Literature DB >> 24481072

PIFs: systems integrators in plant development.

Pablo Leivar1, Elena Monte.   

Abstract

Phytochrome-interacting factors (PIFs) are members of the Arabidopsis thaliana basic helix-loop-helix family of transcriptional regulators that interact specifically with the active Pfr conformer of phytochrome (phy) photoreceptors. PIFs are central regulators of photomorphogenic development that act to promote stem growth, and this activity is reversed upon interaction with phy in response to light. Recently, significant progress has been made in defining the transcriptional networks directly regulated by PIFs, as well as the convergence of other signaling pathways on the PIFs to modulate growth. Here, we summarize and highlight these findings in the context of PIFs acting as integrators of light and other signals. We discuss progress in our understanding of the transcriptional and posttranslational regulation of PIFs that illustrates the integration of light with hormonal pathways and the circadian clock, and we review seedling hypocotyl growth as a paradigm of PIFs acting at the interface of these signals. Based on these advances, PIFs are emerging as required factors for growth, acting as central components of a regulatory node that integrates multiple internal and external signals to optimize plant development.

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Year:  2014        PMID: 24481072      PMCID: PMC3963594          DOI: 10.1105/tpc.113.120857

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  167 in total

1.  Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction.

Authors:  Jonghyun Kim; Hankuil Yi; Goh Choi; Byongchul Shin; Pill-Soon Song; Giltsu Choi
Journal:  Plant Cell       Date:  2003-09-24       Impact factor: 11.277

2.  Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation.

Authors:  Bassem Al-Sady; Weimin Ni; Stefan Kircher; Eberhard Schäfer; Peter H Quail
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

3.  Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae.

Authors:  Lorenzo Carretero-Paulet; Anahit Galstyan; Irma Roig-Villanova; Jaime F Martínez-García; Jose R Bilbao-Castro; David L Robertson
Journal:  Plant Physiol       Date:  2010-05-14       Impact factor: 8.340

4.  PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis.

Authors:  Jennifer Moon; Ling Zhu; Hui Shen; Enamul Huq
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-30       Impact factor: 11.205

5.  PHYTOCHROME INTERACTING FACTOR3 associates with the histone deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings.

Authors:  Xuncheng Liu; Chia-Yang Chen; Ko-Ching Wang; Ming Luo; Ready Tai; Lianyu Yuan; Minglei Zhao; Songguang Yang; Gang Tian; Yuhai Cui; Hsu-Liang Hsieh; Keqiang Wu
Journal:  Plant Cell       Date:  2013-04-02       Impact factor: 11.277

6.  Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis.

Authors:  Gabriela C Pagnussat; Hee-Ju Yu; Quy A Ngo; Sarojam Rajani; Sevugan Mayalagu; Cameron S Johnson; Arnaud Capron; Li-Fen Xie; De Ye; Venkatesan Sundaresan
Journal:  Development       Date:  2005-01-05       Impact factor: 6.868

Review 7.  Photoreceptor signaling networks in plant responses to shade.

Authors:  Jorge J Casal
Journal:  Annu Rev Plant Biol       Date:  2013-01-25       Impact factor: 26.379

8.  Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis.

Authors:  Diana Bauer; András Viczián; Stefan Kircher; Tabea Nobis; Roland Nitschke; Tim Kunkel; Kishore C S Panigrahi; Eva Adám; Erzsébet Fejes; Eberhard Schäfer; Ferenc Nagy
Journal:  Plant Cell       Date:  2004-05-21       Impact factor: 11.277

9.  Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness.

Authors:  Pablo Leivar; Elena Monte; Yoshito Oka; Tiffany Liu; Christine Carle; Alicia Castillon; Enamul Huq; Peter H Quail
Journal:  Curr Biol       Date:  2008-12-09       Impact factor: 10.834

10.  Antagonistic basic helix-loop-helix/bZIP transcription factors form transcriptional modules that integrate light and reactive oxygen species signaling in Arabidopsis.

Authors:  Dongqin Chen; Gang Xu; Weijiang Tang; Yanjun Jing; Qiang Ji; Zhangjun Fei; Rongcheng Lin
Journal:  Plant Cell       Date:  2013-05-03       Impact factor: 11.277

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  186 in total

1.  Night-Break Experiments Shed Light on the Photoperiod1-Mediated Flowering.

Authors:  Stephen Pearce; Lindsay M Shaw; Huiqiong Lin; Jennifer D Cotter; Chengxia Li; Jorge Dubcovsky
Journal:  Plant Physiol       Date:  2017-04-13       Impact factor: 8.340

Review 2.  Expanding Roles of PIFs in Signal Integration from Multiple Processes.

Authors:  Inyup Paik; Praveen Kumar Kathare; Jeong-Il Kim; Enamul Huq
Journal:  Mol Plant       Date:  2017-07-13       Impact factor: 13.164

3.  Central clock components modulate plant shade avoidance by directly repressing transcriptional activation activity of PIF proteins.

Authors:  Yu Zhang; Anne Pfeiffer; James M Tepperman; Jutta Dalton-Roesler; Pablo Leivar; Eduardo Gonzalez Grandio; Peter H Quail
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-27       Impact factor: 11.205

4.  PHYTOCHROME INTERACTING FACTOR1 Enhances the E3 Ligase Activity of CONSTITUTIVE PHOTOMORPHOGENIC1 to Synergistically Repress Photomorphogenesis in Arabidopsis.

Authors:  Xiaosa Xu; Inyup Paik; Ling Zhu; Qingyun Bu; Xi Huang; Xing Wang Deng; Enamul Huq
Journal:  Plant Cell       Date:  2014-05-23       Impact factor: 11.277

5.  Mechanisms of Cryptochrome-Mediated Photoresponses in Plants.

Authors:  Qin Wang; Chentao Lin
Journal:  Annu Rev Plant Biol       Date:  2020-03-13       Impact factor: 26.379

6.  PIF3 is a negative regulator of the CBF pathway and freezing tolerance in Arabidopsis.

Authors:  Bochen Jiang; Yiting Shi; Xiaoyan Zhang; Xiaoyun Xin; Lijuan Qi; Hongwei Guo; Jigang Li; Shuhua Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-24       Impact factor: 11.205

7.  PCH1 and PCHL Directly Interact with PIF1, Promote Its Degradation, and Inhibit Its Transcriptional Function during Photomorphogenesis.

Authors:  Mei-Chun Cheng; Beatrix Enderle; Praveen Kumar Kathare; Rafya Islam; Andreas Hiltbrunner; Enamul Huq
Journal:  Mol Plant       Date:  2020-02-13       Impact factor: 13.164

Review 8.  Light Perception: A Matter of Time.

Authors:  Sabrina E Sanchez; Matias L Rugnone; Steve A Kay
Journal:  Mol Plant       Date:  2020-02-14       Impact factor: 13.164

9.  Dynamic regulation of PIF5 by COP1-SPA complex to optimize photomorphogenesis in Arabidopsis.

Authors:  Vinh Ngoc Pham; Praveen Kumar Kathare; Enamul Huq
Journal:  Plant J       Date:  2018-10       Impact factor: 6.417

10.  SUMOylation of phytochrome-B negatively regulates light-induced signaling in Arabidopsis thaliana.

Authors:  Ari Sadanandom; Éva Ádám; Beatriz Orosa; András Viczián; Cornelia Klose; Cunjin Zhang; Eve-Marie Josse; László Kozma-Bognár; Ferenc Nagy
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

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