Inanc Ortac1, Dmitri Simberg, Ya-san Yeh, Jian Yang, Bradley Messmer, William C Trogler, Roger Y Tsien, Sadik Esener. 1. Department of Electrical and Computer Engineering, ‡UC San Diego Moores Cancer Center, §Department of Bioengineering, ∥Department of Chemistry and Biochemistry, ⊥Howard Hughes Medical Institute and Department of Pharmacology, and ¶Department of Nanoengineering, University of California , San Diego, 9500 Gilman Drive, La Jolla, California 92093, United States.
Abstract
Although enzymes of nonhuman origin have been studied for a variety of therapeutic and diagnostic applications, their use has been limited by the immune responses generated against them. The described dual-porosity hollow nanoparticle platform obviates immune attack on nonhuman enzymes paving the way to in vivo applications including enzyme-prodrug therapies and enzymatic depletion of tumor nutrients. This platform is manufactured with a versatile, scalable, and robust fabrication method. It efficiently encapsulates macromolecular cargos filled through mesopores into a hollow interior, shielding them from antibodies and proteases once the mesopores are sealed with nanoporous material. The nanoporous shell allows small molecule diffusion allowing interaction with the large macromolecular payload in the hollow center. The approach has been validated in vivo using l-asparaginase to achieve l-asparagine depletion in the presence of neutralizing antibodies.
Although enzymes of nonhuman origin have been studied for a variety of therapeutic and diagnostic applications, their use has been limited by the immune responses generated against them. The described dual-porosity hollow nanoparticle platform obviates immune attack on nonhuman enzymes paving the way to in vivo applications including enzyme-prodrug therapies and enzymatic depletion of tumor nutrients. This platform is manufactured with a versatile, scalable, and robust fabrication method. It efficiently encapsulates macromolecular cargos filled through mesopores into a hollow interior, shielding them from antibodies and proteases once the mesopores are sealed with nanoporous material. The nanoporous shell allows small molecule diffusion allowing interaction with the large macromolecular payload in the hollow center. The approach has been validated in vivo using l-asparaginase to achieve l-asparagine depletion in the presence of neutralizing antibodies.
While enzymes
of nonhuman origin
are attractive for therapeutic applications, their clinical use has
been limited due to the immune response against nonhuman proteins.[1,2] Different formulations of nonhuman enzymes have shown promise for
the treatment of various types of cancer.[3−6] For example, the treatment of
solid or metastatic tumors could benefit from enzyme-prodrug therapies
using nonhuman enzymes that convert a noncytotoxic prodrug into its
toxic forms at the tumor site by a highly specific localized enzymatic
reaction.[1,7] Another treatment option, which employs
nonhuman enzymes, is the depletion of amino acids essential to tumors.
This can lead to tumor apoptosis with minimal side effects to normal
cells. It is well established that many tumors, including liquid ones,
exhibit deficiencies in one or more amino acid synthesis routes, forcing
the tumors to rely on an extra-cellular pool of the amino acids for
survival and to satisfy protein biosynthesis demands.[3−5] However, the very ability of nonhuman enzymes to achieve these specific
functions causes them to be cleared rapidly or neutralized by the
body’s immune response, thereby causing failure of these therapies
in the clinic.[8,9]Therefore, nonhuman enzyme
based therapies critically need efficient
delivery platforms that can allow stealth operation. This requires
preventing antibody and other blood protein access to enzymes, while
allowing these enzymes the ability to freely interact with their substrates.
Ideally, the delivery approach must be realized at low cost and complexity
without compromising flexibility in design.Current techniques
that aim to prevent immune response created
against nonhuman enzymes mainly rely on two general approaches. In
the first approach, the enzymes are directly modified with polymers
such as polyethylene glycol (PEG)[10,11] or nanometer
scale inorganic/organic networks such as in the case of single enzyme
nanoparticles (SENs).[12,13] Typically with PEG functionalization,
which is limited to systemic delivery routes, the activity of the
enzymes is reduced significantly although circulation half-life is
increased and reduction in immunogenicity is observed compared to
the unprotected enzymes.[14] The drawbacks
of this approach include antibody generation against PEG, weak retention
at the target site, degradation of PEG, and more importantly, the
need for extensive optimization of the conjugation chemistry specific
for each enzyme type remains a very costly undertaking.[14] SENs also suffer from weak retention at the
target site and are applicable only to a limited number of enzymes.[13]In a second approach that promises lower
cost and more generality,
enzymes are encapsulated within a protecting structure, which either
releases the enzyme at the target[15−18] or allows substrate to access
the enzyme.[19−23] The approaches that depend on release of the enzymes often suffer
from nonspecific release as well as inefficient synthesis and loading.[15−18] Indeed, the encapsulation of enzymes in nano- and mesoporous matrices
made of materials such as silica,[20,24] polyelectrolyte,[22] or polymer[19] and
