Literature DB >> 24454175

Imidazolium trans-di-aqua-dioxalato-chromate(III) dihydrate.

Ichraf Chérif1, Jawher Abdelhak1, Mohamed Faouzi Zid1, Ahmed Driss1.   

Abstract

In the title hydrated mol-ecular n class="Chemical">salt, (C3H5N2)[Cr(C2O4)2(H2O)2]·2H2O, the complete cation is generated by a crystallographic twofold rotation axis, with one C atom lying on the rotation axis. The complete anion is generated by crystallographic inversion symmetry (Cr(III) site symmetry -1), to generate a slightly distorted CrO6 octa-hedron with trans water mol-ecules and chelating oxalate dianions. The oxalate ion is almost planar (r.m.s. deviation = 0.017 Å) and the five-membered chelate ring is a shallow envelope with the metal ion displaced by 0.126 (1) Å from the ligand atoms. The crystal structure features O-H⋯O, N-H⋯O and C-H⋯O hydrogen bonds, which link the components into a three-dimensional network.

Entities:  

Year:  2013        PMID: 24454175      PMCID: PMC3885000          DOI: 10.1107/S160053681303078X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background to oxalate complexes, see: Chérif et al. (2012 ▶). For the structures of n class="Chemical">salts containing the [Cr(C2O4)2(H2O)2]− anion with various cations, see: Bélombé et al. (2009 ▶); Nenwa et al. (2010 ▶); Chérif et al. (2011 ▶); Kahlenberg et al. (2011 ▶). For geometric parameters of the imidazolium cation, see: Zhu (2012 ▶); Smith & Wermuth (2010 ▶).

Experimental

Crystal data

(C3H5N2)n class="Chemical">[Cr(C2O4)2(H2O)2]·2H2O M = 369.19 Monoclinic, a = 10.836 (1) Å b = 7.5409 (7) Å c = 16.349 (3) Å β = 93.52 (1)° V = 1333.4 (3) Å3 Z = 4 Mo Kα radiation μ = 0.93 mm−1 T = 298 K 0.6 × 0.4 × 0.3 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.647, T max = 0.757 1848 measured reflections 1452 independent reflections 1369 reflections with I > 2σ(I) R int = 0.011 2 standard reflections every 120 min intensity decay: 2.2%

