| Literature DB >> 24349494 |
Cheng Xue1, Wei Nie2, Dan Tang3, Lujiang Yi4, Changlin Mei1.
Abstract
OBJECTIVE: End-stage renal disease (ESRD) is a severe health concern over the world. Associations between apolipoprotein E (apoE) gene polymorphisms and the risk of ESRD remained inconclusive. This study aimed to investigate the association between apoE gene polymorphisms and ESRD susceptibility.Entities:
Mesh:
Substances:
Year: 2013 PMID: 24349494 PMCID: PMC3862680 DOI: 10.1371/journal.pone.0083367
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow chart of the study identification, inclusion, and exclusion.
Characteristics of included trials.
| Author /Year | Country | Ethnicity | Age group | Case (n) | Control (n) | Male/Female of ESRD (n) | Dialysis type | Genotyping method |
|---|---|---|---|---|---|---|---|---|
| Feussner/1992 | Germany | Caucasian | Adults | 560 | 1031 | NA | HD | PCR |
| Eggertsen/1997 | USA | Caucasian | Adults | 51 | 407 | 25/26 | CAPD | PCR |
| Olmer/1997 | France | Caucasian | Adults | 66 | 338 | 33/33 | HD | PCR |
| Fumitake/1997 | Japan | East Asians | Adults | 97 | 173 | 58/39 | HD | PCR |
| Kohlmeier/1998 | Germany | Caucasian | Adults | 219 | 1031 | NA | HD | PCR |
| Choi/1999 | Korea | East Asians | Adults | 54 | 194 | 27/27 | CAPD | PCR |
| Oda/1999 | Japan | East Asians | Adults | 485 | 576 | NA | CAPD+HD | PCR- RFLP |
| Imura/1999 | Japan | East Asians | Adults | 493 | 422 | 287/206 | HD | PCR |
| Guz/2000 | Turkey | Caucasian | Adults | 269 | 8366 | 154/115 | HD | PCR |
| Jana/2002 | Czech republic | Caucasian | Adults | 87 | 67 | 53/34 | HD | PCR- RFLP |
| Asakimori/2003 | Japan | East Asians | Adults | 163 | 576 | 85/78 | HD | PCR |
| Roussos/2004 | Sweden | Caucasian | Adults | 385 | 407 | 220/165 | CAPD+HD | PCR |
| Liberopoulos/2004 | Greece | Caucasian | Adults | 301 | 200 | 168/133 | HD | PCR |
| Huang/2005 | China | East Asians | Adults | 94 | 108 | 54/40 | CAPD+HD | PCR |
| Arikan/2007 | Turkey | Caucasian | Adults | 144 | 42 | 49/70 | CAPD+HD | PCR |
| Fahad/2008 | Saudi Arabia | Caucasian | Adults | 42 | 50 | NA | HD | PCR |
CAPD: continuous ambulatory peritoneal dialysis; HD: hemodialysis; PCR, polymerase chain reaction; RFLP, restriction fragment length polymorphism; NA, not available.
Distribution of apoE polymorphism among patients with ESRD and controls.
