Literature DB >> 24481703

A study in transfer learning: leveraging data from multiple hospitals to enhance hospital-specific predictions.

Jenna Wiens1, John Guttag1, Eric Horvitz2.   

Abstract

BACKGROUND: Data-driven risk stratification models built using data from a single hospital often have a paucity of training data. However, leveraging data from other hospitals can be challenging owing to institutional differences with patients and with data coding and capture.
OBJECTIVE: To investigate three approaches to learning hospital-specific predictions about the risk of hospital-associated infection with Clostridium difficile, and perform a comparative analysis of the value of different ways of using external data to enhance hospital-specific predictions.
MATERIALS AND METHODS: We evaluated each approach on 132 853 admissions from three hospitals, varying in size and location. The first approach was a single-task approach, in which only training data from the target hospital (ie, the hospital for which the model was intended) were used. The second used only data from the other two hospitals. The third approach jointly incorporated data from all hospitals while seeking a solution in the target space.
RESULTS: The relative performance of the three different approaches was found to be sensitive to the hospital selected as the target. However, incorporating data from all hospitals consistently had the highest performance. DISCUSSION: The results characterize the challenges and opportunities that come with (1) using data or models from collections of hospitals without adapting them to the site at which the model will be used, and (2) using only local data to build models for small institutions or rare events.
CONCLUSIONS: We show how external data from other hospitals can be successfully and efficiently incorporated into hospital-specific models. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.

Entities:  

Keywords:  c. difficile; electronic health records; predictive models; risk stratification; transfer learning

Mesh:

Year:  2014        PMID: 24481703      PMCID: PMC4078276          DOI: 10.1136/amiajnl-2013-002162

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  3 in total

1.  Integrating syndromic surveillance data across multiple locations: effects on outbreak detection performance.

Authors:  Ben Y Reis; Kenneth D Mandl
Journal:  AMIA Annu Symp Proc       Date:  2003

2.  Predictors of prolonged hospital stay for the treatment of severe neuropsychiatric symptoms in patients with dementia: a cohort study in multiple hospitals.

Authors:  Hiromichi Sugiyama; Hiroaki Kazui; Kazue Shigenobu; Yoshihiro Masaki; Naoki Hatta; Daisuke Yamamoto; Tamiki Wada; Keiko Nomura; Kenji Yoshiyama; Kaoru Tabushi; Masatoshi Takeda
Journal:  Int Psychogeriatr       Date:  2013-04-23       Impact factor: 3.878

3.  The National Surgical Quality Improvement Program in non-veterans administration hospitals: initial demonstration of feasibility.

Authors:  Aaron S Fink; Darrell A Campbell; Robert M Mentzer; William G Henderson; Jennifer Daley; Janet Bannister; Kwan Hur; Shukri F Khuri
Journal:  Ann Surg       Date:  2002-09       Impact factor: 12.969

  3 in total
  25 in total

1.  Recurrent Neural Networks for Early Detection of Heart Failure From Longitudinal Electronic Health Record Data: Implications for Temporal Modeling With Respect to Time Before Diagnosis, Data Density, Data Quantity, and Data Type.

Authors:  Robert Chen; Walter F Stewart; Jimeng Sun; Kenney Ng; Xiaowei Yan
Journal:  Circ Cardiovasc Qual Outcomes       Date:  2019-10-15

2.  Motivating the additional use of external validity: examining transportability in a model of glioblastoma multiforme.

Authors:  Kyle W Singleton; William Speier; Alex A T Bui; William Hsu
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

3.  Pediatric readmission classification using stacked regularized logistic regression models.

Authors:  Gregor Stiglic; Fei Wang; Adam Davey; Zoran Obradovic
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

4.  Transfer and transport: incorporating causal methods for improving predictive models.

Authors:  Kyle W Singleton; Alex A T Bui; William Hsu
Journal:  J Am Med Inform Assoc       Date:  2014-07-09       Impact factor: 4.497

Review 5.  Opportunities and challenges in developing risk prediction models with electronic health records data: a systematic review.

Authors:  Benjamin A Goldstein; Ann Marie Navar; Michael J Pencina; John P A Ioannidis
Journal:  J Am Med Inform Assoc       Date:  2016-05-17       Impact factor: 4.497

Review 6.  Machine Learning for Healthcare: On the Verge of a Major Shift in Healthcare Epidemiology.

Authors:  Jenna Wiens; Erica S Shenoy
Journal:  Clin Infect Dis       Date:  2018-01-06       Impact factor: 9.079

7.  Cross-registry neural domain adaptation to extract mutational test results from pathology reports.

Authors:  Anthony Rios; Eric B Durbin; Isaac Hands; Susanne M Arnold; Darshil Shah; Stephen M Schwartz; Bernardo H L Goulart; Ramakanth Kavuluru
Journal:  J Biomed Inform       Date:  2019-08-08       Impact factor: 6.317

8.  Improving patient prostate cancer risk assessment: Moving from static, globally-applied to dynamic, practice-specific risk calculators.

Authors:  Andreas N Strobl; Andrew J Vickers; Ben Van Calster; Ewout Steyerberg; Robin J Leach; Ian M Thompson; Donna P Ankerst
Journal:  J Biomed Inform       Date:  2015-05-16       Impact factor: 6.317

9.  Predicting Adverse Drug Reactions on Distributed Health Data using Federated Learning.

Authors:  Olivia Choudhury; Yoonyoung Park; Theodoros Salonidis; Aris Gkoulalas-Divanis; Issa Sylla; Amar K Das
Journal:  AMIA Annu Symp Proc       Date:  2020-03-04

10.  Development and evaluation of inexpensive automated deep learning-based imaging systems for embryology.

Authors:  Manoj Kumar Kanakasabapathy; Prudhvi Thirumalaraju; Charles L Bormann; Hemanth Kandula; Irene Dimitriadis; Irene Souter; Vinish Yogesh; Sandeep Kota Sai Pavan; Divyank Yarravarapu; Raghav Gupta; Rohan Pooniwala; Hadi Shafiee
Journal:  Lab Chip       Date:  2019-11-22       Impact factor: 6.799

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.