Literature DB >> 14508006

Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction.

Jonghyun Kim1, Hankuil Yi, Goh Choi, Byongchul Shin, Pill-Soon Song, Giltsu Choi.   

Abstract

Phytochromes regulate various light responses through their interactions with different signaling proteins, such as phytochrome interacting factor 3 (PIF3). However, the physiological functions of PIF3 in light signaling are not yet fully understood. To increase our understanding of these roles, we characterized a T-DNA insertional pif3 mutant and transgenic plants overexpressing the full-length PIF3. Transgenic overexpressing lines displayed longer hypocotyls and smaller cotyledons under red light and reduced cotyledon opening under both red and far-red light, whereas the pif3 mutant showed the opposite phenotypes. The accumulation of anthocyanin and chlorophyll further indicated complicated features of PIF3 function. The accumulation of anthocyanin was increased and the content of chlorophyll was decreased in the overexpression lines. Our data indicate that PIF3 plays complex roles depending on the type of light response and the light conditions.

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Year:  2003        PMID: 14508006      PMCID: PMC197304          DOI: 10.1105/tpc.014498

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  47 in total

Review 1.  Phytochrome-interacting factors.

Authors:  P H Quail
Journal:  Semin Cell Dev Biol       Date:  2000-12       Impact factor: 7.727

Review 2.  The genetics of phytochrome signalling in Arabidopsis.

Authors:  M E Hudson
Journal:  Semin Cell Dev Biol       Date:  2000-12       Impact factor: 7.727

3.  Multiple transcription-factor genes are early targets of phytochrome A signaling.

Authors:  J M Tepperman; T Zhu; H S Chang; X Wang; P H Quail
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

4.  The VLF loci, polymorphic between ecotypes Landsberg erecta and Columbia, dissect two branches of phytochrome A signal transduction that correspond to very-low-fluence and high-irradiance responses.

Authors:  M J Yanovsky; J J Casal; J P Luppi
Journal:  Plant J       Date:  1997-09       Impact factor: 6.417

5.  Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition.

Authors:  T Shimizu; A Toumoto; K Ihara; M Shimizu; Y Kyogoku; N Ogawa; Y Oshima; T Hakoshima
Journal:  EMBO J       Date:  1997-08-01       Impact factor: 11.598

6.  Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain.

Authors:  A R Ferré-D'Amaré; G C Prendergast; E B Ziff; S K Burley
Journal:  Nature       Date:  1993-05-06       Impact factor: 49.962

7.  The phytochrome apoprotein family in Arabidopsis is encoded by five genes: the sequences and expression of PHYD and PHYE.

Authors:  T Clack; S Mathews; R A Sharrock
Journal:  Plant Mol Biol       Date:  1994-06       Impact factor: 4.076

8.  The Arabidopsis sugar-insensitive mutants sis4 and sis5 are defective in abscisic acid synthesis and response.

Authors:  R J Laby; M S Kincaid; D Kim; S I Gibson
Journal:  Plant J       Date:  2000-09       Impact factor: 6.417

9.  LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis.

Authors:  Tsuyoshi Mizoguchi; Kay Wheatley; Yoshie Hanzawa; Louisa Wright; Mutsuko Mizoguchi; Hae Ryong Song; Isabelle A Carré; George Coupland
Journal:  Dev Cell       Date:  2002-05       Impact factor: 12.270

10.  Phytochrome B binds with greater apparent affinity than phytochrome A to the basic helix-loop-helix factor PIF3 in a reaction requiring the PAS domain of PIF3.

Authors:  Y Zhu; J M Tepperman; C D Fairchild; P H Quail
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

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  121 in total

1.  Phytochrome phosphorylation modulates light signaling by influencing the protein-protein interaction.

Authors:  Jeong-Il Kim; Yu Shen; Yun-Jeong Han; Joung-Eun Park; Daniel Kirchenbauer; Moon-Soo Soh; Ferenc Nagy; Eberhard Schäfer; Pill-Soon Song
Journal:  Plant Cell       Date:  2004-09-17       Impact factor: 11.277

2.  Functional profiling identifies genes involved in organ-specific branches of the PIF3 regulatory network in Arabidopsis.

Authors:  Maria Sentandreu; Guiomar Martín; Nahuel González-Schain; Pablo Leivar; Judit Soy; James M Tepperman; Peter H Quail; Elena Monte
Journal:  Plant Cell       Date:  2011-11-22       Impact factor: 11.277

3.  Phytochrome signaling mechanism.

Authors:  Haiyang Wang; Xing Wang Deng
Journal:  Arabidopsis Book       Date:  2004-07-06

4.  Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop.

Authors:  Pablo Leivar; Elena Monte; Megan M Cohn; Peter H Quail
Journal:  Mol Plant       Date:  2012-04-05       Impact factor: 13.164

5.  Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis.

Authors:  Pablo Leivar; James M Tepperman; Megan M Cohn; Elena Monte; Bassem Al-Sady; Erika Erickson; Peter H Quail
Journal:  Plant Cell       Date:  2012-04-18       Impact factor: 11.277

6.  The Transcriptional Coregulator LEUNIG_HOMOLOG Inhibits Light-Dependent Seed Germination in Arabidopsis.

Authors:  Nayoung Lee; Jeongmoo Park; Keunhwa Kim; Giltsu Choi
Journal:  Plant Cell       Date:  2015-08-14       Impact factor: 11.277

7.  RED AND FAR-RED INSENSITIVE 2, a RING-domain zinc finger protein, mediates phytochrome-controlled seedling deetiolation responses.

Authors:  Mingjie Chen; Min Ni
Journal:  Plant Physiol       Date:  2005-12-29       Impact factor: 8.340

8.  PIL5, a phytochrome-interacting basic helix-loop-helix protein, is a key negative regulator of seed germination in Arabidopsis thaliana.

Authors:  Eunkyoo Oh; Jonghyun Kim; Eunae Park; Jeong-Il Kim; Changwon Kang; Giltsu Choi
Journal:  Plant Cell       Date:  2004-10-14       Impact factor: 11.277

9.  A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors.

Authors:  Rajnish Khanna; Enamul Huq; Elise A Kikis; Bassem Al-Sady; Christina Lanzatella; Peter H Quail
Journal:  Plant Cell       Date:  2004-10-14       Impact factor: 11.277

Review 10.  Light Perception: A Matter of Time.

Authors:  Sabrina E Sanchez; Matias L Rugnone; Steve A Kay
Journal:  Mol Plant       Date:  2020-02-14       Impact factor: 13.164

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