Literature DB >> 24457134

A framework to facilitate consistent characterization of read across uncertainty.

Karen Blackburn1, Sharon B Stuard2.   

Abstract

A process for evaluating analogues for use in structure activity relationship (SAR) assessments was previously published (Wu et al., 2010) and tested using a series of case studies (Blackburn et al., 2011). SAR-based "read across" approaches continue to be broadly used to address toxicological data gaps. The potential additional uncertainty introduced into risk assessments as a result of application of read across approaches to fill data gaps has been widely discussed (OECD, 2007; ECETOC, 2012; Patlewicz et al., 2013), but to date a systematic framework to guide the characterization of uncertainty in read across assessments has not been proposed. The current manuscript presents both a systematic framework to describe potential areas of additional uncertainty that may arise in read across (evaluated based on the number and suitability of analogues contributing data, severity of the critical effect, and effects and potency concordance), as well as a questionnaire for evaluating and documenting consideration of these potential additional sources of uncertainty by risk assessors. Application of this framework represents a next step in standardizing the read across process, both by providing a means to transparently assign a level of uncertainty to a SAR-based read across assessment and by facilitating consistency in read across conclusions drawn by different risk assessors.
Copyright © 2014 Elsevier Inc. All rights reserved.

Keywords:  Chemical analogue identification; Chemical grouping; Read across; Risk assessment; Structural-similarity; Structure activity relationship (SAR); Uncertainty

Mesh:

Year:  2014        PMID: 24457134     DOI: 10.1016/j.yrtph.2014.01.004

Source DB:  PubMed          Journal:  Regul Toxicol Pharmacol        ISSN: 0273-2300            Impact factor:   3.271


  9 in total

1.  Predicting the future: opportunities and challenges for the chemical industry to apply 21st-century toxicity testing.

Authors:  Raja S Settivari; Nicholas Ball; Lynea Murphy; Reza Rasoulpour; Darrell R Boverhof; Edward W Carney
Journal:  J Am Assoc Lab Anim Sci       Date:  2015-03       Impact factor: 1.232

2.  Navigating through the minefield of read-across tools: A review of in silico tools for grouping.

Authors:  Patlewicz Grace; Helman George; Pradeep Prachi; Shah Imran
Journal:  Comput Toxicol       Date:  2017-08

3.  A systematic evaluation of analogs and automated read-across prediction of estrogenicity: A case study using hindered phenols.

Authors:  Prachi Pradeep; Kamel Mansouri; Grace Patlewicz; Richard Judson
Journal:  Comput Toxicol       Date:  2017-11-01

4.  Exploring current read-across applications and needs among selected U.S. Federal Agencies.

Authors:  Grace Patlewicz; Lucina E Lizarraga; Diego Rua; David G Allen; Amber B Daniel; Suzanne C Fitzpatrick; Natàlia Garcia-Reyero; John Gordon; Pertti Hakkinen; Angela S Howard; Agnes Karmaus; Joanna Matheson; Moiz Mumtaz; Andrea-Nicole Richarz; Patricia Ruiz; Louis Scarano; Takashi Yamada; Nicole Kleinstreuer
Journal:  Regul Toxicol Pharmacol       Date:  2019-05-10       Impact factor: 3.271