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.086 S = 1.12 1452 reflections 124 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.55 e Å−3 Δρmin = −0.39 e Å−3 Data collection: CAD-4 EXPRESS (Duisenberg, 1992 ▶; Macíček & Yordanov, 1992 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 1999 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681303078X/hb7157sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681303078X/hb7157Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C3H5N2)[Cr(C2O4)2(H2O)2]·2H2OF(000) = 756
Mr = 369.19Dx = 1.839 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 25 reflections
a = 10.836 (1) Åθ = 10–15°
b = 7.5409 (7) ŵ = 0.93 mm1
c = 16.349 (3) ÅT = 298 K
β = 93.52 (1)°Prism, violet
V = 1333.4 (3) Å30.6 × 0.4 × 0.3 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1369 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.011
Graphite monochromatorθmax = 27.0°, θmin = 2.5°
ω/2θ scansh = −13→13
Absorption correction: ψ scan (North et al., 1968)k = −1→9
Tmin = 0.647, Tmax = 0.757l = −20→1
1848 measured reflections2 standard reflections every 120 min
1452 independent reflections intensity decay: 2.2%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.0456P)2 + 1.7165P] where P = (Fo2 + 2Fc2)/3
1452 reflections(Δ/σ)max < 0.001
124 parametersΔρmax = 0.55 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cr0.75000.25000.50000.02258 (15)
O20.70111 (13)0.12749 (18)0.39687 (8)0.0324 (3)
O30.83676 (12)0.02646 (17)0.52566 (8)0.0276 (3)
O40.73747 (15)−0.12361 (19)0.33002 (9)0.0387 (4)
O60.86780 (17)0.5293 (2)0.31972 (10)0.0402 (4)
C10.83297 (15)−0.0860 (2)0.46642 (11)0.0242 (4)
O10.59861 (14)0.1644 (2)0.54913 (11)0.0424 (4)
O50.88681 (13)−0.22844 (18)0.46604 (9)0.0334 (3)
C20.75010 (16)−0.0264 (2)0.38993 (11)0.0264 (4)
C30.9690 (2)0.1333 (3)0.71415 (13)0.0372 (5)
H70.94250.23370.68510.045*
N10.95088 (19)−0.0291 (4)0.69055 (13)0.0575 (6)
C41.0000−0.1396 (5)0.75000.0518 (9)
H10.832 (3)0.618 (4)0.3298 (18)0.051 (8)*
H20.535 (3)0.199 (4)0.5285 (19)0.055 (8)*
H30.606 (3)0.101 (4)0.592 (2)0.056 (8)*
H40.837 (3)0.493 (5)0.283 (2)0.072 (12)*
H50.910 (4)−0.078 (5)0.636 (2)0.085 (11)*
H61.0000−0.257 (7)0.75000.087 (18)*
U11U22U33U12U13U23
Cr0.0263 (2)0.0204 (2)0.0200 (2)0.00213 (14)−0.00693 (15)0.00055 (13)
O20.0411 (7)0.0286 (7)0.0257 (6)0.0078 (6)−0.0137 (5)−0.0039 (5)
O30.0326 (7)0.0246 (6)0.0242 (6)0.0035 (5)−0.0095 (5)0.0005 (5)
O40.0485 (8)0.0352 (8)0.0306 (7)0.0058 (6)−0.0109 (6)−0.0097 (6)
O60.0554 (10)0.0333 (8)0.0311 (8)0.0038 (7)−0.0030 (7)−0.0006 (6)
C10.0222 (8)0.0235 (8)0.0262 (8)−0.0013 (6)−0.0029 (6)0.0014 (7)
O10.0296 (8)0.0528 (10)0.0441 (9)0.0015 (7)−0.0030 (7)0.0219 (8)
O50.0326 (7)0.0260 (7)0.0408 (8)0.0062 (5)−0.0053 (6)−0.0010 (6)
C20.0277 (8)0.0267 (9)0.0242 (8)−0.0009 (7)−0.0045 (7)−0.0010 (7)
C30.0401 (11)0.0382 (11)0.0335 (10)0.0124 (9)0.0040 (8)0.0118 (9)
N10.0402 (10)0.0946 (19)0.0362 (10)0.0027 (11)−0.0099 (8)−0.0193 (11)
C40.0457 (18)0.0294 (16)0.080 (3)0.0000.0024 (17)0.000
Cr—O3i1.963 (1)C1—O51.223 (2)
Cr—O31.963 (1)C1—C21.560 (2)
Cr—O21.967 (1)O1—H20.79 (4)
Cr—O2i1.967 (1)O1—H30.85 (3)
Cr—O1i1.979 (2)C3—N11.295 (3)
Cr—O11.979 (2)C3—C3ii1.315 (4)
O2—C21.284 (2)C3—H70.9300
O3—C11.286 (2)N1—C41.363 (3)
O4—C21.224 (2)N1—H51.04 (4)
O6—H10.80 (3)C4—N1ii1.363 (3)
O6—H40.73 (4)C4—H60.89 (5)
O3i—Cr—O3180.0O5—C1—O3126.15 (16)
O3i—Cr—O296.89 (5)O5—C1—C2120.02 (16)
O3—Cr—O283.11 (5)O3—C1—C2113.83 (14)
O3i—Cr—O2i83.11 (5)Cr—O1—H2116 (2)
O3—Cr—O2i96.89 (5)Cr—O1—H3119 (2)
O2—Cr—O2i180.0H2—O1—H3125 (3)
O3i—Cr—O1i91.78 (7)O4—C2—O2125.83 (17)
O3—Cr—O1i88.22 (7)O4—C2—C1119.95 (16)
O2—Cr—O1i89.52 (7)O2—C2—C1114.21 (15)
O2i—Cr—O1i90.48 (7)N1—C3—C3ii108.99 (13)
O3i—Cr—O188.22 (7)N1—C3—H7125.5
O3—Cr—O191.78 (7)C3ii—C3—H7125.5
O2—Cr—O190.48 (7)C3—N1—C4108.7 (2)
O2i—Cr—O189.52 (7)C3—N1—H5130 (2)
O1i—Cr—O1180.0C4—N1—H5122 (2)
C2—O2—Cr114.16 (11)N1ii—C4—N1104.7 (3)
C1—O3—Cr114.36 (11)N1ii—C4—H6127.67 (16)
H1—O6—H4107 (3)N1—C4—H6127.67 (15)
D—H···AD—HH···AD···AD—H···A
O6—H1···O4iii0.80 (3)2.20 (3)2.984 (2)168 (3)
O6—H4···O4iv0.72 (3)2.16 (3)2.878 (2)174 (4)
O1—H2···O5v0.79 (3)1.93 (3)2.717 (2)173 (3)
O1—H3···O6i0.85 (3)1.75 (3)2.601 (2)176 (3)
N1—H5···O31.04 (4)2.07 (3)2.926 (2)137 (2)
C3—H7···O2i0.932.253.088 (3)150
Table 1

Selected bond lengths (Å)

Cr—O31.963 (1)
Cr—O21.967 (1)
Cr—O11.979 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O6—H1⋯O4i 0.80 (3)2.20 (3)2.984 (2)168 (3)
O6—H4⋯O4ii 0.72 (3)2.16 (3)2.878 (2)174 (4)
O1—H2⋯O5iii 0.79 (3)1.93 (3)2.717 (2)173 (3)
O1—H3⋯O6iv 0.85 (3)1.75 (3)2.601 (2)176 (3)
N1—H5⋯O31.04 (4)2.07 (3)2.926 (2)137 (2)
C3—H7⋯O2iv 0.932.253.088 (3)150

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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