Phyllosticta is a geographically widespread genus of plant pathogenic fungi with a diverse host range. This study redefines Phyllosticta, and shows that it clusters sister to the Botryosphaeriaceae (Botryosphaeriales, Dothideomycetes), for which the older family name Phyllostictaceae is resurrected. In moving to a unit nomenclature for fungi, the generic name Phyllosticta was chosen over Guignardia in previous studies, an approach that we support here. We use a multigene DNA dataset of the ITS, LSU, ACT, TEF and GPDH gene regions to investigate 129 isolates of Phyllosticta, representing about 170 species names, many of which are shown to be synonyms of the ubiquitous endophyte P. capitalensis. Based on the data generated here, 12 new species are introduced, while epitype and neotype specimens are designated for a further seven species. One species of interest is P. citrimaxima associated with tan spot of Citrus maxima fruit in Thailand, which adds a fifth species to the citrus black spot complex. Previous morphological studies lumped many taxa under single names that represent complexes. In spite of this Phyllosticta is a species-rich genus, and many of these taxa need to be recollected in order to resolve their phylogeny and taxonomy. TAXONOMIC NOVELTIES: New species - Phyllosticta abieticola Wikee & Crous, P. aloeicola Wikee & Crous, P. citrimaxima Wikee, Crous, K.D. Hyde & McKenzie, P. leucothoicola Wikee, Motohashi & Crous, P. mangifera-indica Wikee, Crous, K.D. Hyde & McKenzie, P. neopyrolae Wikee, Motohashi, Crous, K.D. Hyde & McKenzie, P. pachysandricola Wikee, Motohashi & Crous, P. paxistimae Wikee & Crous, P. podocarpicola Wikee, Crous, K.D. Hyde & McKenzie, P. rhaphiolepidis Wikee, C. Nakash. & Crous, P. rubra Wikee & Crous, P. vacciniicola Wikee, Crous, K.D. Hyde & McKenzie; New combinations - P. foliorum (Sacc.) Wikee & Crous, P. philoprina (Berk. & M.A. Curtis) Wikee & Crous; Epitypifications (basionyms) - P. concentrica Sacc., P. cussoniae Cejp, P. owaniana G. Winter; Neotypifications (basionyms) - Phyllosticta cordylinophila P.A. Young, Physalospora gregaria var. foliorum Sacc., Sphaeropsis hypoglossi Mont., Sphaeropsis minima Berk. & M.A. Curtis.
Phyllosticta is a geographically widespread genus of plant pathogenic fungi with a diverse host range. This study redefines Phyllosticta, and shows that it clusters sister to the Botryosphaeriaceae (Botryosphaeriales, Dothideomycetes), for which the older family name Phyllostictaceae is resurrected. In moving to a unit nomenclature for fungi, the generic name Phyllosticta was chosen over Guignardia in previous studies, an approach that we support here. We use a multigene DNA dataset of the ITS, LSU, ACT, TEF and GPDH gene regions to investigate 129 isolates of Phyllosticta, representing about 170 species names, many of which are shown to be synonyms of the ubiquitous endophyte P. capitalensis. Based on the data generated here, 12 new species are introduced, while epitype and neotype specimens are designated for a further seven species. One species of interest is P. citrimaxima associated with tan spot of Citrus maxima fruit in Thailand, which adds a fifth species to the citrus black spot complex. Previous morphological studies lumped many taxa under single names that represent complexes. In spite of this Phyllosticta is a species-rich genus, and many of these taxa need to be recollected in order to resolve their phylogeny and taxonomy. TAXONOMIC NOVELTIES: New species - Phyllosticta abieticola Wikee & Crous, P. aloeicola Wikee & Crous, P. citrimaxima Wikee, Crous, K.D. Hyde & McKenzie, P. leucothoicola Wikee, Motohashi & Crous, P. mangifera-indica Wikee, Crous, K.D. Hyde & McKenzie, P. neopyrolae Wikee, Motohashi, Crous, K.D. Hyde & McKenzie, P. pachysandricola Wikee, Motohashi & Crous, P. paxistimae Wikee & Crous, P. podocarpicola Wikee, Crous, K.D. Hyde & McKenzie, P. rhaphiolepidis Wikee, C. Nakash. & Crous, P. rubra Wikee & Crous, P. vacciniicola Wikee, Crous, K.D. Hyde & McKenzie; New combinations - P. foliorum (Sacc.) Wikee & Crous, P. philoprina (Berk. & M.A. Curtis) Wikee & Crous; Epitypifications (basionyms) - P. concentrica Sacc., P. cussoniae Cejp, P. owaniana G. Winter; Neotypifications (basionyms) - Phyllosticta cordylinophila P.A. Young, Physalospora gregaria var. foliorum Sacc., Sphaeropsis hypoglossi Mont., Sphaeropsis minima Berk. & M.A. Curtis.
