Literature DB >> 24533263

Inhibitors of RNA editing as potential chemotherapeutics against trypanosomatid pathogens.

Reza Salavati1, Houtan Moshiri2, Smriti Kala3, Hamed Shateri Najafabadi4.   

Abstract

The related trypanosomatid pathogens, Trypanosoma brucei spp., Trypanosoma cruzi and Leishmania spp. cause devastating diseases in humans and animals and continue to pose a major challenge in drug development. Mitochondrial RNA editing, catalyzed by multi-protein complexes known as editosomes, has provided an opportunity for development of efficient and specific chemotherapeutic targets against trypanosomatid pathogens. This review will discuss both methods for discovery of RNA editing inhibitors, as well as inhibitors against the T. brucei editosome that were recently discovered through creative virtual and high throughput screening methods. In addition, the use of these inhibitors as agents that can block or perturb one or more steps of the RNA editing process will be discussed. These inhibitors can potentially be used to study the dynamic processing and assembly of the editosome proteins. A thorough understanding of the mechanisms and specificities of these new inhibitors is needed in order to contribute to both the functional studies of an essential gene expression mechanism and to the possibility of future drug development against the trypanosomatid pathogens.

Entities:  

Keywords:  High-throughput screening; RNA editing inhibitor; Trypanosomatids; Virtual screening

Year:  2011        PMID: 24533263      PMCID: PMC3862403          DOI: 10.1016/j.ijpddr.2011.10.003

Source DB:  PubMed          Journal:  Int J Parasitol Drugs Drug Resist        ISSN: 2211-3207            Impact factor:   4.077


  115 in total

Review 1.  Structure-based strategies for drug design and discovery.

Authors:  I D Kuntz
Journal:  Science       Date:  1992-08-21       Impact factor: 47.728

2.  Compositionally and functionally distinct editosomes in Trypanosoma brucei.

Authors:  Aswini K Panigrahi; Nancy Lewis Ernst; Gonzalo J Domingo; Michele Fleck; Reza Salavati; Kenneth D Stuart
Journal:  RNA       Date:  2006-04-12       Impact factor: 4.942

3.  An electrochemiluminescent aptamer switch for a high-throughput assay of an RNA editing reaction.

Authors:  Shuang Liang; Gregory J Connell
Journal:  RNA       Date:  2009-08-20       Impact factor: 4.942

4.  RNA editing in kinetoplastids.

Authors:  Stephen Hajduk; Torsten Ochsenreiter
Journal:  RNA Biol       Date:  2010-03-01       Impact factor: 4.652

5.  Trypanosoma brucei guide RNA poly(U) tail formation is stabilized by cognate mRNA.

Authors:  M T McManus; B K Adler; V W Pollard; S L Hajduk
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

6.  Reconstitution of full-round uridine-deletion RNA editing with three recombinant proteins.

Authors:  Xuedong Kang; Guanghan Gao; Kestrel Rogers; Arnold M Falick; Sharleen Zhou; Larry Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-08       Impact factor: 11.205

7.  Novel naphthalene-based inhibitors of Trypanosoma brucei RNA editing ligase 1.

Authors:  Jacob D Durrant; Laurence Hall; Robert V Swift; Melissa Landon; Achim Schnaufer; Rommie E Amaro
Journal:  PLoS Negl Trop Dis       Date:  2010-08-24

Review 8.  Natural and induced dyskinetoplastic trypanosomatids: how to live without mitochondrial DNA.

Authors:  Achim Schnaufer; Gonzalo J Domingo; Ken Stuart
Journal:  Int J Parasitol       Date:  2002-08       Impact factor: 3.981

9.  Splicing factor SF3b as a target of the antitumor natural product pladienolide.

Authors:  Yoshihiko Kotake; Koji Sagane; Takashi Owa; Yuko Mimori-Kiyosue; Hajime Shimizu; Mai Uesugi; Yasushi Ishihama; Masao Iwata; Yoshiharu Mizui
Journal:  Nat Chem Biol       Date:  2007-07-22       Impact factor: 15.040

10.  A tale of two TUTases.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva; Larry Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-03       Impact factor: 11.205

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  6 in total

1.  Computer-aided discovery of Trypanosoma brucei RNA-editing terminal uridylyl transferase 2 inhibitors.

Authors:  Ozlem Demir; Mehdi Labaied; Chris Merritt; Ken Stuart; Rommie E Amaro
Journal:  Chem Biol Drug Des       Date:  2014-06-05       Impact factor: 2.817

2.  Explorations of linked editosome domains leading to the discovery of motifs defining conserved pockets in editosome OB-folds.

Authors:  Young-Jun Park; Wim G J Hol
Journal:  J Struct Biol       Date:  2012-08-10       Impact factor: 2.867

Review 3.  Dual core processing: MRB1 is an emerging kinetoplast RNA editing complex.

Authors:  Hassan Hashimi; Sara L Zimmer; Michelle L Ammerman; Laurie K Read; Julius Lukeš
Journal:  Trends Parasitol       Date:  2013-01-08

4.  Charge reduction and thermodynamic stabilization of substrate RNAs inhibit RNA editing.

Authors:  W-Matthias Leeder; Andreas J Reuss; Michael Brecht; Katja Kratz; Josef Wachtveitl; H Ulrich Göringer
Journal:  PLoS One       Date:  2015-03-05       Impact factor: 3.240

5.  Sulfonated inhibitors of the RNA editing ligases validate the essential role of the MRP1/2 proteins in kinetoplastid RNA editing.

Authors:  Vaibhav Mehta; Houtan Moshiri; Akshaya Srikanth; Smriti Kala; Julius Lukeš; Reza Salavati
Journal:  RNA       Date:  2020-04-10       Impact factor: 4.942

6.  In Silico Identification of New Targets for Diagnosis, Vaccine, and Drug Candidates against Trypanosoma cruzi.

Authors:  Rafael Obata Trevisan; Malú Mateus Santos; Chamberttan Souza Desidério; Leandro Gomes Alves; Thiago de Jesus Sousa; Letícia de Castro Oliveira; Arun Kumar Jaiswal; Sandeep Tiwari; Weslley Guimarães Bovi; Mariana de Oliveira-Silva; Juliana Cristina Costa-Madeira; Lúcio Roberto Cançado Castellano; Marcos Vinicius Silva; Vasco Azevedo; Virmondes Rodrigues Junior; Carlo José Freire Oliveira; Siomar de Castro Soares
Journal:  Dis Markers       Date:  2020-12-10       Impact factor: 3.434

  6 in total

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