Literature DB >> 30144338

Dynamic regulation of PIF5 by COP1-SPA complex to optimize photomorphogenesis in Arabidopsis.

Vinh Ngoc Pham1, Praveen Kumar Kathare1, Enamul Huq1.   

Abstract

Light signal provides the spatial and temporal information for plants to adapt to the prevailing environmental conditions. Alterations in light quality and quantity can trigger robust changes in global gene expression. In Arabidopsis thaliana, two groups of key factors regulating those changes in gene expression are CONSTITUTIVE PHOTOMORPHOGENESIS/DEETIOLATED/FUSCA (COP/DET/FUS) and a subset of basic helix-loop-helix transcription factors called PHYTOCHROME-INTERACTING FACTORS (PIFs). Recently, rapid progress has been made in characterizing the E3 ubiquitin ligases for the light-induced degradation of PIF1, PIF3 and PIF4; however, the E3 ligase(s) for PIF5 remains unknown. Here, we show that the CUL4COP 1- SPA complex is necessary for the red light-induced degradation of PIF5. Furthermore, COP1 and SPA proteins stabilize PIF5 in the dark, but promote the ubiquitination and degradation of PIF5 in response to red light through the 26S proteasome pathway. Genetic analysis illustrates that overexpression of PIF5 can partially suppress both cop1-4 and spaQ seedling de-etiolation phenotypes under dark and red-light conditions. In addition, the PIF5 protein level cycles under both diurnal and constant light conditions, which is also defective in the cop1-4 and spaQ backgrounds. Both cop1-4 and spaQ show defects in diurnal growth pattern. Overexpression of PIF5 partially restores growth defects in cop1-4 and spaQ under diurnal conditions, suggesting that the COP1-SPA complex plays an essential role in photoperiodic hypocotyl growth, partly through regulating the PIF5 level. Taken together, our data illustrate how the CUL4COP 1- SPA E3 ligase dynamically controls the PIF5 level to regulate plant development.
© 2018 The Authors The Plant Journal © 2018 John Wiley & Sons Ltd.

Entities:  

Keywords:  E3 ubiquitin ligase; bHLH transcription factor; photomorphogenesis; photoperiodic hypocotyl growth; proteasome degradation

Mesh:

Substances:

Year:  2018        PMID: 30144338      PMCID: PMC6177295          DOI: 10.1111/tpj.14074

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  70 in total

1.  COP1, an Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a G beta homologous domain.

Authors:  X W Deng; M Matsui; N Wei; D Wagner; A M Chu; K A Feldmann; P H Quail
Journal:  Cell       Date:  1992-11-27       Impact factor: 41.582

2.  Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction.

Authors:  Jonghyun Kim; Hankuil Yi; Goh Choi; Byongchul Shin; Pill-Soon Song; Giltsu Choi
Journal:  Plant Cell       Date:  2003-09-24       Impact factor: 11.277

3.  Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation.

Authors:  Bassem Al-Sady; Weimin Ni; Stefan Kircher; Eberhard Schäfer; Peter H Quail
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

Review 4.  Expanding Roles of PIFs in Signal Integration from Multiple Processes.

Authors:  Inyup Paik; Praveen Kumar Kathare; Jeong-Il Kim; Enamul Huq
Journal:  Mol Plant       Date:  2017-07-13       Impact factor: 13.164

Review 5.  Sensing the light environment in plants: photoreceptors and early signaling steps.

Authors:  Vinicius Costa Galvão; Christian Fankhauser
Journal:  Curr Opin Neurobiol       Date:  2015-01-29       Impact factor: 6.627

6.  PHYTOCHROME INTERACTING FACTOR3 associates with the histone deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings.

Authors:  Xuncheng Liu; Chia-Yang Chen; Ko-Ching Wang; Ming Luo; Ready Tai; Lianyu Yuan; Minglei Zhao; Songguang Yang; Gang Tian; Yuhai Cui; Hsu-Liang Hsieh; Keqiang Wu
Journal:  Plant Cell       Date:  2013-04-02       Impact factor: 11.277

7.  Arabidopsis PHYTOCHROME INTERACTING FACTOR proteins promote phytochrome B polyubiquitination by COP1 E3 ligase in the nucleus.

Authors:  In-Cheol Jang; Rossana Henriques; Hak Soo Seo; Akira Nagatani; Nam-Hai Chua
Journal:  Plant Cell       Date:  2010-07-06       Impact factor: 11.277

8.  Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis.

