Literature DB >> 24469792

Functional truncated membrane pores.

David Stoddart1, Mariam Ayub, Lajos Höfler, Pinky Raychaudhuri, Jochen W Klingelhoefer, Giovanni Maglia, Andrew Heron, Hagan Bayley.   

Abstract

Membrane proteins are generally divided into two classes. Integral proteins span the lipid bilayer, and peripheral proteins are located at the membrane surface. Here, we provide evidence for membrane proteins of a third class that stabilize lipid pores, most probably as toroidal structures. We examined mutants of the staphylococcal α-hemolysin pore so severely truncated that the protein cannot span a bilayer. Nonetheless, the doughnut-like structures elicited well-defined transmembrane ionic currents by inducing pore formation in the underlying lipids. The formation of lipid pores, produced here by a structurally defined protein, is supported by the lipid and voltage dependences of pore formation, and by molecular dynamics simulations. We discuss the role of stabilized lipid pores in amyloid disease, the action of antimicrobial peptides, and the assembly of the membrane-attack complexes of the immune system.

Entities:  

Keywords:  alpha-hemolysin; beta-barrel; lipid reorganization; nanopore

Mesh:

Substances:

Year:  2014        PMID: 24469792      PMCID: PMC3932856          DOI: 10.1073/pnas.1312976111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

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Authors:  L Q Gu; S Cheley; H Bayley
Journal:  Science       Date:  2001-01-26       Impact factor: 47.728

2.  Stochastic sensing of organic analytes by a pore-forming protein containing a molecular adapter.

Authors:  L Q Gu; O Braha; S Conlan; S Cheley; H Bayley
Journal:  Nature       Date:  1999-04-22       Impact factor: 49.962

3.  An antimicrobial peptide, magainin 2, induced rapid flip-flop of phospholipids coupled with pore formation and peptide translocation.

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Journal:  Biochemistry       Date:  1996-09-03       Impact factor: 3.162

4.  Single-molecule DNA detection using a novel SP1 protein nanopore.

Authors:  Hai-Yan Wang; Yang Li; Li-Xia Qin; Arnon Heyman; Oded Shoseyov; Itamar Willner; Yi-Tao Long; He Tian
Journal:  Chem Commun (Camb)       Date:  2013-02-28       Impact factor: 6.222

5.  An intermediate in the assembly of a pore-forming protein trapped with a genetically-engineered switch.

Authors:  B Walker; O Braha; S Cheley; H Bayley
Journal:  Chem Biol       Date:  1995-02

6.  Molecular bases of cyclodextrin adapter interactions with engineered protein nanopores.

Authors:  Arijit Banerjee; Ellina Mikhailova; Stephen Cheley; Li-Qun Gu; Michelle Montoya; Yasuo Nagaoka; Eric Gouaux; Hagan Bayley
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-16       Impact factor: 11.205

Review 7.  Lipid-protein interactions in biological membranes: a structural perspective.

Authors:  A G Lee
Journal:  Biochim Biophys Acta       Date:  2003-05-02

8.  Kinetics, statistics, and energetics of lipid membrane electroporation studied by molecular dynamics simulations.

Authors:  Rainer A Böckmann; Bert L de Groot; Sergej Kakorin; Eberhard Neumann; Helmut Grubmüller
Journal:  Biophys J       Date:  2008-05-09       Impact factor: 4.033

9.  Lipid dependence of the channel properties of a colicin E1-lipid toroidal pore.

Authors:  Alexander A Sobko; Elena A Kotova; Yuri N Antonenko; Stanislav D Zakharov; William A Cramer
Journal:  J Biol Chem       Date:  2006-03-23       Impact factor: 5.157

10.  Rapid assembly of a multimeric membrane protein pore.

Authors:  James R Thompson; Bríd Cronin; Hagan Bayley; Mark I Wallace
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

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  26 in total

Review 1.  Pore-forming toxins: ancient, but never really out of fashion.

Authors:  Matteo Dal Peraro; F Gisou van der Goot
Journal:  Nat Rev Microbiol       Date:  2015-12-07       Impact factor: 60.633

Review 2.  Mechanistic Aspects of Folded Protein Transport by the Twin Arginine Translocase (Tat).

Authors:  Kenneth Cline
Journal:  J Biol Chem       Date:  2015-05-14       Impact factor: 5.157

3.  Electroporation of DC-3F cells is a dual process.

Authors:  Lars H Wegner; Wolfgang Frey; Aude Silve
Journal:  Biophys J       Date:  2015-04-07       Impact factor: 4.033

Review 4.  Building membrane nanopores.

Authors:  Stefan Howorka
Journal:  Nat Nanotechnol       Date:  2017-07-06       Impact factor: 39.213

5.  A monodisperse transmembrane α-helical peptide barrel.

Authors:  Kozhinjampara R Mahendran; Ai Niitsu; Lingbing Kong; Andrew R Thomson; Richard B Sessions; Derek N Woolfson; Hagan Bayley
Journal:  Nat Chem       Date:  2016-11-14       Impact factor: 24.427

6.  Electropore Formation in Mechanically Constrained Phospholipid Bilayers.

Authors:  M Laura Fernández; Marcelo Raúl Risk; P Thomas Vernier
Journal:  J Membr Biol       Date:  2017-11-23       Impact factor: 1.843

7.  Perforin oligomers form arcs in cellular membranes: a locus for intracellular delivery of granzymes.

Authors:  S S Metkar; M Marchioretto; V Antonini; L Lunelli; B Wang; R J C Gilbert; G Anderluh; R Roth; M Pooga; J Pardo; J E Heuser; M D Serra; C J Froelich
Journal:  Cell Death Differ       Date:  2014-08-22       Impact factor: 15.828

Review 8.  Outer membrane protein design.

Authors:  Joanna Sg Slusky
Journal:  Curr Opin Struct Biol       Date:  2016-11-26       Impact factor: 6.809

9.  The Role of Lipid Interactions in Simulations of the α-Hemolysin Ion-Channel-Forming Toxin.

Authors:  Nicholas B Guros; Arvind Balijepalli; Jeffery B Klauda
Journal:  Biophys J       Date:  2018-09-18       Impact factor: 4.033

Review 10.  Engineered transmembrane pores.

Authors:  Mariam Ayub; Hagan Bayley
Journal:  Curr Opin Chem Biol       Date:  2016-09-20       Impact factor: 8.822

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