Literature DB >> 21588731

Bis(imidazolium) galacta-rate dihydrate.

Graham Smith1, Urs D Wermuth.   

Abstract

In the structure of the title salt, 2C(3)H(5)N(2) (+)·C(6)H(8)O(8) (2-)·2H(2)O, the galacta-rate dianions have crystallographic inversion symmetry and together with the water mol-ecules of solvation form hydrogen-bonded sheet substructures which extend along (110). The imidazolium cations link these sheets peripherally down c through carboxyl-ate O-H-N and N'-H⋯O(hy-droxy) bridges, giving a three-dimensional framework structure.

Entities:  

Year:  2010        PMID: 21588731      PMCID: PMC3008094          DOI: 10.1107/S1600536810033532

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For mention of mucic acid in the Merck Index, see: O’Neil (2001 ▶). For the structures of imidazolium hydrogen salts of aliphatic dicarb­oxy­lic acids, see: James & Matsushima (1976 ▶); MacDonald et al. (2001 ▶); Aakeröy & Hitchcock (1993 ▶); Fuller et al. (1995 ▶); Fukunaga & Ishida (2003 ▶); Trivedi et al. (2003 ▶). For the structures of galacta­ric acid, ammonium H galacta­rate, diammonium galacta­rate and copper(II) galacta­rate dihydrate, see: Jeffrey & Wood (1982 ▶), Bontchev & Moore (2005 ▶), Benetollo et al. (1993 ▶) and Ferrier et al. (1998 ▶) respectively. For graph-set analysis, see: Etter et al. (1990 ▶).

Experimental

Crystal data

2C3H5N2 +·C6H8O8 2−·2H2O M = 382.34 Triclinic, a = 6.9184 (4) Å b = 7.1336 (4) Å c = 9.3652 (5) Å α = 92.000 (5)° β = 100.559 (5)° γ = 109.835 (6)° V = 425.06 (5) Å3 Z = 1 Mo Kα radiation μ = 0.13 mm−1 T = 200 K 0.45 × 0.45 × 0.30 mm

