-coding RNAs, including regulatory small non-coding RNAs (sncRNAs) and long non-coding RNAs (lncRNAs), and summarize two and eight kinds of distinct modes of action for sncRNAs and lncRNAs respectively, by which functional ncRNAs mediate the regulation of intracellular events.

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Year:  2014        PMID： 24549720     DOI： 10.1007/s11033-014-3259-6

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN： 0301-4851            Impact factor:   2.316


  63 in total

1.  MicroRNA genes are transcribed by RNA polymerase II.

Authors:  Yoontae Lee; Minju Kim; Jinju Han; Kyu-Hyun Yeom; Sanghyuk Lee; Sung Hee Baek; V Narry Kim
Journal:  EMBO J       Date:  2004-09-16       Impact factor: 11.598

Review 2.  MLL: a histone methyltransferase disrupted in leukemia.

Authors:  Jay L Hess
Journal:  Trends Mol Med       Date:  2004-10       Impact factor: 11.951

3.  A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression.

Authors:  Kevin C Wang; Yul W Yang; Bo Liu; Amartya Sanyal; Ryan Corces-Zimmerman; Yong Chen; Bryan R Lajoie; Angeline Protacio; Ryan A Flynn; Rajnish A Gupta; Joanna Wysocka; Ming Lei; Job Dekker; Jill A Helms; Howard Y Chang
Journal:  Nature       Date:  2011-03-20       Impact factor: 49.962

4.  A role for noncoding transcription in activation of the yeast PHO5 gene.

Authors:  Jay P Uhler; Christina Hertel; Jesper Q Svejstrup
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-30       Impact factor: 11.205

5.  A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1-induced epithelial-mesenchymal transition.

Authors:  Manuel Beltran; Isabel Puig; Cristina Peña; José Miguel García; Ana Belén Alvarez; Raúl Peña; Félix Bonilla; Antonio García de Herreros
Journal:  Genes Dev       Date:  2008-03-15       Impact factor: 11.361

6.  Mammalian microRNAs predominantly act to decrease target mRNA levels.

Authors:  Huili Guo; Nicholas T Ingolia; Jonathan S Weissman; David P Bartel
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

7.  Short RNAs repress translation after initiation in mammalian cells.

Authors:  Christian P Petersen; Marie-Eve Bordeleau; Jerry Pelletier; Phillip A Sharp
Journal:  Mol Cell       Date:  2006-02-17       Impact factor: 17.970

8.  Intersection of the RNA interference and X-inactivation pathways.

Authors:  Yuya Ogawa; Bryan K Sun; Jeannie T Lee
Journal:  Science       Date:  2008-06-06       Impact factor: 47.728

Review 9.  Small RNAs in transcriptional gene silencing and genome defence.

Authors:  Danesh Moazed
Journal:  Nature       Date:  2009-01-22       Impact factor: 49.962

Review 10.  The genetic signatures of noncoding RNAs.

Authors:  John S Mattick
Journal:  PLoS Genet       Date:  2009-04-24       Impact factor: 5.917
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  21 in total

Review 1.  MiR-34 and MiR-200: Regulator of Cell Fate Plasticity and Neural Development.

Authors:  Abhishek Jauhari; Sanjay Yadav
Journal:  Neuromolecular Med       Date:  2019-04-08       Impact factor: 3.843

2.  Microarray analysis of miRNA expression profiles following whole body irradiation in a mouse model.

Authors:  Molykutty J Aryankalayil; Sunita Chopra; Adeola Makinde; Iris Eke; Joel Levin; Uma Shankavaram; Laurel MacMillan; Claire Vanpouille-Box; Sandra Demaria; C Norman Coleman
Journal:  Biomarkers       Date:  2018-06-19       Impact factor: 2.658

3.  Long non-coding RNAs and hepatocellular carcinoma.

Authors:  Fu-Jun Yu; Jian-Jian Zheng; Pei-Hong Dong; Xiao-Ming Fan
Journal:  Mol Clin Oncol       Date:  2014-09-25

4.  Epigenetic changes in healthy human skeletal muscle following exercise- a systematic review.

Authors:  Macsue Jacques; Danielle Hiam; Jeffrey Craig; Romain Barrès; Nir Eynon; Sarah Voisin
Journal:  Epigenetics       Date:  2019-05-13       Impact factor: 4.528

5.  Long non-coding RNA LINC00504 regulates the Warburg effect in ovarian cancer through inhibition of miR-1244.

Authors:  Ya Liu; Xiaocui He; Yuli Chen; Dan Cao
Journal:  Mol Cell Biochem       Date:  2019-11-05       Impact factor: 3.396

Review 6.  Gene Insertion Into Genomic Safe Harbors for Human Gene Therapy.

Authors:  Eirini P Papapetrou; Axel Schambach
Journal:  Mol Ther       Date:  2016-02-12       Impact factor: 11.454

Review 7.  RNA-binding proteins and their role in kidney disease.

Authors:  Michael Ignarski; Roman-Ulrich Müller; Lisa Seufert; Thomas Benzing
Journal:  Nat Rev Nephrol       Date:  2021-11-03       Impact factor: 42.439

Review 8.  Long noncoding RNAs in hepatocellular carcinoma: Novel insights into their mechanism.

Authors:  Yong-Ru Liu; Rui-Xue Tang; Wen-Ting Huang; Fang-Hui Ren; Rong-Quan He; Li-Hua Yang; Dian-Zhong Luo; Yi-Wu Dang; Gang Chen
Journal:  World J Hepatol       Date:  2015-12-08

Review 9.  Role of microRNA-7 in liver diseases: a comprehensive review of the mechanisms and therapeutic applications.

Authors:  Sen Han; Ting Zhang; Praveen Kusumanchi; Nazmul Huda; Yanchao Jiang; Suthat Liangpunsakul; Zhihong Yang
Journal:  J Investig Med       Date:  2020-08-24       Impact factor: 3.235

10.  Lost and Found: Piwi and Argonaute Pathways in Flatworms.

Authors:  Santiago Fontenla; Gabriel Rinaldi; Jose F Tort
Journal:  Front Cell Infect Microbiol       Date:  2021-05-27       Impact factor: 5.293
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