| Literature DB >> 24346830 |
Frederico Somaio Neto1, Adauto Tsutomu Ikejiri1, Paulo Roberto Bertoletto1, José Carlos Bertoletto Chaves1, Roberto Teruya2, Djalma José Fagundes3, Murched Omar Taha3.
Abstract
BACKGROUND: Intestinal ischemia-reperfusion is a frequent clinical event associated to injury in distant organs, especially the heart.Entities:
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Year: 2013 PMID: 24346830 PMCID: PMC3987340 DOI: 10.5935/abc.20130240
Source DB: PubMed Journal: Arq Bras Cardiol ISSN: 0066-782X Impact factor: 2.000
Distribution of investigated genes according to family groups with similar functions and their respective identification acronyms in the gene bank.
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| 1 | Glutathione Peroxidases (GPX): | 10 | Gpx1, Gpx2, Gpx3, Gpx4, Gpx5, Gpx6, Gpx7, Gpx8, Gstk1, Gsr. |
| 2 | Peroxiredoxins (TPX): | 8 | Ehd2, Prdx1, Prdx2, Prdx3, Prdx4, Prdx5, Prdx6, Prdx1rs1. |
| 3 | Peroxidases | 16 | Aass, Apc, Cat, Ctsb, Duox1, Epx, Lpo, Mpo, Ptgs1, Ptgs2, Rag2, RGD1560658 (Serpinb1b), RGD1565187 (Kif9), Slc41a3, Tmod1, Tpo. |
| 4 | Reactive Oxygen Species | 16 | Ccs, Cyba, Fmo2, Il19, Il22, Ncf2, Nos2, Nox1, Nox4, Noxa1, Noxo1, Recql4, Scd1, Sod1, Sod2, Sod3. |
| 5 | Oxidative Stress | 22 | Als2, Apoe, Ercc2, Ercc6 Gab1, Idh1, Mpp4, Nqo1, Nudt15, Nxn, Park7, Ppp1r15b, Prnp, Psmb5, Srxn1, Txnip, Txnrd1, Txnrd2, Txnrd3, Ucp3, Xpa, Zmynd17. |
| 6 | Oxygen Carriers | 12 | Aqr, LOC367198 (Atr), Cygb, Dnm2, Fancc, Hbq1, Slb (Ift172), Mb, Ngb, Slc38a1, Vim , Xirp1. |
Chart 1Disposition of the expression of 84 genes in the cardiac tissue related to intestine ischemia and reperfusion in the animals of GC and GIR groups. The black line indicates normal expression; the pink lines indicate three times higher than the gene expression allowed by the algorithm.
Distribution of 28 genes out of the 84 genes investigated in the heart with positive expression (+) or negative expression (-) 2^(- Delta Delta Ct) in the animals subjected to a 60-minute ischemia in the small intestine followed by a 60-minute reperfusion in comparison to the control group that was not subjected to ischemia/reperfusion; (* = significant p-value < 0.05)
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| 1 | NM_013930 | Aass | Aminoadipate-semialdehyde synthase | +19.63* | 0.000001 | +6.65* | 0.01209 |
| 2 | NM_009696 | Apoe | Apolipoprotein E | +1.76* | 0.002533 | +3.60* | 0.01737 |
| 3 | NM_007985 | Fancc | Fanconi anemia. complementation group C | +7.42* | 0.000015 | +1.87* | 0.04313 |
| 4 | NM_018881 | Fmo2 | Flavin containing monooxygenase 2 | +1.52* | 0.019633 | +4.93* | 0.00772 |
| 5 | NM_010343 | Gpx5 | Glutathione peroxidase 5 | +5.10* | 0.001774 | +0.50* | 0.03717 |
| 6 | NM_027127 | Gpx8 | Glutathione peroxidase 8 (putative) | +1.43 | 0.072334 | +2.19* | 0.01271 |
| 7 | NM_010344 | Gsr | Glutathione reductase | +1.64 | 0.149896 | +2.34* | 0.02997 |
| 8 | NM_080420 | Lpo | Lactoperoxidase | +23.88* | 0.00002 | -2.28* | 0.00326 |
| 9 | NM_010877 | Ncf2 | Neutrophil cytosolic factor 2 | +4.31* | 0.000018 | +2.43* | 0.02876 |
| 10 | NM_010927 | Nos2 | Nitric oxide synthase 2. inducible | +4.71* | 0.000117 | +1.31* | 0.00129 |
| 11 | NM_015760 | Nox4 | NADPH oxidase 4 | +12.47* | 0.000005 | +5.73* | 0.02561 |
| 12 | NM_172204 | Noxa1 | NADPH oxidase activator 1 | +3.06* | 0.000083 | +1.49* | 0.00072 |
| 13 | NM_027988 | Noxo1 | NADPH oxidase organizer 1 | +1.33* | 0.000177 | +2.10* | 0.03623 |
| 14 | NM_008750 | Nxn | Nucleoredoxin | +1.98* | 0.002268 | +2.53* | 0.036 |
| 15 | NM_133819 | Ppp1r15b | Protein phosphatase 1. regulatory (inhibitor) subunit 15b | +1.06 | 0.962143 | +1.99* | 0.04908 |
