Literature DB >> 24382699

The Cambridge Structural Database in retrospect and prospect.

Colin R Groom1, Frank H Allen.   

Abstract

The Cambridge Crystallographic Data Centre (CCDC) was established in 1965 to record numerical, chemical and bibliographic data relating to published organic and metal-organic crystal structures. The Cambridge Structural Database (CSD) now stores data for nearly 700,000 structures and is a comprehensive and fully retrospective historical archive of small-molecule crystallography. Nearly 40,000 new structures are added each year. As X-ray crystallography celebrates its centenary as a subject, and the CCDC approaches its own 50th year, this article traces the origins of the CCDC as a publicly funded organization and its onward development into a self-financing charitable institution. Principally, however, we describe the growth of the CSD and its extensive associated software system, and summarize its impact and value as a basis for research in structural chemistry, materials science and the life sciences, including drug discovery and drug development. Finally, the article considers the CCDC's funding model in relation to open access and open data paradigms.
Copyright © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  CCDC origins and development; crystal structure database; drug discovery; drug formulation; structure correlation

Year:  2014        PMID: 24382699     DOI: 10.1002/anie.201306438

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  376 in total

1.  Force Field Optimization Guided by Small Molecule Crystal Lattice Data Enables Consistent Sub-Angstrom Protein-Ligand Docking.

Authors:  Hahnbeom Park; Guangfeng Zhou; Minkyung Baek; David Baker; Frank DiMaio
Journal:  J Chem Theory Comput       Date:  2021-02-12       Impact factor: 6.006

Review 2.  Can data repositories help find effective treatments for complex diseases?

Authors:  Gregory K Farber
Journal:  Prog Neurobiol       Date:  2016-03-24       Impact factor: 11.685

3.  Crystal structures of ten enanti-opure Schiff bases bearing a naphthyl group.

Authors:  Guadalupe Hernández-Téllez; Gloria E Moreno; Sylvain Bernès; Angel Mendoza; Oscar Portillo; Pankaj Sharma; René Gutiérrez
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2016-03-31

4.  Visualization of Hyperconjugation and Subsequent Structural Distortions through 3D Printing of Crystal Structures.

Authors:  Farha J Mithila; Stephanie Oyola-Reynoso; Martin M Thuo; Manza Bj Atkinson
Journal:  Lett Org Chem       Date:  2016       Impact factor: 0.867

5.  Crystal structure of (2E)-1-(4-hy-droxy-1-methyl-2-oxo-1,2-di-hydro-quinolin-3-yl)-3-(4-hy-droxy-3-meth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Peter Mangwala Kimpende; Ngoc Thanh Nguyen; Minh Thao Nguyen; Quoc Trung Vu; Luc Van Meervelt
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-03-28

6.  Conformation analysis of a novel fluorinated chalcone.

Authors:  Paulo S Carvalho; Jean M F Custodio; Wesley F Vaz; Cassio C Cirilo; Amanda F Cidade; Gilberto L B Aquino; Dulcinea M B Campos; Pedro Cravo; Clarimar J Coelho; Solemar S Oliveira; Ademir J Camargo; Hamilton B Napolitano
Journal:  J Mol Model       Date:  2017-03-01       Impact factor: 1.810

7.  Dimethyl and diethyl esters of 5,6-bis-(pyridin-2-yl)pyrazine-2,3-di-carb-oxy-lic acid: a comparison.

Authors:  Montserrat Alfonso; Helen Stoeckli-Evans
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2016-01-27

8.  Synthesis and structural studies of two pyridine-armed reinforced cyclen chelators and their transition metal complexes.

Authors:  Kevin R Wilson; Desiray J Cannon-Smith; Benjamin P Burke; Orry C Birdsong; Stephen J Archibald; Timothy J Hubin
Journal:  Polyhedron       Date:  2016-08-16       Impact factor: 3.052

Review 9.  High throughput methods to measure the propensity of compounds to form intramolecular hydrogen bonding.

Authors:  Giulia Caron; Maura Vallaro; Giuseppe Ermondi
Journal:  Medchemcomm       Date:  2017-04-27       Impact factor: 3.597

10.  Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop.

Authors:  Paul D Adams; Kathleen Aertgeerts; Cary Bauer; Jeffrey A Bell; Helen M Berman; Talapady N Bhat; Jeff M Blaney; Evan Bolton; Gerard Bricogne; David Brown; Stephen K Burley; David A Case; Kirk L Clark; Tom Darden; Paul Emsley; Victoria A Feher; Zukang Feng; Colin R Groom; Seth F Harris; Jorg Hendle; Thomas Holder; Andrzej Joachimiak; Gerard J Kleywegt; Tobias Krojer; Joseph Marcotrigiano; Alan E Mark; John L Markley; Matthew Miller; Wladek Minor; Gaetano T Montelione; Garib Murshudov; Atsushi Nakagawa; Haruki Nakamura; Anthony Nicholls; Marc Nicklaus; Robert T Nolte; Anil K Padyana; Catherine E Peishoff; Susan Pieniazek; Randy J Read; Chenghua Shao; Steven Sheriff; Oliver Smart; Stephen Soisson; John Spurlino; Terry Stouch; Radka Svobodova; Wolfram Tempel; Thomas C Terwilliger; Dale Tronrud; Sameer Velankar; Suzanna C Ward; Gregory L Warren; John D Westbrook; Pamela Williams; Huanwang Yang; Jasmine Young
Journal:  Structure       Date:  2016-04-05       Impact factor: 5.006

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