inorganic hollow nanoparticles such as gold[23] have been widely studied. However, these approaches also suffer
from limitations, which include low loading efficiencies, reduced
activity of the enzymes as a result of immobilization and encapsulation
chemistries, stability, toxicity, and applicability issues.[20−23] In addition, these approaches can only be applied to a small number
of enzymes due to harsh chemistries involved in the loading process.[20,23] Furthermore, most of these applications are limited to a narrow
range of sizes and materials.[15−17,20−24] To succeed in the therapy of multidimensional diseases, such as
cancer, a generalized nanocarrier platform needs to address all these
requirements simultaneously.In this paper, a robust manufacturing
approach is introduced for
a versatile class of nanoparticles that can lead to a universal in
vivo delivery platform for nonhuman enzymes. The platform exhibits
key necessary features including exquisite control in synthesis; high
enzyme entrapment capacity; efficient protection from neutralization,
antibody access, and proteolysis; unperturbed in vivo enzyme activity;
and long in-tissue-residence and stability. We describe the fabrication
of dual-porosity hollow nanoparticles called synthetic hollow mesoporous
nanospheres (SHMS), which consist of nanoporous (pore size <2 nm)[25] material and at the same time have a mesoporous
(pore size, 5–50 nm)[25] shell (Figure1A). The nanoporous shell is suitable for diffusion
of small molecules while preventing large molecule trafficking. On
the other hand, the larger mesopores on these SHMS can be designed
large enough to enable the hollow core of the nanoparticle to be efficiently
loaded with large molecules (Figure 1A). Once
loaded, the mesopores are sealed with the same nanoporous material,
thus forming synthetic hollow enzyme loaded nanospheres (SHELS) encapsulating
the large molecule payload. SHELS behave like nano tea bags selectively
enabling the payload to interact freely and effectively with smaller
molecules in the environment through their nanoporous shells while
preventing the escape of the large molecule payload (Figure 1B).
Figure 1
Scanning electron micrographs of (A) Synthetic hollow
mesoporous
nanospheres (SHMS) and (B) SHELS. Scale bar refers to both (A) and
(B). (C) Enzymes encapsulated within the hollow core of SHELS cannot
escape. As depicted in the inset, showing the blow-up of a section
of SHELS, the small molecule substrate (red dots) can diffuse through
the nanoporous shell, interact with the enzyme and diffuse out of
SHELS modified (blue dots).
Scanning electron micrographs of (A) Synthetic hollow
mesoporous
nanospheres (SHMS) and (B) SHELS. Scale bar refers to both (A) and
(B). (C) Enzymes encapsulated within the hollow core of SHELS cannot
escape. As depicted in the inset, showing the blow-up of a section
of SHELS, the small molecule substrate (red dots) can diffuse through
the nanoporous shell, interact with the enzyme and diffuse out of
SHELS modified (blue dots).Although SHELS can be manufactured with a variety of materials,
we show here that SHELS can be produced from silica with a high yield
and scalable synthesis method that utilizes a templating reaction
on unmasked parts of the shell surface. Nanomasking is used for the
formation of mesopores in the a few nanometers to 50 nm size range
with precise control in the masked regions of silica SHMS. We show
that once sealed silica SHELS effectively encapsulate enzymes while
smaller substrates easily reach, interact with, and are modified by
the encapsulated enzymes within the hollow core and diffuse out (Figure 1C). We specifically show that silica SHELS protect
immunogenic enzymes from antibody access, neutralization, and proteolysis
without loss of functionality in serum immunized against the load
for at least two weeks. The experiments demonstrate in vivo localized
activity in addition to in-tissue-residence time of about two months
when SHELS are injected intramuscularly. Because SHELS are thin hollow
nanospheres, little inorganic mass is introduced minimizing toxicity
risks while maximizing load entrapment capacity.
Nanomasking Process and
Fabrication of Synthetic Hollow Mesoporous
Nanospheres (SHMS)
The use of colloidal particles with hollow
interiors has been considered promising for the controlled release
of drugs and biological molecules, for immune isolation and protection
of biomolecules and of biologically active species, and for waste
removal[26−33] due to their high surface area and hollow interior for loading and
templating.[26,27,34] The fabrication of porous hollow particles is commonly reported
using template-based synthesis approaches with materials such as vesicular
solution, colloids, emulsion droplets, and polymers as templates for
forming a layer of target material or its precursor. The core material
is subsequently removed by methods such as calcination and dissolution
to generate the hollow shell.[35−37] However, a flexible fabrication
approach that allows for the synthesis of hollow particles with a
broad range of precise size and specific dual porosity has yet to
be developed.With the existing methods, porosity is primarily
defined by the shell material resulting in pores of up to a few nanometers
in size.[38−40] This results in relatively low permeability, preventing
the diffusion of macromolecules such as enzymes, proteins, or larger
biologically active materials.[30] Other
approaches exist to create mesoporous particles reaching porosities
of several tens of nanometers; however these techniques lack precise
control of the pore size and are not applicable to nanopore diameters.
