Literature DB >> 24358963

Distinct BimBH3 (BimSAHB) stapled peptides for structural and cellular studies.

Greg H Bird1, Evripidis Gavathiotis, James L LaBelle, Samuel G Katz, Loren D Walensky.   

Abstract

Hydrocarbon stapling is a chemical approach to restoring and fortifying the natural α-helical structure of peptides that otherwise unfold when taken out of context from the host protein. By iterating the peptide sequence, staple type, and sites of insertion, discrete compositions can be generated to suit a diversity of biochemical, structural, proteomic, cellular, and drug development applications. Here, we reinforce key design considerations to avoid pitfalls and maximize progress when applying stapled peptides in chemistry and biology research.

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Year:  2014        PMID: 24358963      PMCID: PMC4131438          DOI: 10.1021/cb4003305

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  21 in total

1.  Structure of Bax: coregulation of dimer formation and intracellular localization.

Authors:  M Suzuki; R J Youle; N Tjandra
Journal:  Cell       Date:  2000-11-10       Impact factor: 41.582

2.  Chemical synthesis of hydrocarbon-stapled peptides for protein interaction research and therapeutic targeting.

Authors:  Gregory H Bird; W Christian Crannell; Loren D Walensky
Journal:  Curr Protoc Chem Biol       Date:  2011-09-01

3.  A stapled BID BH3 helix directly binds and activates BAX.

Authors:  Loren D Walensky; Kenneth Pitter; Joel Morash; Kyoung Joon Oh; Scott Barbuto; Jill Fisher; Eric Smith; Gregory L Verdine; Stanley J Korsmeyer
Journal:  Mol Cell       Date:  2006-10-20       Impact factor: 17.970

4.  Apoptosis initiated when BH3 ligands engage multiple Bcl-2 homologs, not Bax or Bak.

Authors:  Simon N Willis; Jamie I Fletcher; Thomas Kaufmann; Mark F van Delft; Lin Chen; Peter E Czabotar; Helen Ierino; Erinna F Lee; W Douglas Fairlie; Philippe Bouillet; Andreas Strasser; Ruth M Kluck; Jerry M Adams; David C S Huang
Journal:  Science       Date:  2007-02-09       Impact factor: 47.728

5.  Reactivation of the p53 tumor suppressor pathway by a stapled p53 peptide.

Authors:  Federico Bernal; Andrew F Tyler; Stanley J Korsmeyer; Loren D Walensky; Gregory L Verdine
Journal:  J Am Chem Soc       Date:  2007-02-07       Impact factor: 15.419

6.  Stabilizing the pro-apoptotic BimBH3 helix (BimSAHB) does not necessarily enhance affinity or biological activity.

Authors:  Toru Okamoto; Kerry Zobel; Anna Fedorova; Clifford Quan; Hong Yang; Wayne J Fairbrother; David C S Huang; Brian J Smith; Kurt Deshayes; Peter E Czabotar
Journal:  ACS Chem Biol       Date:  2012-12-10       Impact factor: 5.100

7.  Direct and selective small-molecule activation of proapoptotic BAX.

Authors:  Evripidis Gavathiotis; Denis E Reyna; Joseph A Bellairs; Elizaveta S Leshchiner; Loren D Walensky
Journal:  Nat Chem Biol       Date:  2012-05-27       Impact factor: 15.040

8.  Direct activation of full-length proapoptotic BAK.

Authors:  Elizaveta S Leshchiner; Craig R Braun; Gregory H Bird; Loren D Walensky
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-12       Impact factor: 11.205

9.  Stepwise activation of BAX and BAK by tBID, BIM, and PUMA initiates mitochondrial apoptosis.

Authors:  Hyungjin Kim; Ho-Chou Tu; Decheng Ren; Osamu Takeuchi; John R Jeffers; Gerard P Zambetti; James J-D Hsieh; Emily H-Y Cheng
Journal:  Mol Cell       Date:  2009-11-13       Impact factor: 17.970

10.  The MCL-1 BH3 helix is an exclusive MCL-1 inhibitor and apoptosis sensitizer.

Authors:  Michelle L Stewart; Emiko Fire; Amy E Keating; Loren D Walensky
Journal:  Nat Chem Biol       Date:  2010-06-20       Impact factor: 15.040

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  35 in total

Review 1.  Targeting recognition surfaces on natural proteins with peptidic foldamers.