The genus Phyllosticta was introduced by Persoon (1818) with P. convallariae (nom. inval., lacking description) designated as the type species (Donk 1968), which is a synonym of P. cruenta (van der Aa 1973), which van der Aa & Vanev (2002) cited as type of the genus. Species of Phyllosticta are mostly plant pathogens of a broad range of hosts, and responsible for numerous diseases, including leaf and fruit spots. Some of these pathogens cause diseases of significant economic importance, e.g., P. citricarpa, the cause of citrus black spot, which is regarded as a quarantine pest in Europe and the USA (Baayen , Glienke ). Other economically important plant pathogenic species include the P. ampelicida species complex that causes black rot disease on grapevines (Wicht ), and the P. musarum species complex that causes banana freckle disease (Pu , Wong ). Some species of Phyllosticta have also been isolated as endophytes from a wide range of hosts, e.g., P. capitalensis. Other species are regarded as saprobes, e.g., P. carpogena and P. ericae (van der Aa 1973, Baayen , van der Aa & Vanev 2002, Glienke , Wikee ). Presently there are approximately 3 340 epithets known for Phyllosticta (www.MycoBank.org; accessed August 2013), but many of these reflect old concepts of the genus, and have since been accommodated elsewhere (van der Aa & Vanev 2002). Many species also produce spermatial or sexual states, which in some cases have been named in Leptodothiorella and Guignardia, respectively (van der Aa 1973).For many years researchers have confused the generic circumscription of Phoma and Phyllosticta. Both genera were recognised as pycnidial fungi forming unicellular, hyaline conidia. Allescher (1898) separated the two genera based on the infected part of the plant part, with Phyllosticta as foliar pathogens, and Phoma on other plant parts. This concept was further refined by Grove (1935) who regarded Phyllosticta as a parasite and Phoma as saprobe or wound parasite. Seaver (1922) and Grove (1935) separated “Phyllosticta” species based on host preference, as was common taxonomic practice in the 20th century. Seaver (1922) described 300 species, and Grove (1935) approximately 150. In both cases the host plant was the main criterion on which species were separated. Indeed, Seaver’s classification was largely characterised on spore size on host plants, while Grove arranged species under the alphabetically arranged host genera. Many Phyllosticta species were given specific epithets based on the host family, genus or species. For example, P. iridis on Iris versicolor (Iridaceae), P. eugeniae on Eugenia buxifolia (Myrtaceae), P. minor on Vinca minor (Apocynaceae), etc. (Seaver 1922). For the plant pathogenic Phyllosticta species, separation based on host species (or sometimes genus) has proven to be a good method to distinguish species, but this does not hold true for the endophytic or saprobic species.Viala & Ravaz (1892) introduced Guignardia as a replacement name for Laestadia Auersw. (1869), which was a later homonym of Laestadia Kunth ex Lessing (1832). Viala & Ravaz applied the name only to Sphaeria bidwellii (≡ G. bidwellii), a species that is different from L. alnea, the type species of Laestadia Auersw. (Bissett 1986). Petrak (1957) concluded that G. bidwellii and related species could be accommodated in Botryosphaeria, and Barr (1970, 1972) agreed with Petrak and placed Guignardia and Phyllosticta in Botryosphaeria, and other related species in Discosphaerina.Punithalingam (1974) suggested that the genus Guignardia must be confined to only those taxa with Phyllosticta morphs as typified by G. bidwellii (= P. ampelicida, see Zhang ). He stated that Botryosphaeria usually has larger ascomata and ascospores, and also a multilocular stroma, features that distinguish it from Guignardia. Van der Aa (1973) also pointed out that these two genera had different growth characteristics in culture. Following molecular studies, Schoch et al. (2006) placed Phyllosticta in the Botryosphaeriales. Since Botryosphaeria has been shown to be poly- and paraphyletic, numerous genera have been distinguished in the Botryosphaeriaceae (Crous , Phillips , Liu ). With the increasing use of molecular data to link asexual and sexual morphs, and the end of dual nomenclature for fungi (Hawksworth , Wingfield ), the oldest, more important and commonly used name, Phyllosticta, was chosen over that of Guignardia (Glienke , Sultan , Wikee et al.
