Literature DB >> 24369822

One-electron oxidation reactions of purine and pyrimidine bases in cellular DNA.

Jean Cadet1, J Richard Wagner, Vladimir Shafirovich, Nicholas E Geacintov.   

Abstract

PURPOSE: The aim of this survey is to critically review the available information on one-electron oxidation reactions of nucleobases in cellular DNA with emphasis on damage induced through the transient generation of purine and pyrimidine radical cations. Since the indirect effect of ionizing radiation mediated by hydroxyl radical is predominant in cells, efforts have been made to selectively ionize bases using suitable one-electron oxidants that consist among others of high intensity UVC laser pulses. Thus, the main oxidation product in cellular DNA was found to be 8-oxo-7,8-dihydroguanine as a result of direct bi-photonic ionization of guanine bases and indirect formation of guanine radical cations through hole transfer reactions from other base radical cations. The formation of 8-oxo-7,8-dihydroguanine and other purine and pyrimidine degradation products was rationalized in terms of the initial generation of related radical cations followed by either hydration or deprotonation reactions in agreement with mechanistic pathways inferred from detailed mechanistic studies. The guanine radical cation has been shown to be implicated in three other nucleophilic additions that give rise to DNA-protein and DNA-DNA cross-links in model systems. Evidence was recently provided for the occurrence of these three reactions in cellular DNA.
CONCLUSION: There is growing evidence that one-electron oxidation reactions of nucleobases whose mechanisms have been characterized in model studies involving aqueous solutions take place in a similar way in cells. It may also be pointed out that the above cross-linked lesions are only produced from the guanine radical cation and may be considered as diagnostic products of the direct effect of ionizing radiation.

Entities:  

Keywords:  DNA-protein cross-links; Ionizing radiation; intra and interstrand DNA cross-links; one-electron oxidation; oxidatively generated DNA damage

Mesh:

Substances:

Year:  2014        PMID: 24369822      PMCID: PMC4047668          DOI: 10.3109/09553002.2013.877176

Source DB:  PubMed          Journal:  Int J Radiat Biol        ISSN: 0955-3002            Impact factor:   2.694


  87 in total

1.  Generation of guanine-thymidine cross-links in DNA by peroxynitrite/carbon dioxide.

Authors:  Byeong Hwa Yun; Nicholas E Geacintov; Vladimir Shafirovich
Journal:  Chem Res Toxicol       Date:  2011-05-04       Impact factor: 3.739

2.  Prototropic equilibria in DNA containing one-electron oxidized GC: intra-duplex vs. duplex to solvent deprotonation.

Authors:  Amitava Adhikary; Anil Kumar; Shawn A Munafo; Deepti Khanduri; Michael D Sevilla
Journal:  Phys Chem Chem Phys       Date:  2010       Impact factor: 3.676

3.  DNA base damage in lymphocytes of cancer patients undergoing radiation therapy.

Authors:  R Olinski; T H Zastawny; M Foksinski; W Windorbska; P Jaruga; M Dizdaroglu
Journal:  Cancer Lett       Date:  1996-09-10       Impact factor: 8.679

4.  Identification of mammalian proteins cross-linked to DNA by ionizing radiation.

Authors:  Sharon Barker; Michael Weinfeld; Jing Zheng; Liang Li; David Murray
Journal:  J Biol Chem       Date:  2005-08-09       Impact factor: 5.157

Review 5.  Initial events in the cellular effects of ionizing radiations: clustered damage in DNA.

Authors:  D T Goodhead
Journal:  Int J Radiat Biol       Date:  1994-01       Impact factor: 2.694

6.  Detection of clustered DNA lesions: Biological and clinical applications.

Authors:  Alexandros Georgakilas
Journal:  World J Biol Chem       Date:  2011-07-26

7.  The SO4-.-induced oxidation of 2'-deoxyuridine-5'-phosphate, uridine-5'-phosphate and thymidine-5'-phosphate. An ESR study in aqueous solution.