These methods also have constraints in the overall particle dimensions.[30,33] Such approaches typically use a specific property of a given material
to create porosity and do not provide a generalized method that can
be applied to a large selection of materials. Therefore, a generalized
fabrication technique for synthesizing porous particles with any desired
specific dimensions, materials and porosity is needed to further expand
the potential applications of these particles.Nanomasking is
a template-based approach that can potentially use
a variety of materials to prepare hollow particles with monodisperse
sizes ranging from 10 to 20 nm to micrometers and with surface pores
of controllable sizes from a few nanometers to tens of nanometers.
With nanomasking method, SHMS can be manufactured with a precise control
in size and permeability in a wide range of scales with various materials.
In this approach, blocking materials prevent the growth reaction on
parts of the surface and concomitantly create mesopore features on
the surface. This technique provides independent control of the particle
permeability and size. The overall size of the particle is determined
by the template particle. The diameter of the pores can be adjusted
by varying the size of the masking particle, and the number of mesopores
on the particle surface is controlled by the relative molar concentration
of template and masking particles.Silica was selected as a
suitable and practical material to demonstrate
SHMS and SHELS because of its biodegradability, biocompatibility and
low toxicity thus making it suitable for in vivo applications.[38,41−43] In addition, silica has adjustable porosity, thermal
and mechanical stability, low density, and high specific surface area.[15,16,44,45]For silica SHMS, amine-functionalized polystyrene nanoparticles
are used as templates for nucleating growth of the nanoporous silica
solgel network.[37] Tetramethoxysilane (TMOS)
is hydrolyzed in aqueous solution to give silicic acid, which acts
as a precursor for the polycondensation reaction on the particle’s
surface. The initial chemistry of the process is shown below[37]The synthesis approach is demonstrated in Figure 2. In order to generate the SHMS structure, carboxy-functionalized
polystyrene latex nanoparticles as nanomasks are first mixed with
larger templates (Figure 2A.1). Particles with
oppositely charged surface functional groups attract each other in
solution, causing aggregation (Figure 2A.2).
Figure 2
Nanomasking
method (A) 1. Amine-functionalized polystyrene nanoparticles
(templates) and carboxy-functionalized polystyrene nanoparticles (nanomasks)
are mixed in solution. 2. Templates and nanomasks attract each other
resulting in aggregation. 3. Followed by addition of sol–gel
reactants, the silica polycondensation reaction occurs on the basic
template surface while nanomasks block the reaction at the point of
contact with the templates. 4. Polymer templates and nanomasks are
removed by calcination or dissolution to generate SHMS structure.
(B) Scanning electron micrograph of aggregated templates and nanomasks.
(C) Scanning electron micrograph of silica SHMS. Scale bar refers
to both (B) and (C).
Nanomasking
method (A) 1. Amine-functionalized polystyrene nanoparticles
(templates) and carboxy-functionalized polystyrene nanoparticles (nanomasks)
are mixed in solution. 2. Templates and nanomasks attract each other
resulting in aggregation. 3. Followed by addition of sol–gel
reactants, the silica polycondensation reaction occurs on the basic
template surface while nanomasks block the reaction at the point of
contact with the templates. 4. Polymer templates and nanomasks are
removed by calcination or dissolution to generate SHMS structure.
(B) Scanning electron micrograph of aggregated templates and nanomasks.
(C) Scanning electron micrograph of silica SHMS. Scale bar refers
to both (B) and (C).Figure 2B shows a scanning electron
micrograph
(SEM) micrograph of the framework for SHMS synthesis made up of 500
nm templates and 100 nm nanomasks. The basic nature of the amine-functionalized
surface creates a more efficient nucleation site for base-catalyzed
silica gel growth compared to the acidic carboxy functionalized surface.
At the point of contact, they serve as negatively charged nanomasks
for the sol–gel reaction on the particle surface (Figure 2A.3).Once the silica layer is formed with
the desired thickness, the
polystyrene particles are removed by dissolution or calcination leaving
the silica SHMS structure (Figure 2A.4). Resultant
SHMS are shown in the SEM micrograph in Figure 2C. Later, the SHMS are resuspended and dispersed in water using vortex
mixing and gentle sonication. The final particle diameter after calcination
is about 85% of the diameter of the initial 500 nm template nanoparticles,
which may be related to partial dehydration of the silica gel hydroxyl
groups during heating or extraction with anhydrous solvents.[44]The structural properties of SHMS are
shown in Figure 3. Higher-resolution electron
micrographs taken using
the secondary electron mode of a scanning transmission electron microscope
(STEM) and a transmission electron microscope (TEM) are presented
in Figure 3A,B, respectively, revealing the
structure of the generated holes. Silica formation is blocked around
the point of contact between two particles, and the curvature of the
nanomask surface is reflected by the surface topography of the resultant
particle (Figure 3A). The synthesis using 500
nm templates with a TMOS-to-template-weight ratio of 3:1 results in
silica shells with a thickness of ∼25 nm. This thickness seems
to yield stable particles in this size range. The open-hole structure
throughout the shell and the thickness of the shell are illustrated
by the scanning electron micrograph of a cracked SHMS from the interior
perspective in Figure 3C.