Authors:  Diana Bauer; András Viczián; Stefan Kircher; Tabea Nobis; Roland Nitschke; Tim Kunkel; Kishore C S Panigrahi; Eva Adám; Erzsébet Fejes; Eberhard Schäfer; Ferenc Nagy
Journal:  Plant Cell       Date:  2004-05-21       Impact factor: 11.277

9.  Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness.

Authors:  Pablo Leivar; Elena Monte; Yoshito Oka; Tiffany Liu; Christine Carle; Alicia Castillon; Enamul Huq; Peter H Quail
Journal:  Curr Biol       Date:  2008-12-09       Impact factor: 10.834

10.  Phytochrome diversity in green plants and the origin of canonical plant phytochromes.

Authors:  Fay-Wei Li; Michael Melkonian; Carl J Rothfels; Juan Carlos Villarreal; Dennis W Stevenson; Sean W Graham; Gane Ka-Shu Wong; Kathleen M Pryer; Sarah Mathews
Journal:  Nat Commun       Date:  2015-07-28       Impact factor: 14.919

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  15 in total

1.  Unique and contrasting effects of light and temperature cues on plant transcriptional programs.

Authors:  Mai Jarad; Rea Antoniou-Kourounioti; Jo Hepworth; Julia I Qüesta
Journal:  Transcription       Date:  2020-10-04

2.  PHYTOCHROME INTERACTING FACTOR8 Inhibits Phytochrome A-Mediated Far-Red Light Responses in Arabidopsis.

Authors:  Jeonghwa Oh; Eunae Park; Kijong Song; Gabyong Bae; Giltsu Choi
Journal:  Plant Cell       Date:  2019-11-15       Impact factor: 11.277

3.  MYB30 Is a Key Negative Regulator of Arabidopsis Photomorphogenic Development That Promotes PIF4 and PIF5 Protein Accumulation in the Light.

Authors:  Yan Yan; Cong Li; Xiaojing Dong; Hong Li; Dun Zhang; Yangyang Zhou; Bochen Jiang; Jing Peng; Xinyan Qin; Jinkui Cheng; Xiaoji Wang; Pengyu Song; Lijuan Qi; Yuan Zheng; Bosheng Li; William Terzaghi; Shuhua Yang; Yan Guo; Jigang Li
Journal:  Plant Cell       Date:  2020-05-05       Impact factor: 11.277

4.  PCH1 and PCHL Directly Interact with PIF1, Promote Its Degradation, and Inhibit Its Transcriptional Function during Photomorphogenesis.

Authors:  Mei-Chun Cheng; Beatrix Enderle; Praveen Kumar Kathare; Rafya Islam; Andreas Hiltbrunner; Enamul Huq
Journal:  Mol Plant       Date:  2020-02-13       Impact factor: 13.164

5.  UVR8 disrupts stabilisation of PIF5 by COP1 to inhibit plant stem elongation in sunlight.

Authors:  Ashutosh Sharma; Bhavana Sharma; Scott Hayes; Konstantin Kerner; Ute Hoecker; Gareth I Jenkins; Keara A Franklin
Journal:  Nat Commun       Date:  2019-09-27       Impact factor: 14.919

Review 6.  Molecular mechanisms underlying phytochrome-controlled morphogenesis in plants.

Authors:  Martina Legris; Yetkin Çaka Ince; Christian Fankhauser
Journal:  Nat Commun       Date:  2019-11-19       Impact factor: 14.919

7.  Degradation of the transcription factors PIF4 and PIF5 under UV-B promotes UVR8-mediated inhibition of hypocotyl growth in Arabidopsis.

Authors:  Eleni Tavridou; Marie Pireyre; Roman Ulm
Journal:  Plant J       Date:  2019-11-07       Impact factor: 6.417

8.  Molecular bases for the constitutive photomorphogenic phenotypes in Arabidopsis.

Authors:  Vinh Ngoc Pham; Xiaosa Xu; Enamul Huq
Journal:  Development       Date:  2018-12-03       Impact factor: 6.862

9.  UVR8-mediated inhibition of shade avoidance involves HFR1 stabilization in Arabidopsis.

Authors:  Eleni Tavridou; Emanuel Schmid-Siegert; Christian Fankhauser; Roman Ulm
Journal:  PLoS Genet       Date:  2020-05-11       Impact factor: 5.917

10.  A phyB-PIF1-SPA1 kinase regulatory complex promotes photomorphogenesis in Arabidopsis.

Authors:  Inyup Paik; Fulu Chen; Vinh Ngoc Pham; Ling Zhu; Jeong-Il Kim; Enamul Huq
Journal:  Nat Commun       Date:  2019-09-16       Impact factor: 14.919

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