Literature DB >> 26878550

YihQ is a sulfoquinovosidase that cleaves sulfoquinovosyl diacylglyceride sulfolipids.

Gaetano Speciale1,2, Yi Jin3, Gideon J Davies3, Spencer J Williams1,2, Ethan D Goddard-Borger4,5.   

Abstract

Sulfoquinovose is produced by photosynthetic organisms at a rate of 10(10) tons per annum and is degraded by bacteria as a source of carbon and sulfur. We have identified Escherichia coli YihQ as the first dedicated sulfoquinovosidase and the gateway enzyme to sulfoglycolytic pathways. Structural and mutagenesis studies unveiled the sequence signatures for binding the distinguishing sulfonate residue and revealed that sulfoquinovoside degradation is widespread across the tree of life.

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Year:  2016        PMID: 26878550     DOI: 10.1038/nchembio.2023

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  24 in total

1.  Carboxyl group of residue Asp647 as possible proton donor in catalytic reaction of alpha-glucosidase from Schizosaccharomyces pombe.

Authors:  M Okuyama; A Okuno; N Shimizu; H Mori; A Kimura; S Chiba
Journal:  Eur J Biochem       Date:  2001-04

2.  Sulfoquinovose degraded by pure cultures of bacteria with release of C3-organosulfonates: complete degradation in two-member communities.

Authors:  Karin Denger; Thomas Huhn; Klaus Hollemeyer; David Schleheck; Alasdair M Cook
Journal:  FEMS Microbiol Lett       Date:  2012-01-11       Impact factor: 2.742

3.  Entner-Doudoroff pathway for sulfoquinovose degradation in Pseudomonas putida SQ1.

Authors:  Ann-Katrin Felux; Dieter Spiteller; Janosch Klebensberger; David Schleheck
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

4.  Protein production by auto-induction in high density shaking cultures.

Authors:  F William Studier
Journal:  Protein Expr Purif       Date:  2005-05       Impact factor: 1.650

5.  Utilization of a chloroplast membrane sulfolipid as a major internal sulfur source for protein synthesis in the early phase of sulfur starvation in Chlamydomonas reinhardtii.

Authors:  Koichi Sugimoto; Norihiro Sato; Mikio Tsuzuki
Journal:  FEBS Lett       Date:  2007-08-28       Impact factor: 4.124

6.  Molecular basis for the recognition of long-chain substrates by plant α-glucosidases.

Authors:  Takayoshi Tagami; Keitaro Yamashita; Masayuki Okuyama; Haruhide Mori; Min Yao; Atsuo Kimura
Journal:  J Biol Chem       Date:  2013-05-16       Impact factor: 5.157

7.  Glycolytic breakdown of sulfoquinovose in bacteria: a missing link in the sulfur cycle.

Authors:  Alexander B Roy; Michael J E Hewlins; Andrew J Ellis; John L Harwood; Graham F White
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

8.  SULFOCARBOHYDRATE METABOLISM. I. BACTERIAL PRODUCTION AND UTILIZATION OF SULFOACETATE.

Authors:  H L MARTELLI; A A BENSON
Journal:  Biochim Biophys Acta       Date:  1964-10-09

9.  Presenting your structures: the CCP4mg molecular-graphics software.

Authors:  S McNicholas; E Potterton; K S Wilson; M E M Noble
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

Review 10.  Dissecting conformational contributions to glycosidase catalysis and inhibition.

Authors:  Gaetano Speciale; Andrew J Thompson; Gideon J Davies; Spencer J Williams
Journal:  Curr Opin Struct Biol       Date:  2014-07-10       Impact factor: 6.809

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  17 in total

1.  A Sulfoglycolytic Entner-Doudoroff Pathway in Rhizobium leguminosarum bv. trifolii SRDI565.

Authors:  Jinling Li; Ruwan Epa; Nichollas E Scott; Dominik Skoneczny; Mahima Sharma; Alexander J D Snow; James P Lingford; Ethan D Goddard-Borger; Gideon J Davies; Malcolm J McConville; Spencer J Williams
Journal:  Appl Environ Microbiol       Date:  2020-07-20       Impact factor: 4.792

2.  Operational Experience of an Open-Access, Subscription-Based Mass Spectrometry and Proteomics Facility.

Authors:  Nicholas A Williamson
Journal:  J Am Soc Mass Spectrom       Date:  2018-01-03       Impact factor: 3.109

Review 3.  Sulfur Cycling and the Intestinal Microbiome.

Authors:  Larry L Barton; Nathaniel L Ritz; Guy D Fauque; Henry C Lin
Journal:  Dig Dis Sci       Date:  2017-08-01       Impact factor: 3.199

4.  Structural basis of the strict specificity of a bacterial GH31 α-1,3-glucosidase for nigerooligosaccharides.

Authors:  Marina Ikegaya; Toshio Moriya; Naruhiko Adachi; Masato Kawasaki; Enoch Y Park; Takatsugu Miyazaki
Journal:  J Biol Chem       Date:  2022-03-12       Impact factor: 5.486

5.  Discovery and characterization of a sulfoquinovose mutarotase using kinetic analysis at equilibrium by exchange spectroscopy.

Authors:  Palika Abayakoon; James P Lingford; Yi Jin; Christopher Bengt; Gideon J Davies; Shenggen Yao; Ethan D Goddard-Borger; Spencer J Williams
Journal:  Biochem J       Date:  2018-04-16       Impact factor: 3.857

6.  Structural and Biochemical Insights into the Function and Evolution of Sulfoquinovosidases.

Authors:  Palika Abayakoon; Yi Jin; James P Lingford; Marija Petricevic; Alan John; Eileen Ryan; Janice Wai-Ying Mui; Douglas E V Pires; David B Ascher; Gideon J Davies; Ethan D Goddard-Borger; Spencer J Williams
Journal:  ACS Cent Sci       Date:  2018-09-05       Impact factor: 14.553

7.  Anaerobic Degradation of the Plant Sugar Sulfoquinovose Concomitant With H2S Production: Escherichia coli K-12 and Desulfovibrio sp. Strain DF1 as Co-culture Model.

Authors:  Anna Burrichter; Karin Denger; Paolo Franchini; Thomas Huhn; Nicolai Müller; Dieter Spiteller; David Schleheck
Journal:  Front Microbiol       Date:  2018-11-27       Impact factor: 5.640

8.  Crystal Structure of α-Xylosidase from Aspergillus niger in Complex with a Hydrolyzed Xyloglucan Product and New Insights in Accurately Predicting Substrate Specificities of GH31 Family Glycosidases.

Authors:  Hongnan Cao; Jonathan D Walton; Phillip Brumm; George N Phillips
Journal:  ACS Sustain Chem Eng       Date:  2020-01-23       Impact factor: 8.198

Review 9.  Microalgae with Immunomodulatory Activities.

Authors:  Gennaro Riccio; Chiara Lauritano
Journal:  Mar Drugs       Date:  2019-12-18       Impact factor: 5.118

10.  Monogalactosyldiacylglycerol and Sulfolipid Synthesis in Microalgae.

Authors:  Gennaro Riccio; Daniele De Luca; Chiara Lauritano
Journal:  Mar Drugs       Date:  2020-05-01       Impact factor: 5.118

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