Authors:  James W Checco; Samuel H Gellman
Journal:  Curr Opin Struct Biol       Date:  2016-07-05       Impact factor: 6.809

2.  α/β-Peptide Foldamers Targeting Intracellular Protein-Protein Interactions with Activity in Living Cells.

Authors:  James W Checco; Erinna F Lee; Marco Evangelista; Nerida J Sleebs; Kelly Rogers; Anne Pettikiriarachchi; Nadia J Kershaw; Geoffrey A Eddinger; David G Belair; Julia L Wilson; Chelcie H Eller; Ronald T Raines; William L Murphy; Brian J Smith; Samuel H Gellman; W Douglas Fairlie
Journal:  J Am Chem Soc       Date:  2015-08-28       Impact factor: 15.419

Review 3.  Getting across the cell membrane: an overview for small molecules, peptides, and proteins.

Authors:  Nicole J Yang; Marlon J Hinner
Journal:  Methods Mol Biol       Date:  2015

Review 4.  An enhanced functional interrogation/manipulation of intracellular signaling pathways with the peptide 'stapling' technology.

Authors:  Y He; D Chen; W Zheng
Journal:  Oncogene       Date:  2015-03-23       Impact factor: 9.867

5.  Synthesis of cell-permeable stapled BH3 peptide-based Mcl-1 inhibitors containing simple aryl and vinylaryl cross-linkers.

Authors:  Avinash Muppidi; Kenichiro Doi; Carlo P Ramil; Hong-Gang Wang; Qing Lin
Journal:  Tetrahedron       Date:  2014-10-21       Impact factor: 2.457

6.  Iterative optimization yields Mcl-1-targeting stapled peptides with selective cytotoxicity to Mcl-1-dependent cancer cells.

Authors:  Raheleh Rezaei Araghi; Gregory H Bird; Jeremy A Ryan; Justin M Jenson; Marina Godes; Jonathan R Pritz; Robert A Grant; Anthony Letai; Loren D Walensky; Amy E Keating
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-16       Impact factor: 11.205

7.  Consideration of Binding Kinetics in the Design of Stapled Peptide Mimics of the Disordered Proteins Eukaryotic Translation Initiation Factor 4E-Binding Protein 1 and Eukaryotic Translation Initiation Factor 4G.

Authors:  Erin E Gallagher; James M Song; Arya Menon; Lauren D Mishra; Alyah F Chmiel; Amanda L Garner
Journal:  J Med Chem       Date:  2019-05-09       Impact factor: 7.446

8.  A two-component 'double-click' approach to peptide stapling.

Authors:  Yu Heng Lau; Yuteng Wu; Peterson de Andrade; Warren R J D Galloway; David R Spring
Journal:  Nat Protoc       Date:  2015-03-12       Impact factor: 13.491

9.  Cellular Uptake and Ultrastructural Localization Underlie the Pro-apoptotic Activity of a Hydrocarbon-stapled BIM BH3 Peptide.

Authors:  Amanda L Edwards; Franziska Wachter; Margaret Lammert; Annissa J Huhn; James Luccarelli; Gregory H Bird; Loren D Walensky
Journal:  ACS Chem Biol       Date:  2015-07-21       Impact factor: 5.100

Review 10.  Designing helical peptide inhibitors of protein-protein interactions.

Authors:  Raheleh Rezaei Araghi; Amy E Keating
Journal:  Curr Opin Struct Biol       Date:  2016-04-25       Impact factor: 6.809

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