2011, 2013, Wong ).The principal character by which a fungus is recognised as a species of Phyllosticta is by the production of pycnidia containing aseptate, hyaline conidia that are usually covered by a mucoid layer and bearing a single apical appendage (van der Aa 1973). However, the mucoid layer and appendage is not necessarily a universal feature, and some species such as P. colocasiicola, P. minima, and P. sphaeropsoidea lack these features. Furthermore, mucoid appendages formed on agar media may disappear with age, or vary in size and shape when the same isolate is compared on different media, e.g., pine needle agar, oatmeal agar, or potato dextrose agar. Presently Phyllosticta is circumscribed by pycnidia that are usually globose to subglobose, flattened above, and closely connected with the subepidermal pseudostroma. They are mostly unilocular but may be multilocular. The conidia are commonly hyaline, aseptate, ovoid, obovoid to ellipsoid, or short cylindrical, seldomly pyriform, globose or subglobose, and usually covered by a mucoid layer and bearing a single apical appendage (van der Aa 1973). The sexual morph is characterised by erumpent ascomata that are globose to pyriform in section, often irregularly shaped, unilocular, and with a central ostiole. The peridium is thin, comprising a few layers of angular cells. Asci are 8-spored, bitunicate, clavate to broadly ellipsoid, with a wide, obtusely rounded or slightly square apex, tapering gradually to a small pedicel, and with a well-developed ocular chamber. Ascospores are ellipsoid to limoniform, sometimes slightly elongated, aseptate, hyaline, often multiguttulate or with a large central guttule, and may have mucilaginous polar appendages or a sheath. A spermatial state may form in culture. Spermatia are hyaline, aseptate, cylindrical to dumbbell-shaped with guttules at each end (van der Aa 1973).Phyllosticta s. str. was first monographed by van der Aa (1973), who described and illustrated 46 species, and listed the sexual morphs for 12 species, and the spermatial morphs for 17 based mostly on material collected in Europe and North America. More recently van der Aa & Vanev (2002) revised all species names described in Phyllosticta, and provided a list of 190 accepted epithets, as well as a second list of excluded names that indicated their current disposition if known.In recent years DNA sequencing of conserved loci has vastly improved our knowledge of fungal phylogeny. Several studies have shown that phylogenetic analysis can resolve the taxonomy and identification of Phyllosticta spp. (Baayen , Wulandari , Glienke , Wikee ). Indeed, new species of Phyllosticta are increasingly described based on molecular results (Crous , Wang , Su & Cai 2012, Wong , Zhang ).Phyllosticta was placed in the order Botryosphaeriales by Schoch et al. (2006), who proposed that the Botryosphaeriaceae contained both Botryosphaeria and Phyllosticta, although no support was obtained for this relationship. Crous et al. (2006) and Liu et al. (2012) also classified Phyllosticta in the Botryosphaeriaceae. In both studies it was noted that Phyllosticta was distinct from other genera in the Botryosphaeriaceae, and that these authors eventually expected it to be placed elsewhere. Seaver (1922) used the order Phyllostictales and family Phyllostictaceae for the genus Phyllosticta. The family name Phyllostictaceae (as Phyllostictei) was first proposed by Fries (1849) and accepted by Hawksworth & David (1989). This family name is still available for use, and we suggest that Phyllosticta again be placed in this family, which is sister to the Botryosphaeriaceae (Botryosphaeriales).Although phylogenetic analysis has become a standard approach in fungal identification, phylogenetic studies should combine both molecular and morphological data to help discriminate taxa (Crous & Groenewald 2005, Hyde ). Suitable type material that can be sequenced is not available for many species of fungi, and thus neo- or epitypification is required in order to create a stable and workable taxonomy. The objectives of this study are: (1) to clarify relationships among species of Phyllosticta using multi-gene sequence data [internal transcribed spacer region (ITS), translation elongation factor 1-α gene (TEF1), actin gene (ACT), 28S rRNA gene (LSU) and glyceraldehyde-3-phosphate dehydrogenase gene (GPDH)] combined with morphological characteristics; (2) to provide a phylogenetic backbone for the genus Phyllosticta, and (3) to designate neo- or epitype specimens for fungal isolates that correlate well with original type material, thereby fixing the genetic application of these names.
