Literature DB >> 31033289

Consideration of Binding Kinetics in the Design of Stapled Peptide Mimics of the Disordered Proteins Eukaryotic Translation Initiation Factor 4E-Binding Protein 1 and Eukaryotic Translation Initiation Factor 4G.

Erin E Gallagher1, James M Song2, Arya Menon1, Lauren D Mishra1, Alyah F Chmiel1, Amanda L Garner1,2.   

Abstract

Protein disorder plays a crucial role in signal transduction and is key for many cellular processes including transcription, translation, and cell cycle. Within the intrinsically disordered protein interactome, the α-helix is commonly used for binding, which is induced via a disorder-to-order transition. Because the targeting of protein-protein interactions (PPIs) remains an important challenge in medicinal chemistry, efforts have been made to mimic this secondary structure for rational inhibitor design through the use of stapled peptides. Cap-dependent mRNA translation is regulated by two disordered proteins, 4E-BP1 and eIF4G, that inhibit or stimulate the activity of the m7G cap-binding translation initiation factor, eIF4E, respectively. Both use an α-helical motif for eIF4E binding, warranting the investigation of stapled peptide mimics for manipulating eIF4E PPIs. Herein, we describe our efforts toward this goal, resulting in the synthesis of a cell-active stapled peptide for further development in manipulating aberrant cap-dependent translation in human diseases.

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Year:  2019        PMID: 31033289      PMCID: PMC6679956          DOI: 10.1021/acs.jmedchem.9b00068

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  88 in total

1.  Cap-dependent translation initiation in eukaryotes is regulated by a molecular mimic of eIF4G.

Authors:  J Marcotrigiano; A C Gingras; N Sonenberg; S K Burley
Journal:  Mol Cell       Date:  1999-06       Impact factor: 17.970

2.  A conserved HEAT domain within eIF4G directs assembly of the translation initiation machinery.

Authors:  J Marcotrigiano; I B Lomakin; N Sonenberg; T V Pestova; C U Hellen; S K Burley
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

3.  Speeding molecular recognition by using the folding funnel: the fly-casting mechanism.

Authors:  B A Shoemaker; J J Portman; P G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

4.  Preformed structural elements feature in partner recognition by intrinsically unstructured proteins.

Authors:  Monika Fuxreiter; István Simon; Peter Friedrich; Peter Tompa
Journal:  J Mol Biol       Date:  2004-05-14       Impact factor: 5.469

Review 5.  Regulation of cap-dependent translation by eIF4E inhibitory proteins.

Authors:  Joel D Richter; Nahum Sonenberg
Journal:  Nature       Date:  2005-02-03       Impact factor: 49.962

6.  Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(Kip1).

Authors:  Ewa A Bienkiewicz; Joshua N Adkins; Kevin J Lumb
Journal:  Biochemistry       Date:  2002-01-22       Impact factor: 3.162

7.  Single turn peptide alpha helices with exceptional stability in water.

Authors:  Nicholas E Shepherd; Huy N Hoang; Giovanni Abbenante; David P Fairlie
Journal:  J Am Chem Soc       Date:  2005-03-09       Impact factor: 15.419

8.  Activation of apoptosis in vivo by a hydrocarbon-stapled BH3 helix.

Authors:  Loren D Walensky; Andrew L Kung; Iris Escher; Thomas J Malia; Scott Barbuto; Renee D Wright; Gerhard Wagner; Gregory L Verdine; Stanley J Korsmeyer
Journal:  Science       Date:  2004-09-03       Impact factor: 47.728

9.  Activation of translation complex eIF4F is essential for the genesis and maintenance of the malignant phenotype in human mammary epithelial cells.

Authors:  Svetlana Avdulov; Shunan Li; Van Michalek; David Burrichter; Mark Peterson; David M Perlman; J Carlos Manivel; Nahum Sonenberg; Douglas Yee; Peter B Bitterman; Vitaly A Polunovsky
Journal:  Cancer Cell       Date:  2004-06       Impact factor: 31.743

10.  Determinants of rapamycin sensitivity in breast cancer cells.

Authors:  Woo-Chul Noh; Wallace H Mondesire; Junying Peng; Weiguo Jian; Haixia Zhang; JinJiang Dong; Gordon B Mills; Mien-Chie Hung; Funda Meric-Bernstam
Journal:  Clin Cancer Res       Date:  2004-02-01       Impact factor: 12.531

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  6 in total

Review 1.  Features of molecular recognition of intrinsically disordered proteins via coupled folding and binding.

Authors:  Jing Yang; Meng Gao; Junwen Xiong; Zhengding Su; Yongqi Huang
Journal:  Protein Sci       Date:  2019-09-04       Impact factor: 6.725

2.  The role of olefin geometry in the activity of hydrocarbon stapled peptides targeting eukaryotic translation initiation factor 4E (eIF4E).

Authors:  James M Song; Erin E Gallagher; Arya Menon; Lauren D Mishra; Amanda L Garner
Journal:  Org Biomol Chem       Date:  2019-06-19       Impact factor: 3.876

Review 3.  Targeting intracellular protein-protein interactions with macrocyclic peptides.

Authors:  Marina Buyanova; Dehua Pei
Journal:  Trends Pharmacol Sci       Date:  2021-12-13       Impact factor: 14.819

4.  A cell-penetrant lactam-stapled peptide for targeting eIF4E protein-protein interactions.

Authors:  Erin E Gallagher; Arya Menon; Alyah F Chmiel; Kirsten Deprey; Joshua A Kritzer; Amanda L Garner
Journal:  Eur J Med Chem       Date:  2020-07-25       Impact factor: 6.514

5.  Structural optimization of reversible dibromomaleimide peptide stapling.

Authors:  Ayanna Lindsey-Crosthwait; Diana Rodriguez-Lema; Martin Walko; Christopher M Pask; Andrew J Wilson
Journal:  Pept Sci (Hoboken)       Date:  2020-03-20

6.  Translation Initiation Factor eIF4E Positively Modulates Conidiogenesis, Appressorium Formation, Host Invasion and Stress Homeostasis in the Filamentous Fungi Magnaporthe oryzae.

Authors:  Wajjiha Batool; Ammarah Shabbir; Lili Lin; Xiaomin Chen; Qiuli An; Xiongjie He; Shu Pan; Shuzun Chen; Qinghe Chen; Zonghua Wang; Justice Norvienyeku
Journal:  Front Plant Sci       Date:  2021-06-16       Impact factor: 5.753

  6 in total

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