| 16 | NM_012021 | Prdx5 | Peroxiredoxin 5 | -1.54* | 0.008534 | +2.14* | 0.01926 |
| 17 | NM_011186 | Psmb5 | Proteasome (prosome. macropain) subunit. beta type 5 | +1.21 | 0.078442 | +1.32* | 0.00488 |
| 18 | NM_008969 | Ptgs1 | Prostaglandin-endoperoxide synthase 1 | +1.56* | 0.012124 | +2.94* | 0.00004 |
| 19 | NM_011198 | Ptgs2 | Prostaglandin-endoperoxide synthase 2 | +10.07* | 0.000003 | +3.94* | 0.00691 |
| 20 | NM_009020 | Rag2 | Recombination activating gene 2 | +15.79* | 0.000293 | +3.42* | 0.04444 |
| 21 | NM_009127 | Scd1 | Stearoyl-Coenzyme A desaturase 1 | +6.85* | 0.00042 | +31.73* | 0.000099 |
| 22 | NM_134086 | Slc38a1 | Solute carrier family 38. member 1 | +4.59* | 0.000106 | +8.86* | 0.01516 |
| 23 | NM_013671 | Sod2 | Superoxide dismutase 2. mitochondrial | +1.47* | 0.009249 | -1.80* | 0.02156 |
| 24 | NM_011435 | Sod3 | Superoxide dismutase 3. extracellular | +2.51* | 0.002347 | +1.28* | 0.00081 |
| 25 | NM_021883 | Tmod1 | Tropomodulin 1 | +15.01* | 0.000161 | -1.05* | 0.00619 |
| 26 | NM_023719 | Txnip | Thioredoxin interacting protein | +1.87* | 0.00026 | +2.02* | 0.00127 |
| 27 | NM_009464 | Ucp3 | Uncoupling protein 3 (mitochondrial. proton carrier) | +15.85* | 0.000102 | +1.62* | 0.01441 |
| 28 | NM_011701 | Vim | Vimentin | +2.20* | 0.000155 | +2.59* | 0.01509 |
Distribution of 8 hyper-expressed genes 2^(- Delta Delta Ct) out of the 84 genes investigated in the heart compared to the genes expressed in the intestine of the animals subjected to a 60-minute ischemia in the small intestine followed by a 60-minute reperfusion in comparison to the control group that was not subjected to ischemia/reperfusion; (* = p-value < 0.05)
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| 1 | NM_013930 | Aass | Aminoadipate-semialdehyde synthase | +19.64 | 0.000001* | +6.65 | 0.012092* |
| 2 | NM_009696 | Apoe | Apolipoprotein E | +1.94 | 0.002533* | +3.6 | 0.017365* |
| 3 | NM_018881 | Fmo2 | Flavin containing monooxygenase 2 | +1.6 | 0.019633* | +4.93 | 0.007719* |
| 4 | NM_015760 | Nox4 | NADPH oxidase 4 | +3.13 | 0.000005* | +5.73 | 0.025614* |
| 5 | NM_011198 | Ptgs2 | Prostaglandin-endoperoxide synthase 2 | +14.6 | 0.000003* | +3.94 | 0.006908* |
| 6 | NM_009020 | Rag2 | Recombination activating gene 2 | +10.76 | 0.000293* | +3.42 | 0.044442* |
| 7 | NM_009127 | Scd1 | Stearoyl-Coenzyme A desaturase 1 | +1.62 | 0.000420* | +31.73 | 0.000099* |
| 8 | NM_134086 | Slc38a1 | Solute carrier family 38. member 1 | -1.29 | 0.000106* | +8.86 | 0.015159* |
Chart 2Eight genes related to oxidative stress and expressed three times above the threshold allowed by the algorithm in intestine and cardiac tissues.
Amount and percentage of genes hyper-expressed with statistically significant values and simultaneous occurrence in the intestine and heart tissues
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| Genes considered to be significant (p < 0.05) | 65 (74.71%) | 28 (33.33%) | 24 (28.57%) | ||
| Genes considered to be hyper-expressed | 37 (44.04%) | 8 (9.52%) | 4 (4.76%) | ||
Figure 1Photomicrography of the left ventricle of a mouse in the Control Group (GC). Please note large volume and euchromatic nuclei of cardiomyocytes centralized in the cell (yellow arrows). Preserved vessels with no red blood cell extravasation (blue arrows). Cardiac fibers correctly positioned. (HE 400x).
Figure 2Photomicrography of the left ventricle of a mouse in the Ischemia and Reperfusion Group (GIR). Please note smaller volume and pyknotic nuclei (yellow cell) of cardiomyocytes in the edge of the cell (white cell). Swollen cells and cardiac fibers in a disorganized direction. (HE 400x).