MATERIAL AND METHODS
Isolates
A global collection of 160 strains of Phyllosticta associated with both leaf spot diseases and healthy leaves of various host plants were studied (Table 1). All isolates were sequenced and analysed together with sequences downloaded from GenBank. If fruit bodies were present on diseased tissue then a single spore isolation procedure as described by Chomnunti et al. (2011) was used to obtain cultures. To obtain isolates of Phyllosticta from diseased leaves of host plants when fruit bodies were not present, the leaf surface was cleaned by wiping with 70 % ethanol. Small pieces of leaf were then cut from the interface between healthy and diseased tissue. These were surface sterilised in 70 % ethanol, washed and plated onto ½ strength potato dextrose agar (½PDA). For isolation of endophytic species, healthy leaves were washed in tap water and wiped with 70 % ethanol. They were then cut into small pieces (about 1 × 1 cm), suspended in 70 % ethanol for 15 min (three times) and washed in distilled water (three times) before placing on ½PDA. All plates were incubated at 27 °C for 1 wk and observed daily. The growing tips of hyphae of Phyllosticta colonies that developed were cut out and transferred to fresh PDA plates. Isolates are deposited in Mae Fah Luang University Culture Collection (MFLUCC) and in the working collection of Pedro Crous housed at the CBS-KNAW Fungal Biodiversity Centre (CBS), Utrecht, The Netherlands (CPC). Other fungal isolates of representative Phyllosticta spp. were obtained from the CBS and added to this study (Table 1).
Table 1.
Phyllosticta isolates investigated in this study.
Species
Culture no.1
Host
Country
GenBank no.2
ITS
LSU
TEF1
ACT
GPDH
Botryosphaeria obtusa
CMW 8232
Conifers
South Africa
AY972105
-
DQ280419
AY972111
-
Guignardia mangiferae
CPC 17469
Cymbidium sp.
India
KF206189
-
-
KF289285
-
IMI 260576
Mangifera indica
India
JF261459
KF206222
JF261501
JF343641
JF343748
CPC 20260
Arecaceae
Thailand
KF206193
KF206243
KF289187
KF289294
KF289114
G. rhodorae
CBS 901.69
Rhododendron sp.
Netherlands
KF206174
KF206292
KF289230
KF289256
KF289166
Phyllosticta abieticola
CBS 112067
Abies concolor
Canada
KF170306
EU754193
-
KF289238
-
P. aloeicola
CPC 21020
Aloe ferox
South Africa
KF154280
KF206214
KF289193
KF289311
KF289124
CPC 21021
Aloe ferox
South Africa
KF154281
KF206213
KF289194
KF289312
KF289125
CPC 21022
Aloe ferox
South Africa
KF154282
KF206212
KF289195
KF289313
KF289126
CPC 21023
Aloe ferox
South Africa
KF154283
KF206211
KF289196
KF289314
KF289127
CPC 21024
Aloe ferox
South Africa
KF154284
KF206210
KF289197
KF289315
KF289128
P. beaumarisii
CBS 535.87 = IMI 298910
Muehlenbekia adpressa
Australia
AY042927
KF306229
KF289170
KF306232
KF289074
P. bifrenariae
CBS 128855 = VIC30556
Bifrenaria harrisoniae
Brazil
JF343565
KF206209
JF343586
JF343649
JF343744
CPC 17467
Bifrenaria harrisoniae
Brazil
KF170299
KF206260
KF289207
KF289283
KF289138
P. brazillianiae
CBS 126270 = LGMF330
Mangifera indica
Brazil
JF343572
KF206217
JF343593
JF343656
JF343758
LGMF 333
Mangifera indica
Brazil
JF343574
KF206216
JF343595
JF343658
JF343760
LGMF 334
Mangifera indica
Brazil
JF343566
KF206215
JF343587
JF343650
JF343752
P. capitalensis
CBS 173.77
Citrus aurantiifolia
New Zealand
KF206179
KF306231
FJ538393
KF289244
KF289100
CBS 226.77
Paphiopedilum callosum
Germany
FJ538336
KF206289
FJ538394
FJ538452
JF343718
CBS 356.52
Ilex sp.
Unknown
FJ538342
KF206300
FJ538400
FJ538458
KF289087
CBS 100175
Citrus sp.