Data collection

Oxford Diffraction Gemini-S CCD-detector diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.965, T max = 0.980 4949 measured reflections 1657 independent reflections 1431 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.082 S = 1.13 1657 reflections 142 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) within WinGX (Farrugia, 1999 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810033532/ng5021sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810033532/ng5021Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C3H5N2+·C6H8O82·2H2OZ = 1
Mr = 382.34F(000) = 202
Triclinic, P1Dx = 1.494 Mg m3
Hall symbol: -P 1Melting point: 435 K
a = 6.9184 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 7.1336 (4) ÅCell parameters from 3387 reflections
c = 9.3652 (5) Åθ = 3.5–28.7°
α = 92.000 (5)°µ = 0.13 mm1
β = 100.559 (5)°T = 200 K
γ = 109.835 (6)°Plate, colourless
V = 425.06 (5) Å30.45 × 0.45 × 0.30 mm
Oxford Diffraction Gemini-S CCD-detector diffractometer1657 independent reflections
Radiation source: Enhance (Mo) X-ray source1431 reflections with I > 2σ(I)
graphiteRint = 0.019
ω scansθmax = 26.0°, θmin = 3.5°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)h = −8→8
Tmin = 0.965, Tmax = 0.980k = −8→8
4949 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082H atoms treated by a mixture of independent and constrained refinement
S = 1.13w = 1/[σ2(Fo2) + (0.0444P)2 + 0.0516P] where P = (Fo2 + 2Fc2)/3
1657 reflections(Δ/σ)max = 0.001
142 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O110.18384 (15)−0.07229 (13)0.80626 (9)0.0234 (3)
O120.26773 (14)−0.02982 (13)1.04961 (9)0.0207 (3)
O210.19607 (14)0.29951 (14)0.78260 (9)0.0203 (3)
O310.62559 (14)0.35914 (13)0.90945 (10)0.0197 (3)
C10.23436 (18)0.03283 (17)0.92558 (13)0.0154 (3)
C20.25848 (18)0.25478 (17)0.92684 (12)0.0151 (3)
C30.48566 (18)0.38863 (17)0.99549 (13)0.0153 (3)
N110.34766 (19)0.22454 (18)0.54570 (12)0.0261 (4)
N310.35478 (19)0.13600 (18)0.32587 (12)0.0265 (4)
C210.2302 (2)0.1404 (2)0.41585 (14)0.0269 (4)
C410.5588 (2)0.2202 (2)0.40018 (15)0.0302 (5)
C510.5544 (2)0.2764 (2)0.53780 (15)0.0285 (4)
O1W−0.02769 (16)0.53271 (15)0.78655 (11)0.0244 (3)
H220.118 (3)0.373 (3)0.7852 (19)0.046 (5)*
H20.163800.280500.987800.0180*
H30.524500.352001.096100.0180*
H320.657 (3)0.260 (3)0.9315 (18)0.040 (5)*
H110.301 (3)0.245 (3)0.625 (2)0.048 (5)*
H210.081000.091500.391600.0320*
H310.318 (3)0.084 (3)0.233 (2)0.044 (5)*
H410.680700.236100.361800.0360*
H510.672400.340100.614800.0340*
H11W0.043 (3)0.660 (4)0.803 (2)0.057 (6)*
H12W−0.127 (4)0.500 (3)0.835 (2)0.059 (6)*
U11U22U33U12U13U23
O110.0320 (5)0.0168 (5)0.0185 (5)0.0058 (4)0.0047 (4)−0.0032 (4)
O120.0290 (5)0.0158 (5)0.0174 (4)0.0077 (4)0.0056 (4)0.0024 (3)
O210.0257 (5)0.0230 (5)0.0157 (5)0.0135 (4)0.0032 (4)0.0023 (4)
O310.0214 (5)0.0149 (5)0.0265 (5)0.0079 (4)0.0113 (4)0.0032 (4)
C10.0129 (6)0.0148 (6)0.0174 (6)0.0026 (5)0.0051 (4)0.0001 (5)
C20.0185 (6)0.0143 (6)0.0132 (6)0.0058 (5)0.0049 (5)0.0009 (5)
C30.0185 (6)0.0136 (6)0.0144 (6)0.0052 (5)0.0054 (5)0.0017 (5)
N110.0347 (7)0.0308 (7)0.0175 (6)0.0160 (5)0.0084 (5)0.0031 (5)
N310.0379 (7)0.0260 (6)0.0152 (6)0.0116 (5)0.0044 (5)0.0010 (5)
C210.0273 (7)0.0304 (8)0.0230 (7)0.0104 (6)0.0043 (6)0.0070 (6)
C410.0311 (8)0.0336 (8)0.0301 (8)0.0134 (6)0.0120 (6)0.0064 (6)
C510.0286 (7)0.0294 (8)0.0241 (7)0.0085 (6)0.0007 (6)0.0004 (6)
O1W0.0231 (5)0.0180 (5)0.0325 (6)0.0063 (4)0.0095 (4)−0.0005 (4)
O11—C11.2465 (15)N11—H110.89 (2)
O12—C11.2690 (15)N31—H310.890 (18)
O21—C21.4223 (14)C1—C21.5341 (16)
O31—C31.4293 (16)C2—C31.5375 (18)
O21—H220.87 (2)C3—C3i1.5303 (16)
O31—H320.83 (2)C2—H21.0000
O1W—H11W0.87 (3)C3—H31.0000
O1W—H12W0.86 (3)C41—C511.345 (2)
N11—C211.3249 (17)C21—H210.9500
N11—C511.367 (2)C41—H410.9500
N31—C211.3178 (19)C51—H510.9500
N31—C411.369 (2)
C2—O21—H22108.6 (11)O31—C3—C3i107.52 (10)
C3—O31—H32110.6 (13)O21—C2—H2108.00
H11W—O1W—H12W111 (2)C3—C2—H2108.00
C21—N11—C51108.65 (12)C1—C2—H2108.00
C21—N31—C41108.66 (11)O31—C3—H3109.00
C51—N11—H11125.3 (14)C2—C3—H3109.00
C21—N11—H11126.1 (14)C3i—C3—H3109.00
C41—N31—H31123.6 (14)N11—C21—N31108.63 (13)
C21—N31—H31127.7 (14)N31—C41—C51107.15 (13)
O12—C1—C2116.02 (10)N11—C51—C41106.92 (12)
O11—C1—O12124.82 (11)N31—C21—H21126.00
O11—C1—C2119.16 (10)N11—C21—H21126.00
O21—C2—C3111.32 (10)N31—C41—H41126.00
O21—C2—C1110.05 (9)C51—C41—H41126.00
C1—C2—C3110.45 (10)N11—C51—H51127.00
O31—C3—C2109.98 (9)C41—C51—H51127.00
C2—C3—C3i112.11 (10)
C21—N11—C51—C41−0.42 (16)C1—C2—C3—C3i−177.68 (10)
C51—N11—C21—N310.31 (16)C1—C2—C3—O3162.76 (12)
C21—N31—C41—C51−0.19 (16)O21—C2—C3—C3i59.76 (13)
C41—N31—C21—N11−0.08 (16)O31—C3—C3i—O31i179.98 (12)
O11—C1—C2—O215.67 (17)C2—C3—C3i—O31i59.01 (12)
O12—C1—C2—O21−174.06 (11)C2—C3—C3i—C2i−179.98 (12)
O12—C1—C2—C362.63 (14)O31—C3—C3i—C2i−59.01 (12)
O11—C1—C2—C3−117.63 (13)N31—C41—C51—N110.36 (16)
O21—C2—C3—O31−59.81 (13)
D—H···AD—HH···AD···AD—H···A
N11—H11···O210.89 (2)1.84 (2)2.7311 (15)175.9 (19)
N31—H31···O12ii0.890 (18)1.795 (19)2.6810 (14)174 (2)
O21—H22···O1W0.87 (2)1.76 (2)2.6324 (15)177 (2)
O31—H32···O12iii0.83 (2)1.89 (2)2.7104 (13)170.9 (16)
O1W—H11W···O11iv0.87 (3)1.82 (3)2.6799 (14)170.9 (18)
O1W—H12W···O31v0.86 (3)1.94 (3)2.7763 (15)164.4 (19)
C21—H21···O11vi0.952.323.0935 (17)138
C41—H41···O11vii0.952.423.2273 (18)142
C51—H51···O1Wviii0.952.343.2827 (18)173
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N11—H11⋯O210.89 (2)1.84 (2)2.7311 (15)175.9 (19)
N31—H31⋯O12i0.890 (18)1.795 (19)2.6810 (14)174 (2)
O21—H22⋯O1W0.87 (2)1.76 (2)2.6324 (15)177 (2)
O31—H32⋯O12ii0.83 (2)1.89 (2)2.7104 (13)170.9 (16)
O1W—H11W⋯O11iii0.87 (3)1.82 (3)2.6799 (14)170.9 (18)
O1W—H12W⋯O31iv0.86 (3)1.94 (3)2.7763 (15)164.4 (19)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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