Literature DB >> 19062289

Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness.

Pablo Leivar1, Elena Monte, Yoshito Oka, Tiffany Liu, Christine Carle, Alicia Castillon, Enamul Huq, Peter H Quail.   

Abstract

BACKGROUND: An important contributing factor to the success of terrestrial flowering plants in colonizing the land was the evolution of a developmental strategy, termed skotomorphogenesis, whereby postgerminative seedlings emerging from buried seed grow vigorously upward in the subterranean darkness toward the soil surface.
RESULTS: Here we provide genetic evidence that a central component of the mechanism underlying this strategy is the collective repression of premature photomorphogenic development in dark-grown seedlings by several members of the phytochrome (phy)-interacting factor (PIF) subfamily of bHLH transcription factors (PIF1, PIF3, PIF4, and PIF5). Conversely, evidence presented here and elsewhere collectively indicates that a significant component of the mechanism by which light initiates photomorphogenesis upon first exposure of dark-grown seedlings to irradiation involves reversal of this repression by rapid reduction in the abundance of these PIF proteins, through degradation induced by direct interaction of the photoactivated phy molecule with the transcription factors.
CONCLUSIONS: We conclude that bHLH transcription factors PIF1, PIF3, PIF4, and PIF5 act as constitutive repressors of photomorphogenesis in the dark, action that is rapidly abrogated upon light exposure by phy-induced proteolytic degradation of these PIFs, allowing the initiation of photomorphogenesis to occur.

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Year:  2008        PMID: 19062289      PMCID: PMC2651225          DOI: 10.1016/j.cub.2008.10.058

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  37 in total

1.  Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction.

Authors:  Jonghyun Kim; Hankuil Yi; Goh Choi; Byongchul Shin; Pill-Soon Song; Giltsu Choi
Journal:  Plant Cell       Date:  2003-09-24       Impact factor: 11.277

2.  Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis.

Authors:  Enamul Huq; Bassem Al-Sady; Matthew Hudson; Chanhong Kim; Klaus Apel; Peter H Quail
Journal:  Science       Date:  2004-09-24       Impact factor: 47.728

Review 3.  Light-regulated nuclear localization of phytochromes.

Authors:  Akira Nagatani
Journal:  Curr Opin Plant Biol       Date:  2004-12       Impact factor: 7.834

4.  PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis.

Authors:  Enamul Huq; Peter H Quail
Journal:  EMBO J       Date:  2002-05-15       Impact factor: 11.598

5.  A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors.

Authors:  Rajnish Khanna; Enamul Huq; Elise A Kikis; Bassem Al-Sady; Christina Lanzatella; Peter H Quail
Journal:  Plant Cell       Date:  2004-10-14       Impact factor: 11.277

6.  Biochemical characterization of Arabidopsis complexes containing CONSTITUTIVELY PHOTOMORPHOGENIC1 and SUPPRESSOR OF PHYA proteins in light control of plant development.

Authors:  Danmeng Zhu; Alexander Maier; Jae-Hoon Lee; Sascha Laubinger; Yusuke Saijo; Haiyang Wang; Li-Jia Qu; Ute Hoecker; Xing Wang Deng
Journal:  Plant Cell       Date:  2008-09-23       Impact factor: 11.277

7.  Circadian-controlled basic/helix-loop-helix factor, PIL6, implicated in light-signal transduction in Arabidopsis thaliana.

Authors:  Toru Fujimori; Takafumi Yamashino; Takahiko Kato; Takeshi Mizuno
Journal:  Plant Cell Physiol       Date:  2004-08       Impact factor: 4.927

8.  Pre-germination seed-phytochrome signals control stem extension in dark-grown Arabidopsis seedlings.

Authors:  Teresa Alconada Magliano; Jorge J Casal
Journal:  Photochem Photobiol Sci       Date:  2004-02-18       Impact factor: 3.982

9.  Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis.

Authors:  Diana Bauer; András Viczián; Stefan Kircher; Tabea Nobis; Roland Nitschke; Tim Kunkel; Kishore C S Panigrahi; Eva Adám; Erzsébet Fejes; Eberhard Schäfer; Ferenc Nagy
Journal:  Plant Cell       Date:  2004-05-21       Impact factor: 11.277

10.  The SPA quartet: a family of WD-repeat proteins with a central role in suppression of photomorphogenesis in arabidopsis.

Authors:  Sascha Laubinger; Kirsten Fittinghoff; Ute Hoecker
Journal:  Plant Cell       Date:  2004-08-12       Impact factor: 11.277

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  241 in total

1.  Direct regulation of phytoene synthase gene expression and carotenoid biosynthesis by phytochrome-interacting factors.

Authors:  Gabriela Toledo-Ortiz; Enamul Huq; Manuel Rodríguez-Concepción
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

2.  Phytochrome-imposed oscillations in PIF3 protein abundance regulate hypocotyl growth under diurnal light/dark conditions in Arabidopsis.

Authors:  Judit Soy; Pablo Leivar; Nahuel González-Schain; Maria Sentandreu; Salomé Prat; Peter H Quail; Elena Monte
Journal:  Plant J       Date:  2012-06-11       Impact factor: 6.417

3.  Phytochrome regulates translation of mRNA in the cytosol.

Authors:  Inyup Paik; Seungchan Yang; Giltsu Choi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

4.  Functional profiling identifies genes involved in organ-specific branches of the PIF3 regulatory network in Arabidopsis.

Authors:  Maria Sentandreu; Guiomar Martín; Nahuel González-Schain; Pablo Leivar; Judit Soy; James M Tepperman; Peter H Quail; Elena Monte
Journal:  Plant Cell       Date:  2011-11-22       Impact factor: 11.277

5.  Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop.

Authors:  Pablo Leivar; Elena Monte; Megan M Cohn; Peter H Quail
Journal:  Mol Plant       Date:  2012-04-05       Impact factor: 13.164

6.  Branching of the PIF3 regulatory network in Arabidopsis: roles of PIF3-regulated MIDAs in seedling development in the dark and in response to light.

Authors:  Maria Sentandreu; Pablo Leivar; Guiomar Martín; Elena Monte
Journal:  Plant Signal Behav       Date:  2012-04-01

7.  Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis.

Authors:  Pablo Leivar; James M Tepperman; Megan M Cohn; Elena Monte; Bassem Al-Sady; Erika Erickson; Peter H Quail
Journal:  Plant Cell       Date:  2012-04-18       Impact factor: 11.277

8.  A quartet of PIF bHLH factors provides a transcriptionally centered signaling hub that regulates seedling morphogenesis through differential expression-patterning of shared target genes in Arabidopsis.

Authors:  Yu Zhang; Oleg Mayba; Anne Pfeiffer; Hui Shi; James M Tepperman; Terence P Speed; Peter H Quail
Journal:  PLoS Genet       Date:  2013-01-31       Impact factor: 5.917

9.  PCH1 and PCHL Directly Interact with PIF1, Promote Its Degradation, and Inhibit Its Transcriptional Function during Photomorphogenesis.

Authors:  Mei-Chun Cheng; Beatrix Enderle; Praveen Kumar Kathare; Rafya Islam; Andreas Hiltbrunner; Enamul Huq
Journal:  Mol Plant       Date:  2020-02-13       Impact factor: 13.164

10.  Arabidopsis COP1 and SPA genes are essential for plant elongation but not for acceleration of flowering time in response to a low red light to far-red light ratio.

Authors:  Sebastian Rolauffs; Petra Fackendahl; Jan Sahm; Gabriele Fiene; Ute Hoecker
Journal:  Plant Physiol       Date:  2012-10-23       Impact factor: 8.340

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