Literature DB >> 24463506

Sulphoglycolysis in Escherichia coli K-12 closes a gap in the biogeochemical sulphur cycle.

Karin Denger1, Michael Weiss2, Ann-Katrin Felux2, Alexander Schneider3, Christoph Mayer3, Dieter Spiteller1, Thomas Huhn4, Alasdair M Cook1, David Schleheck1.   

Abstract

Sulphoquinovose (SQ, 6-deoxy-6-sulphoglucose) has been known for 50 years as the polar headgroup of the plant sulpholipid in the photosynthetic membranes of all higher plants, mosses, ferns, algae and most photosynthetic bacteria. It is also found in some non-photosynthetic bacteria, and SQ is part of the surface layer of some Archaea. The estimated annual production of SQ is 10,000,000,000 tonnes (10 petagrams), thus it comprises a major portion of the organo-sulphur in nature, where SQ is degraded by bacteria. However, despite evidence for at least three different degradative pathways in bacteria, no enzymic reaction or gene in any pathway has been defined, although a sulphoglycolytic pathway has been proposed. Here we show that Escherichia coli K-12, the most widely studied prokaryotic model organism, performs sulphoglycolysis, in addition to standard glycolysis. SQ is catabolised through four newly discovered reactions that we established using purified, heterologously expressed enzymes: SQ isomerase, 6-deoxy-6-sulphofructose (SF) kinase, 6-deoxy-6-sulphofructose-1-phosphate (SFP) aldolase, and 3-sulpholactaldehyde (SLA) reductase. The enzymes are encoded in a ten-gene cluster, which probably also encodes regulation, transport and degradation of the whole sulpholipid; the gene cluster is present in almost all (>91%) available E. coli genomes, and is widespread in Enterobacteriaceae. The pathway yields dihydroxyacetone phosphate (DHAP), which powers energy conservation and growth of E. coli, and the sulphonate product 2,3-dihydroxypropane-1-sulphonate (DHPS), which is excreted. DHPS is mineralized by other bacteria, thus closing the sulphur cycle within a bacterial community.

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Year:  2014        PMID: 24463506     DOI: 10.1038/nature12947

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  23 in total

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Authors:  Alasdair M Cook; Karin Denger
Journal:  Arch Microbiol       Date:  2002-11-07       Impact factor: 2.552

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  Sulfoquinovose degraded by pure cultures of bacteria with release of C3-organosulfonates: complete degradation in two-member communities.

Authors:  Karin Denger; Thomas Huhn; Klaus Hollemeyer; David Schleheck; Alasdair M Cook
Journal:  FEMS Microbiol Lett       Date:  2012-01-11       Impact factor: 2.742

5.  Questions remaining in sulfolipid biosynthesis: a historical perspective.

Authors:  Christoph Benning
Journal:  Photosynth Res       Date:  2007-03-02       Impact factor: 3.573

6.  Identification of coenzyme M biosynthetic phosphosulfolactate synthase: a new family of sulfonate-biosynthesizing enzymes.

Authors:  David E Graham; Huimin Xu; Robert H White
Journal:  J Biol Chem       Date:  2002-02-05       Impact factor: 5.157

7.  Two enzymes of a complete degradation pathway for linear alkylbenzenesulfonate (LAS) surfactants: 4-sulfoacetophenone Baeyer-Villiger monooxygenase and 4-sulfophenylacetate esterase in Comamonas testosteroni KF-1.

Authors:  Michael Weiss; Karin Denger; Thomas Huhn; David Schleheck
Journal:  Appl Environ Microbiol       Date:  2012-09-21       Impact factor: 4.792

8.  Homotaurine metabolized to 3-sulfopropanoate in Cupriavidus necator H16: enzymes and genes in a patchwork pathway.

Authors:  Jutta Mayer; Alasdair M Cook
Journal:  J Bacteriol       Date:  2009-07-31       Impact factor: 3.490

9.  Glycolytic breakdown of sulfoquinovose in bacteria: a missing link in the sulfur cycle.

Authors:  Alexander B Roy; Michael J E Hewlins; Andrew J Ellis; John L Harwood; Graham F White
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

10.  A proteomic view at the biochemistry of syntrophic butyrate oxidation in Syntrophomonas wolfei.

Authors:  Alexander Schmidt; Nicolai Müller; Bernhard Schink; David Schleheck
Journal:  PLoS One       Date:  2013-02-26       Impact factor: 3.240

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Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

2.  A Sulfoglycolytic Entner-Doudoroff Pathway in Rhizobium leguminosarum bv. trifolii SRDI565.

Authors:  Jinling Li; Ruwan Epa; Nichollas E Scott; Dominik Skoneczny; Mahima Sharma; Alexander J D Snow; James P Lingford; Ethan D Goddard-Borger; Gideon J Davies; Malcolm J McConville; Spencer J Williams
Journal:  Appl Environ Microbiol       Date:  2020-07-20       Impact factor: 4.792

3.  YihQ is a sulfoquinovosidase that cleaves sulfoquinovosyl diacylglyceride sulfolipids.

Authors:  Gaetano Speciale; Yi Jin; Gideon J Davies; Spencer J Williams; Ethan D Goddard-Borger
Journal:  Nat Chem Biol       Date:  2016-02-15       Impact factor: 15.040

4.  Elucidation of the trigonelline degradation pathway reveals previously undescribed enzymes and metabolites.

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Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-23       Impact factor: 11.205

5.  Two radical-dependent mechanisms for anaerobic degradation of the globally abundant organosulfur compound dihydroxypropanesulfonate.

Authors:  Jiayi Liu; Yifeng Wei; Lianyun Lin; Lin Teng; Jinyu Yin; Qiang Lu; Jiawei Chen; Yuchun Zheng; Yaxin Li; Runyao Xu; Weixiang Zhai; Yangping Liu; Yanhong Liu; Peng Cao; Ee Lui Ang; Huimin Zhao; Zhiguang Yuchi; Yan Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-22       Impact factor: 11.205

6.  Cryptic carbon and sulfur cycling between surface ocean plankton.

Authors:  Bryndan P Durham; Shalabh Sharma; Haiwei Luo; Christa B Smith; Shady A Amin; Sara J Bender; Stephen P Dearth; Benjamin A S Van Mooy; Shawn R Campagna; Elizabeth B Kujawinski; E Virginia Armbrust; Mary Ann Moran
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-29       Impact factor: 11.205

7.  Entner-Doudoroff pathway for sulfoquinovose degradation in Pseudomonas putida SQ1.

Authors:  Ann-Katrin Felux; Dieter Spiteller; Janosch Klebensberger; David Schleheck
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

8.  Novel indole-mediated potassium ion import system confers a survival advantage to the Xanthomonadaceae family.

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9.  iML1515, a knowledgebase that computes Escherichia coli traits.

Authors:  Jonathan M Monk; Colton J Lloyd; Elizabeth Brunk; Nathan Mih; Anand Sastry; Zachary King; Rikiya Takeuchi; Wataru Nomura; Zhen Zhang; Hirotada Mori; Adam M Feist; Bernhard O Palsson
Journal:  Nat Biotechnol       Date:  2017-10-11       Impact factor: 54.908

10.  Single-Target Regulators Constitute the Minority Group of Transcription Factors in Escherichia coli K-12.

Authors:  Tomohiro Shimada; Hiroshi Ogasawara; Ikki Kobayashi; Naoki Kobayashi; Akira Ishihama
Journal:  Front Microbiol       Date:  2021-06-18       Impact factor: 5.640

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