Figure 3
(A–E) Electron
micrographs of silica synthetic hollow mesoporous
nanospheres (SHMS) made from 500 nm templates and 100 nm. (A) Electron
micrograph revealing the surface topography of SHMS taken with secondary
electron mode of scanning transmission electron microscope (STEM).
(B) Transmission electron micrograph of a SHMS. (C) Scanning electron
microscope (SEM) image of a cracked SHMS showing the holes from the
interior perspective. (D) SHMS made by 500 nm templates and 100 nm
nanomasks with the particle number ratio of 1:30 and (E) 1:15. SHMS
made by (F) 500 nm templates and 60 nm nanomaks, (G) 200 nm templates
and 40 nm nanomasks, (I) 100 nm templates and 20 nm nanomasks.
(A–E) Electron
micrographs of silica synthetic hollow mesoporous
nanospheres (SHMS) made from 500 nm templates and 100 nm. (A) Electron
micrograph revealing the surface topography of SHMS taken with secondary
electron mode of scanning transmission electron microscope (STEM).
(B) Transmission electron micrograph of a SHMS. (C) Scanning electron
microscope (SEM) image of a cracked SHMS showing the holes from the
interior perspective. (D) SHMS made by 500 nm templates and 100 nm
nanomasks with the particle number ratio of 1:30 and (E) 1:15. SHMS
made by (F) 500 nm templates and 60 nm nanomaks, (G) 200 nm templates
and 40 nm nanomasks, (I) 100 nm templates and 20 nm nanomasks.This fabrication procedure can
be applied to particles with different
features in a wide range of sizes from 10 to 20 nm to several micrometers.
There are three main degrees of freedom in the fabrication of SHMS:
the number of mesopores on the surface (Figure 3D,E), diameter of the mesopores (Figure 3F),
and overall particle size (Figure 3G–I).
The average number of mesopores on the surface is controlled by the
relative molar concentration of templates and nanomasks. SEM micrographs
in Figure 3E,F show the mesopore distribution
on the surface when the template-to-nanomask molar ratios in solution
are 1:30 and 1:15, respectively. These ratios result in 25–30
holes per particle for the 1:30 ratio (Figure 3E) and 10–15 holes per particle for the 1:15 ratio (Figure 3F). The size of the holes created on the surface
can be adjusted by selecting nanomasks with different diameters independently
of the overall diameter of the SHMS. Figure 3E,F shows mesopores created using nanomasks with diameters of 100
nm, and Figure 3G shows particles created using
nanomasks with 60 nm diameters, all on 500 nm templates. The use of
100 nm nanomasks produces mesopores of 30 ± 4 nm in diameter,
and the use of 60 nm nanomasks produces mesopores of 20 ± 3 nm
in diameter at the point of contact. Nanomasks down to 20 nm in diameter
are available commercially, theoretically yielding mesopores down
to several nanometers with high accuracy. The overall size of the
SHMS depends on the template particle size, and templates can be obtained
in a wide range of sizes. Figure 3G shows particles
made with 500 templates and 100 nm nanomasks. Figure 3H shows particles made with 200 nm templates and 40 nm nanomasks.
Figure 3I shows particles made with 100 nm
templates and 20 nm nanomasks.All template and nanomask particle
combinations resulted in mesopores
about 25–35% of the diameter of the initial nanomasks, decreasing
slightly with smaller dimensions. The slight decrease for smaller
nanomasks might be related to the particles’ increasing surface
curvature, resulting in a smaller point of contact. The diameter of
the mesopores formed on the SHMS fabricated using the 200 nm template/40
nm nanomask pair is 12 ± 2 nm (Figure 3H), whereas the diameter of the mesopores formed on the SHMS fabricated
using the 100 nm template/20 nm nanomask pair is 5 ± 3 nm (Figure 3I). Removal of the core by calcination results in
an isotropic shrinking of hydrated SHMS. The fabrication approach
results in monodisperse and uniform particles for all three sizes,
as shown in the electron micrographs in Figure 3G–I; the particles’ monodispersity in suspension was
validated by dynamic light scattering (see Supporting
Information, Figure S1). Dynamic light scattering measurements
yield average hydrodynamic radii of 110 ± 5, 221 ± 8, and
534 ± 13 nm for particles made with 100, 200, and 500 nm templates,
respectively. Their polydispersity indexes end up 0.120 ± 0.011,
0.134 ± 13, 0.111 ± 22, respectively.
Loading, Sealing,
and Formation of SHELS
SHMS are loaded
by diffusion of macromolecules through their mesopores (Figure 4.A). As the mesopores are relatively large (typically
>5 nm) compared to many enzymes, enzymes can diffuse freely and
quickly
into the structure to equilibrate the concentration inside and outside
of SHMS (Figure 4.B). Later, a new layer of
nanoporous material is formed around the particle surface, closing
the mesopores within the nanoporous surface (Figure 4.C). In the case of silica, the SHMS surface is negatively
charged due to SiO– groups. A positively charged
polymer such as poly-l-lysine is added to adsorb to the surface
of the particles and change the surface charge to positive. TMOS is
then added to grow new silica on the surface and close the mesopores
of SHMS, converting them to SHELS. This reaction occurs in near-neutral
buffer conditions and does not damage the enzyme. Once the mesopores
are closed, the load is encapsulated within SHELS and cannot escape
(Figure 4.D). However, the load can still interact
with small molecules in the surrounding environment via diffusion
through nanopores.
