Literature DB >> 28070706

Analysis of 12 X-STR loci in the population of south Croatia.

Gordan Mršić1,2, Petar Ozretić3, Josip Crnjac4, Siniša Merkaš1,2, Ivana Račić1,2, Sara Rožić1,2, Viktorija Sukser1,2, Maja Popović5, Marina Korolija6,7.   

Abstract

The aim of the study was to assess forensic pertinence of 12 short tandem repeats (STRs) on X-chromosome in south Croatia population. Investigator® Argus X-12 kit was used to co-amplify 12 STR loci belonging to four linkage groups (LGs) on X-chromosome in 99 male and 98 female DNA samples of unrelated donors. PCR products were analyzed by capillary electrophoresis. Population genetic and forensic parameters were calculated by the Arlequin and POPTREE2 software, and an on-line tool available at ChrX-STR.org. Hardy-Weinberg equilibrium was confirmed for all X-STR markers in female samples. Biallelic patterns at DXS10079 locus were detected in four male samples. Polymorphism information content for the most (DXS10135) and the least (DXS8378) informative markers was 0.9212 and 0.6347, respectively. In both male and female samples, combined power of discrimination exceeded 0.999999999. As confirmed by linkage disequilibrium test, significant association of marker pair DXS10074-DXS10079 (P = 0.0004) within LG2 and marker pair DXS10101-DXS10103 (P = 0.0003) within LG3 was found only in male samples. Number of observed haplotypes in our sample pool amounted 3.01, 7.53, 5 and 3.25% of the number of possible haplotypes for LG1, LG2, LG3 and LG4, respectively. According to haplotype diversity value of 0.9981, LG1 was the most informative. In comparison of south Croatia with 26 world populations, pair-wise [Formula: see text] values increase in parallel with geographical distance. Overall statistical assessment confirmed suitability of Investigator® Argus X-12 kit for forensic casework in both identification and familial testing in the population of south Croatia.

Keywords:  Forensics; Investigator® Argus X-12; Population study; South Croatia; X-STR

Mesh:

Year:  2017        PMID: 28070706     DOI: 10.1007/s11033-017-4096-1

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  35 in total

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Journal:  Forensic Sci Int Genet       Date:  2008-10-26       Impact factor: 4.882

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Journal:  Forensic Sci Int Genet       Date:  2011-04-02       Impact factor: 4.882

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Journal:  Forensic Sci Int Genet       Date:  2011-04-03       Impact factor: 4.882

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Authors:  C Tomas; I Skitsa; E Steinmeier; L Poulsen; A Ampati; C Børsting; N Morling
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Authors:  Krzysztof Rębała; Svetlana A Kotova; Veranika I Rybakova; Tatsiana V Zabauskaya; Alena A Shyla; Alena A Spivak; Iosif S Tsybovsky; Zofia Szczerkowska
Journal:  Forensic Sci Int Genet       Date:  2015-01-03       Impact factor: 4.882

10.  Genetic analysis of 12 X-chromosome STRs in Western Mediterranean populations.

Authors:  J F Ferragut; K Bentayebi; J A Castro; C Ramon; A Picornell
Journal:  Int J Legal Med       Date:  2014-09-11       Impact factor: 2.686

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  1 in total

1.  Investigation of 12 X-STR loci in Mongolian and Eastern Han populations of China with comparison to other populations.

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Journal:  Sci Rep       Date:  2018-03-09       Impact factor: 4.379

  1 in total

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