Literature DB >> 24516166

H-Ras forms dimers on membrane surfaces via a protein-protein interface.

Wan-Chen Lin1, Lars Iversen, Hsiung-Lin Tu, Christopher Rhodes, Sune M Christensen, Jeffrey S Iwig, Scott D Hansen, William Y C Huang, Jay T Groves.   

Abstract

The lipid-anchored small GTPase Ras is an important signaling node in mammalian cells. A number of observations suggest that Ras is laterally organized within the cell membrane, and this may play a regulatory role in its activation. Lipid anchors composed of palmitoyl and farnesyl moieties in H-, N-, and K-Ras are widely suspected to be responsible for guiding protein organization in membranes. Here, we report that H-Ras forms a dimer on membrane surfaces through a protein-protein binding interface. A Y64A point mutation in the switch II region, known to prevent Son of sevenless and PI3K effector interactions, abolishes dimer formation. This suggests that the switch II region, near the nucleotide binding cleft, is either part of, or allosterically coupled to, the dimer interface. By tethering H-Ras to bilayers via a membrane-miscible lipid tail, we show that dimer formation is mediated by protein interactions and does not require lipid anchor clustering. We quantitatively characterize H-Ras dimerization in supported membranes using a combination of fluorescence correlation spectroscopy, photon counting histogram analysis, time-resolved fluorescence anisotropy, single-molecule tracking, and step photobleaching analysis. The 2D dimerization Kd is measured to be ∼1 × 10(3) molecules/µm(2), and no higher-order oligomers were observed. Dimerization only occurs on the membrane surface; H-Ras is strictly monomeric at comparable densities in solution. Analysis of a number of H-Ras constructs, including key changes to the lipidation pattern of the hypervariable region, suggest that dimerization is a general property of native H-Ras on membrane surfaces.

Entities:  

Keywords:  Ras assay; Ras signaling

Mesh:

Substances:

Year:  2014        PMID: 24516166      PMCID: PMC3939930          DOI: 10.1073/pnas.1321155111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  59 in total

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Authors:  M A Hink; R A Griep; J W Borst; A van Hoek; M H Eppink; A Schots; A J Visser
Journal:  J Biol Chem       Date:  2000-06-09       Impact factor: 5.157

2.  Formation of the Ras dimer is essential for Raf-1 activation.

Authors:  K Inouye; S Mizutani; H Koide; Y Kaziro
Journal:  J Biol Chem       Date:  2000-02-11       Impact factor: 5.157

3.  NMR characterization of full-length farnesylated and non-farnesylated H-Ras and its implications for Raf activation.

Authors:  Roopa Thapar; Jason G Williams; Sharon L Campbell
Journal:  J Mol Biol       Date:  2004-11-05       Impact factor: 5.469

4.  H-ras, K-ras, and inner plasma membrane raft proteins operate in nanoclusters with differential dependence on the actin cytoskeleton.

Authors:  Sarah J Plowman; Cornelia Muncke; Robert G Parton; John F Hancock
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-13       Impact factor: 11.205

5.  Negative regulation of Rho family GTPases Cdc42 and Rac2 by homodimer formation.

Authors:  B Zhang; Y Zheng
Journal:  J Biol Chem       Date:  1998-10-02       Impact factor: 5.157

6.  N-Ras forms dimers at POPC membranes.

Authors:  Jörn Güldenhaupt; Till Rudack; Peter Bachler; Daniel Mann; Gemma Triola; Herbert Waldmann; Carsten Kötting; Klaus Gerwert
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

7.  Structure and dynamics of the full-length lipid-modified H-Ras protein in a 1,2-dimyristoylglycero-3-phosphocholine bilayer.

Authors:  Alemayehu A Gorfe; Michael Hanzal-Bayer; Daniel Abankwa; John F Hancock; J Andrew McCammon
Journal:  J Med Chem       Date:  2007-01-31       Impact factor: 7.446

8.  The Rsr1/Bud1 GTPase interacts with itself and the Cdc42 GTPase during bud-site selection and polarity establishment in budding yeast.

Authors:  Pil Jung Kang; Laure Béven; Seethalakshmi Hariharan; Hay-Oak Park
Journal:  Mol Biol Cell       Date:  2010-06-29       Impact factor: 4.138

9.  Monitoring lipid anchor organization in cell membranes by PIE-FCCS.

Authors:  Sara B Triffo; Hector H Huang; Adam W Smith; Eldon T Chou; Jay T Groves
Journal:  J Am Chem Soc       Date:  2012-06-14       Impact factor: 15.419

10.  Membrane-dependent signal integration by the Ras activator Son of sevenless.

Authors:  Jodi Gureasko; William J Galush; Sean Boykevisch; Holger Sondermann; Dafna Bar-Sagi; Jay T Groves; John Kuriyan
Journal:  Nat Struct Mol Biol       Date:  2008-05-04       Impact factor: 15.369

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  79 in total

1.  The Ras G Domain Lacks the Intrinsic Propensity to Form Dimers.

Authors:  Elizaveta A Kovrigina; Azamat R Galiakhmetov; Evgenii L Kovrigin
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

2.  Seeing is believing: Ras dimers observed in live cells.

Authors:  Mark R Philips; Channing J Der
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-30       Impact factor: 11.205

3.  E-cadherin junction formation involves an active kinetic nucleation process.

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-19       Impact factor: 11.205

Review 4.  MicroRNA-Based Therapeutic Strategies for Targeting Mutant and Wild Type RAS in Cancer.

Authors:  Sriganesh B Sharma; John Michael Ruppert
Journal:  Drug Dev Res       Date:  2015-08-18       Impact factor: 4.360

Review 5.  Drugging Ras GTPase: a comprehensive mechanistic and signaling structural view.

Authors:  Shaoyong Lu; Hyunbum Jang; Shuo Gu; Jian Zhang; Ruth Nussinov
Journal:  Chem Soc Rev       Date:  2016-07-11       Impact factor: 54.564

Review 6.  RAS-targeted therapies: is the undruggable drugged?

Authors:  Amanda R Moore; Scott C Rosenberg; Frank McCormick; Shiva Malek
Journal:  Nat Rev Drug Discov       Date:  2020-06-11       Impact factor: 84.694

Review 7.  Regulation of RAF protein kinases in ERK signalling.

Authors:  Hugo Lavoie; Marc Therrien
Journal:  Nat Rev Mol Cell Biol       Date:  2015-05       Impact factor: 94.444

8.  Molecular mechanism of activation of class IA phosphoinositide 3-kinases (PI3Ks) by membrane-localized HRas.

Authors:  Braden D Siempelkamp; Manoj K Rathinaswamy; Meredith L Jenkins; John E Burke
Journal:  J Biol Chem       Date:  2017-05-17       Impact factor: 5.157

9.  TCL/RhoJ Plasma Membrane Localization and Nucleotide Exchange Is Coordinately Regulated by Amino Acids within the N Terminus and a Distal Loop Region.

Authors:  Karly L Ackermann; Rebecca R Florke; Shannon S Reyes; Brooke R Tader; Michael J Hamann
Journal:  J Biol Chem       Date:  2016-09-22       Impact factor: 5.157

10.  Oncogenic K-Ras Binds to an Anionic Membrane in Two Distinct Orientations: A Molecular Dynamics Analysis.

Authors:  Priyanka Prakash; Yong Zhou; Hong Liang; John F Hancock; Alemayehu A Gorfe
Journal:  Biophys J       Date:  2016-03-08       Impact factor: 4.033

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