Literature DB >> 28659727

Visualization of Hyperconjugation and Subsequent Structural Distortions through 3D Printing of Crystal Structures.

Farha J Mithila1, Stephanie Oyola-Reynoso2, Martin M Thuo1,2, Manza Bj Atkinson1.   

Abstract

BACKGROUND: Structural distortions due to hyperconjugation in organic molecules, like norbornenes, are well captured through X-ray crystallographic data, but are sometimes difficult to visualize especially for those applying chemical knowledge and are not chemists.
METHODS: Crystal structure from the Cambridge database were downloaded and converted to .stl format. The structures were then printed at the desired scale using a 3D printer.
RESULTS: Replicas of the crystal structures were accurately reproduced in scale and any resulting distortions were clearly visible from the macroscale models. Through space interactions or effect of through space hyperconjugation was illustrated through loss of symmetry or distortions thereof.
CONCLUSION: The norbornene structures exhibits distortion that cannot be observed through conventional ball and stick modelling kits. We show that 3D printed models derived from crystallographic data capture even subtle distortions in molecules. We translate such crystallographic data into scaled-up models through 3D printing.

Entities:  

Keywords:  3D printing; crystallography; hyperconjugation; modeling; norbornene; stereo-electronic

Year:  2016        PMID: 28659727      PMCID: PMC5484092          DOI: 10.2174/1570178613666160204010454

Source DB:  PubMed          Journal:  Lett Org Chem        ISSN: 1570-1786            Impact factor:   0.867


  4 in total

1.  Inductive and Resonance Effects of Substituents on pi-Face Selection.

Authors:  A S Cieplak
Journal:  Chem Rev       Date:  1999-05-12       Impact factor: 60.622

2.  The norbornene mystery revealed.

Authors:  Stephan N Steinmann; Pierre Vogel; Yirong Mo; Clémence Corminboeuf
Journal:  Chem Commun (Camb)       Date:  2010-06-24       Impact factor: 6.222

3.  The Cambridge Structural Database in retrospect and prospect.

Authors:  Colin R Groom; Frank H Allen
Journal:  Angew Chem Int Ed Engl       Date:  2014-01-02       Impact factor: 15.336

4.  Alkene distortion energies and torsional effects control reactivities, and stereoselectivities of azide cycloadditions to norbornene and substituted norbornenes.

Authors:  Steven A Lopez; K N Houk
Journal:  J Org Chem       Date:  2012-07-13       Impact factor: 4.354

  4 in total
  1 in total

Review 1.  A 3D Printer in the Lab: Not Only a Toy.

Authors:  Vittorio Saggiomo
Journal:  Adv Sci (Weinh)       Date:  2022-07-13       Impact factor: 17.521

  1 in total

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