Authors:  K Hildenbrand
Journal:  Z Naturforsch C J Biosci       Date:  1990 Jan-Feb

Review 8.  The carbonate radical and related oxidants derived from bicarbonate buffer.

Authors:  Danilo B Medinas; Giselle Cerchiaro; Daniel F Trindade; Ohara Augusto
Journal:  IUBMB Life       Date:  2007 Apr-May       Impact factor: 3.885

9.  Yields of damage to C4' deoxyribose and to pyrimidines in pUC18 by the direct effect of ionizing radiation.

Authors:  Anita R Peoples; Jane Lee; Michael Weinfeld; Jamie R Milligan; William A Bernhard
Journal:  Nucleic Acids Res       Date:  2012-03-29       Impact factor: 16.971

Review 10.  Induction and repair of clustered DNA lesions: what do we know so far?

Authors:  Alexandros G Georgakilas; Peter O'Neill; Robert D Stewart
Journal:  Radiat Res       Date:  2013-05-17       Impact factor: 2.841

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  38 in total

1.  pH-Dependent Equilibrium between 5-Guanidinohydantoin and Iminoallantoin Affects Nucleotide Insertion Opposite the DNA Lesion.

Authors:  Judy Zhu; Aaron M Fleming; Anita M Orendt; Cynthia J Burrows
Journal:  J Org Chem       Date:  2015-11-24       Impact factor: 4.354

2.  Iron Fenton oxidation of 2'-deoxyguanosine in physiological bicarbonate buffer yields products consistent with the reactive oxygen species carbonate radical anion not the hydroxyl radical.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  Chem Commun (Camb)       Date:  2020-08-25       Impact factor: 6.222

3.  UV-Induced Adenine Radicals Induced in DNA A-Tracts: Spectral and Dynamical Characterization.

Authors:  Akos Banyasz; Tiia-Maaria Ketola; Aurora Muñoz-Losa; Sunny Rishi; Amitava Adhikary; Michael D Sevilla; Lara Martinez-Fernandez; Roberto Improta; Dimitra Markovitsi
Journal:  J Phys Chem Lett       Date:  2016-09-22       Impact factor: 6.475

Review 4.  8-Oxo-7,8-dihydroguanine, friend and foe: Epigenetic-like regulator versus initiator of mutagenesis.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  DNA Repair (Amst)       Date:  2017-06-09

5.  Translesion synthesis past guanine(C8)-thymine(N3) intrastrand cross-links catalyzed by selected A- and Y-family polymerases.

Authors:  Young-Ae Lee; Yuan-Cho Lee; Nicholas E Geacintov; Vladimir Shafirovich
Journal:  Mol Biosyst       Date:  2016-05-24

6.  Reverse Transcription Past Products of Guanine Oxidation in RNA Leads to Insertion of A and C opposite 8-Oxo-7,8-dihydroguanine and A and G opposite 5-Guanidinohydantoin and Spiroiminodihydantoin Diastereomers.

Authors:  Anton Alenko; Aaron M Fleming; Cynthia J Burrows
Journal:  Biochemistry       Date:  2017-09-11       Impact factor: 3.162

7.  Human DNA Repair Genes Possess Potential G-Quadruplex Sequences in Their Promoters and 5'-Untranslated Regions.

Authors:  Aaron M Fleming; Judy Zhu; Yun Ding; Joshua A Visser; Julia Zhu; Cynthia J Burrows
Journal:  Biochemistry       Date:  2018-01-24       Impact factor: 3.162

8.  Interplay of Guanine Oxidation and G-Quadruplex Folding in Gene Promoters.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2020-01-09       Impact factor: 15.419

Review 9.  Formation and processing of DNA damage substrates for the hNEIL enzymes.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  Free Radic Biol Med       Date:  2016-11-20       Impact factor: 7.376

10.  Oxidative Modification of the Potential G-Quadruplex Sequence in the PCNA Gene Promoter Can Turn on Transcription.

Authors:  Samuel C J Redstone; Aaron M Fleming; Cynthia J Burrows
Journal:  Chem Res Toxicol       Date:  2019-01-14       Impact factor: 3.739

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