Figure 4
The sealing concept and SHELS. Illustrations show the
cross sections.
(A) Empty SHMS. (B) High concentration of enzyme is added to the SHMS
suspension and diffuses into the hollow interior of SHMS. The inset
shows a blowup of a part of SHMS, depicting an enzyme diffusing through
a mesopore. (C) Interior enzyme concentration is equilibrated with
exterior. Poly-l-lysine is added to convert the surface charge.
(D) SHMS are coated with another layer of porous material sealing
enzymes within the particle.
The sealing concept and SHELS. Illustrations show the
cross sections.
(A) Empty SHMS. (B) High concentration of enzyme is added to the SHMS
suspension and diffuses into the hollow interior of SHMS. The inset
shows a blowup of a part of SHMS, depicting an enzyme diffusing through
a mesopore. (C) Interior enzyme concentration is equilibrated with
exterior. Poly-l-lysine is added to convert the surface charge.
(D) SHMS are coated with another layer of porous material sealing
enzymes within the particle.This capability provides two unique benefits, as discussed
in the
next section. First, the enzyme is essentially hidden from the immune
system because antibodies are too large to pass through the nanopores.
Therefore, the enzyme is protected from the immune system and from
digesting enzymes, such as proteases, while remaining completely active.
Second, SHELS can be coated with passivating and targeting ligands
without any chemical modification of the payload, making them a simple
yet effective vehicle for in vivo applications.
Characterization
of SHELS Loading, Enzymatic Activity and Protection
Abilities
Penicillinase from Bacillus cereus is a member of the family of beta-lactamases that catalyze the hydrolysis
of the beta-lactam ring.[46]B. cereus penicillinase was selected for the characterization of SHELS because
it is the preferred beta-lactamase for enzyme-prodrug based therapies,[6,7,47] and sensitive chromogenic and
fluorogenic assays are available.[48] The
latter used the substrate CCF2, which contains a coumarin linked to
fluorescein via a cephalosporin group. Before cleavage by penicillinase,
excitation of the coumarin at 409 nm causes efficient fluorescence
resonance energy transfer (FRET) to fluorescein, resulting in green
emission peaking around 520 nm. Penicillinase cleaves the cephalosporin
group, separating fluorescein from coumarin and disrupting FRET, so
that the same excitation produces blue 447 nm emission from coumarin.
CCF2 is sold commercially as an acetoxymethyl (AM) ester, which rapidly
reverts to CCF2 on exposure to esterases in rodent plasma and serum,
as well as inside cells.[48,49]Figure 5.A shows activity of penicillinase (MW = 28 kDa)
enzyme encapsulated within SHELS. All samples were exposed to proteinase-K,
which digests proteins (see Supporting Information, Figure S2); therefore, sustained activity of the encapsulated enzyme
after exposure to proteinase-K demonstrates protection of the enzyme
against proteolysis by encapsulation in SHELS.
Figure 5
(A) Activity comparison
for SHELS with encapsulated penicillinase
and CCF2-AM as substrate in normal serum. From the left: first group,
hollow silica nanospheres (SHS); second group, SHMS; third group,
sealed SHS; fourth group, SHELS. (B) Polyclonal antibody binding against
encapsulated penicillinase. Dark blue bars represent the fluorescence
from Alexa 488 with streptavidin that can attach antibody molecules
with biotin. Light blue bars represent fluorescence from Cy5 labeled
penicillinase. (Left) Penicillinase adsorbed on the surface of hollow
silica nanospheres. (Right) Penicillinase encapsulated within silica
SHELS, which was incubated with proteinase-K followed by successive
washing before measurement. (C) Two hundred nanometer hollow silica
nanospheres. (D) SHMS made with 200 templates and 40 nm . (E) SHELS
made by sealing SHMS similar to (D). Error bar refers to panels C–E.
Error bars correspond to standard deviation of at least three replicate
experiments.
(A) Activity comparison
for SHELS with encapsulated penicillinase
and CCF2-AM as substrate in normal serum. From the left: first group,
hollow silica nanospheres (SHS); second group, SHMS; third group,
sealed SHS; fourth group, SHELS. (B) Polyclonal antibody binding against
encapsulated penicillinase. Dark blue bars represent the fluorescence
from Alexa 488 with streptavidin that can attach antibody molecules
with biotin. Light blue bars represent fluorescence from Cy5 labeled
penicillinase. (Left) Penicillinase adsorbed on the surface of hollow
silica nanospheres. (Right) Penicillinase encapsulated within silica
SHELS, which was incubated with proteinase-K followed by successive
washing before measurement. (C) Two hundred nanometer hollow silica
nanospheres. (D) SHMS made with 200 templates and 40 nm . (E) SHELS
made by sealing SHMS similar to (D). Error bar refers to panels C–E.