| Studies | ESRD | Control | Hardy–Weinberg equilibrium | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ε2ε2 | ε2ε3 | ε2ε4 | ε3ε3 | ε3ε4 | ε4ε4 | ε2ε2 | ε2ε3 | ε2ε4 | ε3ε3 | ε3ε4 | ε4ε4 | |||
| Feussner/1992 | 8 | 60 | 18 | 346 | 117 | 11 | 10 | 124 | 15 | 617 | 236 | 29 | Yes | |
| Olmer/1997 | 1 | 8 | 1 | 41 | 15 | 0 | 3 | 40 | 4 | 231 | 54 | 6 | Yes | |
| Fumitake/1997 | 0 | 10 | 2 | 66 | 19 | 1 | 0 | 15 | 0 | 131 | 24 | 3 | Yes | |
| Eggertsen/1997 | 0 | 2 | 3 | 30 | 14 | 2 | 4 | 42 | 14 | 239 | 65 | 43 | No | |
| Kohlmeier/1998 | 7 | 31 | 1 | 139 | 39 | 2 | 10 | 124 | 15 | 617 | 236 | 29 | Yes | |
| Oda/1999 | 1 | 50 | 4 | 347 | 82 | 1 | 2 | 35 | 4 | 414 | 111 | 10 | Yes | |
| Choi/1999 | 0 | 8 | 0 | 37 | 9 | 0 | 0 | 16 | 0 | 147 | 31 | 0 | Yes | |
| Imura/1999 | 0 | 53 | 0 | 350 | 90 | 0 | 0 | 41 | 0 | 316 | 65 | 0 | No | |
| Guz/2000 | 4 | 33 | 2 | 200 | 28 | 2 | 33 | 887 | 67 | 6208 | 1079 | 92 | No | |
| Jana/2002 | 1 | 9 | 3 | 63 | 11 | 0 | 0 | 9 | 1 | 44 | 12 | 1 | Yes | |
| Asakimori/2003 | 1 | 21 | 1 | 109 | 31 | 0 | 2 | 35 | 4 | 414 | 111 | 10 | Yes | |
| Roussos/2004 | 1 | 49 | 9 | 215 | 96 | 15 | 1 | 42 | 9 | 181 | 101 | 9 | Yes | |
| Liberopoulos /2004 | 5 | 28 | 3 | 224 | 40 | 1 | 0 | 21 | 2 | 128 | 44 | 5 | Yes | |
| Huang/2005 | 4 | 30 | 7 | 47 | 6 | 0 | 2 | 15 | 4 | 76 | 11 | 0 | Yes | |
| Arikan/2007 | 1 | 18 | 4 | 107 | 12 | 2 | 1 | 3 | 0 | 36 | 2 | 0 | Yes | |
| Fahad/2008 | 0 | 4 | 1 | 33 | 3 | 1 | 0 | 3 | 0 | 35 | 11 | 1 | Yes | |
Figure 2Meta-analysis for the association between the ε2 allele and ESRD risk.
Determination of the genetic effects of apoE polymorphisms on ESRD and subgroup analyses.
| Studies number | Heterogeneity ( | Model | OR (95 % CI) |
| |
|---|---|---|---|---|---|
| Genetic contrasts | |||||
| ε2ε2+ versus ε2ε2- | 16 | 0.78 | Fixed | 2.03 (1.27, 3.26) | 0.003 |
| ε2ε3+ versus ε2ε3- | 16 | 0.06 | Random | 1.25 (1.03, 1.51) | 0.02 |
| ε2ε4+ versus ε2ε4- | 16 | 0.88 | Fixed | 1.43 (0.99, 2.06) | 0.05 |
| ε3ε3+ versus ε3ε3- | 16 | 0.02 | Random | 0.96 (0.83, 1.10) | 0.56 |
| ε3ε4+ versus ε3ε4- | 16 | 0.05 | Random | 0.91 (0.78, 1.07) | 0.27 |
| ε4ε4+ versus ε4ε4- | 16 | 0.41 | Fixed | 0.55 (0.38, 0.81) | 0.002 |
| ε2+ versus ε2 - | 16 | 0.24 | Fixed | 1.30 (1.15, 1.46) | 0.0001 |
| ε3+ versus ε3- | 16 | 0.05 | Random | 0.97 (0.87, 1.08) | 0.57 |
| ε4+ versus ε4- | 16 | 0.06 | Random | 0.86 (0.75, 0.99) | 0.04 |
