Literature DB >> 24531471

Small-angle scattering gives direct structural information about a membrane protein inside a lipid environment.

Søren A R Kynde1, Nicholas Skar-Gislinge1, Martin Cramer Pedersen1, Søren Roi Midtgaard1, Jens Baek Simonsen1, Ralf Schweins2, Kell Mortensen1, Lise Arleth1.   

Abstract

Monomeric bacteriorhodopsin (bR) reconstituted into POPC/POPG-containing nanodiscs was investigated by combined small-angle neutron and X-ray scattering. A novel hybrid approach to small-angle scattering data analysis was developed. In combination, these provided direct structural insight into membrane-protein localization in the nanodisc and into the protein-lipid interactions. It was found that bR is laterally decentred in the plane of the disc and is slightly tilted in the phospholipid bilayer. The thickness of the bilayer is reduced in response to the incorporation of bR. The observed tilt of bR is in good accordance with previously performed theoretical predictions and computer simulations based on the bR crystal structure. The result is a significant and essential step on the way to developing a general small-angle scattering-based method for determining the low-resolution structures of membrane proteins in physiologically relevant environments.

Entities:  

Keywords:  SANS; SAXS; Small-angle scattering; bacteriorhodopsin; membrane proteins; nanodisc

Mesh:

Substances:

Year:  2014        PMID: 24531471     DOI: 10.1107/S1399004713028344

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  15 in total

Review 1.  Emerging applications of small angle solution scattering in structural biology.

Authors:  Barnali N Chaudhuri
Journal:  Protein Sci       Date:  2015-02-12       Impact factor: 6.725

2.  Low-Resolution Structure of Detergent-Solubilized Membrane Proteins from Small-Angle Scattering Data.

Authors:  Alexandros Koutsioubas
Journal:  Biophys J       Date:  2017-12-05       Impact factor: 4.033

3.  Small-angle scattering determination of the shape and localization of human cytochrome P450 embedded in a phospholipid nanodisc environment.

Authors:  Nicholas Skar-Gislinge; Søren A R Kynde; Ilia G Denisov; Xin Ye; Ivan Lenov; Stephen G Sligar; Lise Arleth
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-11-26

Review 4.  Recent advances in nanodisc technology for membrane protein studies (2012-2017).

Authors:  John E Rouck; John E Krapf; Jahnabi Roy; Hannah C Huff; Aditi Das
Journal:  FEBS Lett       Date:  2017-07-06       Impact factor: 4.124

5.  Small-angle X-ray and neutron scattering demonstrates that cell-free expression produces properly formed disc-shaped nanolipoprotein particles.

Authors:  Thomas E Cleveland; Wei He; Angela C Evans; Nicholas O Fischer; Edmond Y Lau; Matthew A Coleman; Paul Butler
Journal:  Protein Sci       Date:  2018-02-13       Impact factor: 6.725

6.  Small-angle X-ray scattering of the cholesterol incorporation into human ApoA1-POPC discoidal particles.

Authors:  Søren Roi Midtgaard; Martin Cramer Pedersen; Lise Arleth
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

7.  SAXS/SANS on Supercharged Proteins Reveals Residue-Specific Modifications of the Hydration Shell.

Authors:  Henry S Kim; Anne Martel; Eric Girard; Martine Moulin; Michael Härtlein; Dominique Madern; Martin Blackledge; Bruno Franzetti; Frank Gabel
Journal:  Biophys J       Date:  2016-05-24       Impact factor: 4.033

8.  A Barley Efflux Transporter Operates in a Na+-Dependent Manner, as Revealed by a Multidisciplinary Platform.

Authors:  Yagnesh Nagarajan; Jay Rongala; Sukanya Luang; Abhishek Singh; Nadim Shadiac; Julie Hayes; Tim Sutton; Matthew Gilliham; Stephen D Tyerman; Gordon McPhee; Nicolas H Voelcker; Haydyn D T Mertens; Nigel M Kirby; Jung-Goo Lee; Yaroslava G Yingling; Maria Hrmova
Journal:  Plant Cell       Date:  2015-12-15       Impact factor: 11.277

9.  PET/CT Based In Vivo Evaluation of 64Cu Labelled Nanodiscs in Tumor Bearing Mice.

Authors:  Pie Huda; Tina Binderup; Martin Cramer Pedersen; Søren Roi Midtgaard; Dennis Ringkjøbing Elema; Andreas Kjær; Mikael Jensen; Lise Arleth
Journal:  PLoS One       Date:  2015-07-01       Impact factor: 3.240

10.  Order and disorder-An integrative structure of the full-length human growth hormone receptor.

Authors:  Noah Kassem; Raul Araya-Secchi; Katrine Bugge; Abigail Barclay; Helena Steinocher; Adree Khondker; Yong Wang; Aneta J Lenard; Jochen Bürck; Cagla Sahin; Anne S Ulrich; Michael Landreh; Martin Cramer Pedersen; Maikel C Rheinstädter; Per Amstrup Pedersen; Kresten Lindorff-Larsen; Lise Arleth; Birthe B Kragelund
Journal:  Sci Adv       Date:  2021-06-30       Impact factor: 14.136

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