Error bars correspond to standard deviation of at least three replicate
experiments.In Figure 5.A, the left-most bar represents
silica synthetic hollow nanospheres (SHS) fabricated by sol–gel
templation over 200-nm templates without mesopores on the surface.[37] Therefore, enzymes can only be adsorbed on the
surface (Figure 5.C). The second bar from the
left represents SHMS made with 200-nm templates and 40-nm nanomasks
(Figure 5.D). Both SHS and SHMS were incubated
with 26.4 μM B. cereus penicillinase solution.
The third and fourth bars from the left (Figure 5.E) represent particles similar to SHS and SHMS, respectively, except
that the sealing reaction was performed after enzyme incubation, thereby
encapsulating enzymes within the structure. Later, all four groups
were washed successively, removing unbound and free enzymes, and subsequently
incubated with proteinase-K to remove the enzyme molecules stuck on
the surface.SHS and SHMS exhibit no or very little activity
(Figure 5.A), which is expected after exposure
to proteinase-K.
Sealed SHS show about a 2-fold increase in activity over SHS; this
is brought about by the protection provided by the second layer of
silica over the enzymes stuck on the surface and thereby supporting
the protective effect of the additional sealing silica layer. However,
there is a significant increase in activity in SHELS (outlined in
red). The 10-fold activity increase of SHELS over sealed SHS indicates
that the increase is not due to the enzyme covering the surface but
rather is caused by the enzyme molecules filling the hollow interior.
This dramatic difference between SHMS and SHELS clearly establishes
the superiority of using SHELS, as both samples have gone through
the same process except for the additional sealing step on SHELS.With the current protocol, comparing with the standard curve of
free B. cereus penicillinase (see Supporting Information, Figure S3), the measured activity
corresponds to 6 × 10–14 international units
(IU) from a single 200 nm SHELS corresponding to ∼67 enzyme
molecules per particle (see Supporting Information, Figure S4). During enzyme loading, SHMS were initially incubated
with 26.4 μM enzyme solution. The assayed concentration of enzyme
within a single SHELS corresponds to ∼26 μM, resulting
in a 98–100% match with the exterior loading concentration.
This result also shows that there is no measurable loss of activity
of enzyme during the loading and sealing process or by hindered diffusion
of substrate through the nanoporous shell in this interior concentration
of enzyme. With this procedure, we have shown that it is feasible
to achieve >1500 mg/g enzyme entrapment capacity in silica SHELS
using B. cereus penicillinase (MW 28 KDa) (see Supporting Information, Figures S5 and S6). The
evaluation
of entrapment capacity for different enzymes with varying molecular
weights needs further investigation.Figure 5.B evaluates antibody access to
the enzyme encapsulated in SHELS. For this demonstration, the penicillinase
was fluorescently labeled with Cy5, and its accessibility was probed
with a rabbit polyclonal biotinylated antibody against penicillinase,
detected by Alexa488 labeled streptavidin. The dark blue bar on the
left-hand side depicts fluorescence from enzyme molecules adsorbed
on the surface of SHS, while the dark blue bar on the right-hand side
depicts fluorescence from penicillinase enzymes encapsulated within
SHELS. Both sets were incubated with proteinase-K to remove any enzyme
that might have been stuck on the surface and were washed several
times to remove unbound enzymes. The light blue bars are Alexa488
fluorescence intensities that represent antibody binding. In the case
of surface-adsorbed penicillinase, significant antibody binding is
observed. However, when penicillinase is encapsulated within SHELS,
no such antibody binding is observed. Although the amount of encapsulated
penicillinase within SHELS is about 2.5 times more than surface-absorbed
penicillinase on hollow shells, the lack of antibody binding demonstrates
the prevention of antibody access to the enzymes encapsulated within
SHELS.To determine the effect of serum containing neutralizing
antibodies
on the encapsulated enzyme within SHELS in Figure 6A we compared the activity of the free penicillinase and penicillinase
encapsulated within SHELS on nitrocefin (50 μg/mL) in the presence
of serial dilutions of serum obtained from immunized mice with penicillinase
(see Supporting Information for immunization
protocol). The activity of each group was adjusted to 2.5 IU/ml in
preimmunization serum, and the neutralization is reported as the ratio
of the activity in serums post- to preimmunization. There were around
4 × 109 particles in the SHELS set, making around
4.5 μg of silica. Free penicillinase activity decayed rapidly
after dilutions of less than 1:10 000, with activity reduced
to less than 5% for all dilutions less than 1:1000. However, even
in neat immunized serum, the activity of SHELS was greater than 50%,
demonstrating the protection of enzymes against neutralizing antibodies
by SHELS encapsulation. The gradual reduction in SHELS activity as
serum dilutions decreased may be due to opsonins coating the surface
of SHELS, thereby reducing the diffusion of substrate through the
nanoporous shell. This result clearly shows the protection of enzymes
against neutralizing antibodies by SHELS encapsulation.