| East Asians | |||||
| ε2ε2+ versus ε2ε2- | 6 | 0.65 | Fixed | 1.52 (0.47, 4.90) | 0.48 |
| ε2ε3+ versus ε2ε3- | 6 | 0.18 | Fixed | 1.66 (1.31, 2.10) | 0.0001 |
| ε2ε4+ versus ε2ε4- | 6 | 0.76 | Fixed | 1.63 (0.73, 3.65) | 0.23 |
| ε3ε3+ versus ε3ε3- | 6 | 0.18 | Fixed | 0.81 (0.69, 0.94) | 0.007 |
| ε3ε4+ versus ε3ε4- | 6 | 0.45 | Fixed | 1.02 (0.84, 1.23) | 0.86 |
| ε4ε4+ versus ε4ε4- | 6 | 0.56 | Fixed | 0.19 (0.05, 0.73) | 0.01 |
| ε2+ versus ε2 - | 6 | 0.20 | Fixed | 1.62 (1.31, 2.01) | 0.0001 |
| ε3+ versus ε3- | 6 | 0.09 | Random | 0.81 (0.66, 1.00) | 0.05 |
| ε4+ versus ε4- | 6 | 0.26 | Fixed | 0.94 (0.79, 1.11) | 0.45 |
| Caucasians | |||||
| ε2ε2+ versus ε2ε2- | 10 | 0.64 | Fixed | 2.16 (1.29, 3.61) | 0.003 |
| ε2ε3+ versus ε2ε3- | 10 | 0.75 | Fixed | 1.01 (0.85, 1.20) | 0.90 |
| ε2ε4+ versus ε2ε4- | 10 | 0.72 | Fixed | 1.38 (0.92, 2.08) | 0.12 |
| ε3ε3+ versus ε3ε3- | 10 | 0.33 | Fixed | 1.11 (0.99, 1.24) | 0.09 |
| ε3ε4+ versus ε3ε4- | 10 | 0.04 | Random | 0.85 (0.68, 1.07) | 0.17 |
| ε4ε4+ versus ε4ε4- | 10 | 0.47 | Fixed | 0.64 (0.43, 0.96) | 0.03 |
| ε2+ versus ε2 - | 10 | 0.81 | Fixed | 1.17 (1.02, 1.36) | 0.03 |
| ε3+ versus ε3- | 10 | 0.43 | Fixed | 1.06 (0.96, 1.17) | 0.25 |
| ε4+ versus ε4- | 10 | 0.06 | Random | 0.81 (0.67, 0.98) | 0.03 |
Figure 3One-way sensitivity analysis for the ε2 allele and ESRD risk.
Figure 4Cumulative meta-analysis of associations between the ε2 allele and ESRD risk.
Sensitivity analysis of the association between apoE polymorphisms and ESRD.
| Sensitivity analysis | Studies number | Heterogeneity ( | Model | OR (95 % CI) |
|
|---|---|---|---|---|---|
| ε2ε2+ versus ε2ε2- | 13 | 0.79 | Fixed | 1.91 (1.13, 3.22) | 0.02 |
| ε2ε3+ versus ε2ε3- | 13 | 0.04 | Random | 1.32 (1.04, 1.66) | 0.02 |
| ε2ε4+ versus ε2ε4- | 13 | 0.81 | Fixed | 1.46 (0.98, 2.17) | 0.06 |
| ε3ε3+ versus ε3ε3- | 13 | 0.009 | Random | 0.96 (0.80, 1.14) | 0.64 |
| ε3ε4+ versus ε3ε4- | 13 | 0.21 | Fixed | 0.85 (0.74, 0.96) | 0.01 |
| ε4ε4+ versus ε4ε4- | 13 | 0.30 | Fixed | 0.57 (0.38, 0.86) | 0.007 |
| ε2+ versus ε2 - | 13 | 0.24 | Fixed | 1.34 (1.17, 1.54) | 0.0001 |
| ε3+ versus ε3- | 13 | 0.03 | Random | 0.96 (0.84, 1.11) | 0.61 |
| ε4+ versus ε4- | 13 | 0.08 | Random | 0.83 (0.71, 0.97) | 0.02 |
Figure 5Meta-analysis for the plasma apoE between ε2 carriers and (ε3 + ε4) carriers in the patients with ESRD.
Figure 6Funnel plot for the ε2 allele and ESRD risk.