5.  In silico toxicology protocols.

Authors:  Glenn J Myatt; Ernst Ahlberg; Yumi Akahori; David Allen; Alexander Amberg; Lennart T Anger; Aynur Aptula; Scott Auerbach; Lisa Beilke; Phillip Bellion; Romualdo Benigni; Joel Bercu; Ewan D Booth; Dave Bower; Alessandro Brigo; Natalie Burden; Zoryana Cammerer; Mark T D Cronin; Kevin P Cross; Laura Custer; Magdalena Dettwiler; Krista Dobo; Kevin A Ford; Marie C Fortin; Samantha E Gad-McDonald; Nichola Gellatly; Véronique Gervais; Kyle P Glover; Susanne Glowienke; Jacky Van Gompel; Steve Gutsell; Barry Hardy; James S Harvey; Jedd Hillegass; Masamitsu Honma; Jui-Hua Hsieh; Chia-Wen Hsu; Kathy Hughes; Candice Johnson; Robert Jolly; David Jones; Ray Kemper; Michelle O Kenyon; Marlene T Kim; Naomi L Kruhlak; Sunil A Kulkarni; Klaus Kümmerer; Penny Leavitt; Bernhard Majer; Scott Masten; Scott Miller; Janet Moser; Moiz Mumtaz; Wolfgang Muster; Louise Neilson; Tudor I Oprea; Grace Patlewicz; Alexandre Paulino; Elena Lo Piparo; Mark Powley; Donald P Quigley; M Vijayaraj Reddy; Andrea-Nicole Richarz; Patricia Ruiz; Benoit Schilter; Rositsa Serafimova; Wendy Simpson; Lidiya Stavitskaya; Reinhard Stidl; Diana Suarez-Rodriguez; David T Szabo; Andrew Teasdale; Alejandra Trejo-Martin; Jean-Pierre Valentin; Anna Vuorinen; Brian A Wall; Pete Watts; Angela T White; Joerg Wichard; Kristine L Witt; Adam Woolley; David Woolley; Craig Zwickl; Catrin Hasselgren
Journal:  Regul Toxicol Pharmacol       Date:  2018-04-17       Impact factor: 3.271

6.  Internationalization of read-across as a validated new approach method (NAM) for regulatory toxicology.

Authors:  Costanza Rovida; Tara Barton-Maclaren; Emilio Benfenati; Francesca Caloni; P. Charukeshi Chandrasekera; Christophe Chesné; Mark T D Cronin; Joop De Knecht; Daniel R Dietrich; Sylvia E Escher; Suzanne Fitzpatrick; Brenna Flannery; Matthias Herzler; Susanne Hougaard Bennekou; Bruno Hubesch; Hennicke Kamp; Jaffar Kisitu; Nicole Kleinstreuer; Simona Kovarich; Marcel Leist; Alexandra Maertens; Kerry Nugent; Giorgia Pallocca; Manuel Pastor; Grace Patlewicz; Manuela Pavan; Octavio Presgrave; Lena Smirnova; Michael Schwarz; Takashi Yamada; Thomas Hartung
Journal:  ALTEX       Date:  2020-04-30       Impact factor: 6.250

Review 7.  Chemical Safety Assessment Using Read-Across: Assessing the Use of Novel Testing Methods to Strengthen the Evidence Base for Decision Making.

Authors:  Elisabet Berggren; Patric Amcoff; Romualdo Benigni; Karen Blackburn; Edward Carney; Mark Cronin; Hubert Deluyker; Francoise Gautier; Richard S Judson; Georges E N Kass; Detlef Keller; Derek Knight; Werner Lilienblum; Catherine Mahony; Ivan Rusyn; Terry Schultz; Michael Schwarz; Gerrit Schüürmann; Andrew White; Julien Burton; Alfonso M Lostia; Sharon Munn; Andrew Worth
Journal:  Environ Health Perspect       Date:  2015-05-08       Impact factor: 9.031

8.  Toward Good Read-Across Practice (GRAP) guidance.

Authors:  Nicholas Ball; Mark T D Cronin; Jie Shen; Karen Blackburn; Ewan D Booth; Mounir Bouhifd; Elizabeth Donley; Laura Egnash; Charles Hastings; Daland R Juberg; Andre Kleensang; Nicole Kleinstreuer; E Dinant Kroese; Adam C Lee; Thomas Luechtefeld; Alexandra Maertens; Sue Marty; Jorge M Naciff; Jessica Palmer; David Pamies; Mike Penman; Andrea-Nicole Richarz; Daniel P Russo; Sharon B Stuard; Grace Patlewicz; Bennard van Ravenzwaay; Shengde Wu; Hao Zhu; Thomas Hartung
Journal:  ALTEX       Date:  2016-02-11       Impact factor: 6.043

9.  New Perspectives for Cancer Hazard Evaluation by the Report on Carcinogens: A Case Study Using Read-Across Methods in the Evaluation of Haloacetic Acids Found as Water Disinfection By-Products.

Authors:  Stanley T Atwood; Ruth M Lunn; Sanford C Garner; Gloria D Jahnke
Journal:  Environ Health Perspect       Date:  2019-12-19       Impact factor: 9.031

  9 in total

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