Figure 6
(A) Neutralization
test in the presence of antibodies. The ratios
of activity on nitrocefin (50 μg/mL) in serums post- to preimmunization
are used as the vertical axis. Circles, free penicillinase; diamonds,
penicillinase encapsulated SHELS with bare silica surface. (B) Sustained
activity of penicillinase loaded SHELS for 15 days with the presence
(triangles) and without the presence (squares) of proteinase-K in
serum from mice immunized with penicillinase previously. (C) Demonstration
of in vivo activity of Gaussia princeps luciferase
encapsulated in SHELS labeled with Cyanine 7 (Cy7) dye. Fifty microliters
of Gaussia princeps luciferase (GaLuc) enzyme encapsulated
SHELS solution with a concentration of ∼4 × 10[12] particles/ml was injected subcutaneously into
BALB/c mice, followed by lateral tail vein injection of 150 μg
native-coelenterazine after 5 min. (Left) Cy7 fluorescence overlaid
with illuminated image. (Right) Native-coelenterazine luminescence
overlaid with illuminated image. (D) Localization of intramuscularly
injected penicillinase loaded SHELS labeled with Cy7 at days 0, 15,
30, and 45. Error bars correspond to standard deviation of at least
three replicate experiments. (E) In vivo l-asparagine depletion
in naïve mice. Free Elspar (circles)
and SHELS-Elspar (diamonds) were injected intramuscularly
into naïve mice with equivalent units of activity. Serum l-asparagine level pre and post injection up to 8 days was measured.
(F) In vivo l-asparagine depletion in passively immunized
mice. Free Elspar (circles) and SHELS-Elspar (diamonds) were injected intramuscularly to passively immunized
mice with equivalent units of activity. Serum l-asparagine
level pre and post injection up to 8 days was measured. Error bars
correspond to standard deviation of at least three replicate experiments.
(A) Neutralization
test in the presence of antibodies. The ratios
of activity on nitrocefin (50 μg/mL) in serums post- to preimmunization
are used as the vertical axis. Circles, free penicillinase; diamonds,
penicillinase encapsulated SHELS with bare silica surface. (B) Sustained
activity of penicillinase loaded SHELS for 15 days with the presence
(triangles) and without the presence (squares) of proteinase-K in
serum from mice immunized with penicillinase previously. (C) Demonstration
of in vivo activity of Gaussia princeps luciferase
encapsulated in SHELS labeled with Cyanine 7 (Cy7) dye. Fifty microliters
of Gaussia princeps luciferase (GaLuc) enzyme encapsulated
SHELS solution with a concentration of ∼4 × 10[12] particles/ml was injected subcutaneously into
BALB/c mice, followed by lateral tail vein injection of 150 μg
native-coelenterazine after 5 min. (Left) Cy7 fluorescence overlaid
with illuminated image. (Right) Native-coelenterazine luminescence
overlaid with illuminated image. (D) Localization of intramuscularly
injected penicillinase loaded SHELS labeled with Cy7 at days 0, 15,
30, and 45. Error bars correspond to standard deviation of at least
three replicate experiments. (E) In vivo l-asparagine depletion
in naïve mice. Free Elspar (circles)
and SHELS-Elspar (diamonds) were injected intramuscularly
into naïve mice with equivalent units of activity. Serum l-asparagine level pre and post injection up to 8 days was measured.
(F) In vivo l-asparagine depletion in passively immunized
mice. Free Elspar (circles) and SHELS-Elspar (diamonds) were injected intramuscularly to passively immunized
mice with equivalent units of activity. Serum l-asparagine
level pre and post injection up to 8 days was measured. Error bars
correspond to standard deviation of at least three replicate experiments.To determine whether the protection
from neutralization was transient,
penicillinase-encapsulated SHELS with 10 IU/ml activity were incubated
for 14 days in neat serum obtained from mice immunized with penicillinase.
No loss of activity was observed. Moreover, the addition of proteinase-K
did not affect the activity level, indicating that encapsulated enzymes
were still protected during the experiment (Figure 6B).To determine whether enzymes encapsulated in SHELS
are in a free
state within the hollow interior, embedded within the shell, or adsorbed
on the interior of the shell, the kinetic parameters[50] of encapsulated and free Escherichia colil-asparaginase were compared; (see Supporting Information, Figure S7) both free and encapsulated l-asparaginase followed similar Michaelis–Menten kinetics.[50] The maximum reaction rate achieved by the enzyme–substrate
system at the saturating substrate concentration, Vmax, was 0.3087 μM/min for the encapsulated enzyme
and 0.3108 uM/min for free enzyme. The Michaelis constant, Km, was calculated as 0.001838 mM for encapsulated l-asparaginase and 0.001989 mM for free l-asparaginase.
The turnover number, kcat, was derived
as 108.8 for the encapsulated enzyme and 109.6 for free enzyme. This
similar behavior as verified using multiple constants might indicate
that the majority of the encapsulated enzyme is at a free state within
the nanoparticle’s hollow interior.To confirm the feasibility
of enzymatic therapies with SHELS, protection
against neutralization and sustained activity in the presence of serum
opsonins and other serum proteins are shown next, in addition to in
vivo activity and in-tissue-residence of particles. To demonstrate
such activity in vivo, Gaussia princeps luciferase
encapsulated in SHELS (∼4 × 10[12] particles/ml) labeled with Cyanine 7 (Cy7) dye were injected subcutaneously
into BALB/c mice, followed by lateral tail vein injection of 150 μg
native-coelenterazine after 5 min (Figure 6C). Luminescence intensity was measured 5 min after intravenous injection.
Luminescence from GaLuc (Figure 6C right panel)
was colocalized with the Cy7 fluorescence from SHELS (Figure 6C left panel) proving the in vivo activity of encapsulated
GaLuc. Instability of GaLuc at body temperature prevented the detection
of in vivo enzymatic activity at later time points (see Supporting Information, Figure S8).The
residence time of SHELS in tissue is important for potential
applications such as amino acid depletion therapy. Cy7-labeled SHELS
were injected intramuscularly (Figure 6D) and
repeatedly imaged over 2 months. A gradual clearance extending to
2 months was observed.Finally, to illustrate the activity of
SHELS in a therapeutically
relevant setting, l-asparaginase-loaded SHELS were prepared.
For over 40 years, l-asparaginase from Escherichia
coli has been used to treat acute lymphoblastic leukemia
(ALL) in order to deplete circulating l-asparagine, which,
unlike normal cells, cannot be synthesized by leukemic cells. l-asparagine is converted into aspartic acid and ammonia by l-asparaginase’s selective starving of leukemic cells,
causing cell death.[4] Immune responses generated
against the l-asparaginase are a significant clinical problem
and can cause rapid neutralization and clearance of the enzyme as
well as significant side effects such as hypersensitivity reactions
and anaphylaxis.[4,8,51] Because
an extended residence time in tissue was observed with intramuscular
injection previously, this route of administration was chosen for
testing the systemic depletion of l-asparagine with either
free enzyme or SHELS containing the enzyme. In both cases, the clinically
approved enzyme, brand name Elspar, was used, and
the same total enzyme activity (5 IU) was administered to all mice.
The duration of l-asparagine depletion by equivalent amounts
of Elspar in either naïve (Figure 6E) or passively immunized (Figure 6F) mice was determined. In naïve mice, free enzyme
rapidly depleted the serum l-asparagine and kept it at undetectable
levels for at least two days. By day five, the serum l-asparagine
had recovered completely. Elspar given in SHELS (SHELS-Elspar) produced a more durable l-asparagine depletion
of greater than five days (Figure 6E). When
neutralizing anti-l-asparaginase antibodies (verified in Supporting Information, Figure S9) were given
before free Elspar, l-asparagine depletion
was not observed (Figure 6F). However, SHELS-Elspar was completely unaffected by the prior introduction
of neutralizing antibodies (Figure 6F) verifying
the protected operation of enzymes in therapeutically relevant in
vivo setting.Functionalization of SHELS particle surface to
improve tissue retention,
reduce cell uptake, and protein binding without affecting encapsulated
enzyme activity might further prolong the in vivo activity.
Conclusions
and Future Potential of SHELS
In summary,
SHELS are shown to be a promising platform for encapsulating functional
biomolecules, such as enzymes acting on small molecule substrates
that can freely diffuse in and out through particles’ pores.
SHELS can be manufactured in large quantities with sizes and characteristics
that can be tightly controlled, thus maximizing entrapment capacity
and enzymatic activity. The experimental results show that this porous
shell effectively encapsulates the enzyme payload without affecting
enzyme activity. The shell also protects the payload from specific
and nonspecific interference from large biomolecules in vivo. In addition,
surface modifications of SHELS should be able to enhance circulation
and targeting in vivo without the need for modification of the payload.
As nanomasking provides flexible fabrication of SHELS with control
of particle dimensions and permeability, SHELS can be tailored and
optimized for specific loads and substrates. Moreover, the utilization
of a hollow nanostructure reduces the amount of carrier material introduced
into the body. It has also been shown that the SHELS technology prevents
the neutralization of nonhuman enzymes by antibodies in vivo and can
be used to achieve systemic effects even while these particles remain
localized.The SHELS fabrication approach is general and should
be applicable to many other materials. SHELS made of different materials
can be envisioned being used in a variety of applications, including
nonbiomedical ones such as biocatalysis.For medical applications,
however, toxicity and quantification
of the immune response on SHELS will need further study. The effect
of surface modifications on the activity of the payload remains to
be tested. Indeed, for systemic delivery applications the surface
of SHELS can be further functionalized for targeting and improved
circulation half-life, thereby eliminating the need for chemical modification
of the enzymic payload. Under these conditions, stealth SHELS should
allow continuous and controlled access of the substrate to the native
enzyme cargo, which makes this a promising therapeutic platform for
treating metastatic disease. In addition, SHELS could be applicable
to in vivo medical diagnostics and monitoring. Enzyme-prodrug therapy
and enzymatic depletion of tumor nutrients are among the most promising
applications of SHELS.
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