Brazil
FJ538320
KF206327
FJ538378
FJ538436
JF343699
CBS 101228
Nephelium lappaceum
Hawaii
FJ538319
KF206325
FJ538377
FJ538435
KF289086
CBS 114751
Vaccinium sp.
New Zealand
EU167584
EU167584
FJ538407
FJ538465
KF289088
CBS 115046
Myracrodruon urundeuva
Brazil
FJ538322
KF206319
FJ538380
FJ538438
KF289082
CBS 115047
Aspidosperma polyneuron
Brazil
FJ538323
KF206318
FJ538381
FJ538439
KF289077
CBS 115049
Bowdichia nitida
Brazil
FJ538324
KF206317
FJ538382
FJ538440
KF289084
CBS 117118
Musa acuminata
Indonesia
FJ538339
JQ743603
FJ538397
FJ538455
KF289090
CBS 119720
Musa acuminata
Hawaii
KF206178
KF206316
FJ538398
KF289240
KF289098
CBS 120428
Sansevieria sp.
Netherlands
JN692544
KF206315
JN692532
JN692520
JN692509
CBS 123373
Musa paradisiaca
Thailand
FJ538341
JQ743604
FJ538399
FJ538457
JF343703
CBS 123404
Musa paradisiaca
Thailand
FJ538333
JQ743601
FJ538391
FJ538449
KF289095
CBS 128856
Stanhopea sp.
Brazil
JF261465
KF206304
JF261507
JF343647
JF343776
CPC 11337
Eucalyptus grandis
Brazil
KF206180
-
-
KF289259
-
CPC 11867
Acacia crassicarpa
Thailand
KF206181
KF206283
KF289184
KF289260
KF289108
CPC 12157
Acacia crassicarpa
Thailand
KF206182
-
-
KF289261
-
CPC 13987
Protea repens
Portugal
KF206183
KF206281
KF289176
KF289263
KF289083
CPC 14609
Zyzygium sp.
Madagascar
KF206184
KF206280
KF289175
KF289264
KF289081
CPC 16590
Citrus limon
Argentina
KF206185
KF206272
KF289177
KF289271
KF289091
CPC 16591
Citrus limon
Argentina
KF206186
KF206271
KF289179
KF289272
KF289093
CPC 16592
Citrus limon
Argentina
KF206187
KF206270
KF289178
KF289273
KF289092
CPC 17468
Cymbidium sp.
Brazil
KF206188
KF206259
KF289189
KF289284
KF289120
CPC 17748
Heliconia sp.
Thailand
KF206190
KF206258
KF289180
KF289286
KF289096
CPC 18848
Stanhopea graveolens
Brazil
JF261465
KF206255
JF261507
KF289289
JF343776
CPC 20251
Wild plant
Thailand
KC291333
KF206252
KC342553
KC342530
KF289101
CPC 20252
Punica granatum
Thailand
KC291334
KF206251
KC342554
KC342531
KF289097
CPC 20253
Scheffera venulosa
Thailand
KF206192
KF206250
KF289181
KF289293
KF289102
CPC 20254
Saccharum officinarum
Thailand
KC291335
KF206249
KC342555
KC342532
KF289103
CPC 20255
Arecaceae
Thailand
KC291336
KF206248
KC342556
KC342533
KF289115
CPC 20256
Ophiopogon japonicus
Thailand
KC291337
KF206247
KC342557
KC342534
KF289089
CPC 20257
Ficus benjamina
Thailand
KC291338
KF206246
KC342558
KC342535
KF289099
CPC 20258
Ophiopogon japonicus
Thailand
KC291339
KF206245
KC342559
KC342536
KF289094
CPC 20259
Orchidaceae
Thailand
KC291340
KF206244
KC342560
KC342537
KF289104
CPC 20263
Magnoliaceae
Thailand
KC291341
KF206241
KC342561
KC342538
KF289085
CPC 20265
Euphobiaceae
Thailand
KF206194
KF206239
KF289182
KF289297
KF289105
CPC 20266
Polyscias sp.
Thailand
KC291342
KF206238
KC342562
KC342539
KF289109
CPC 20267
Baccaurea ramiflora
Thailand
KF206195
KF206237
KF289173
KF306233
KF289078
CPC 20268
Hibiscus syriacus
Thailand
KC291343
KF206236
KC342563
KC342540
KF289117
CPC 20269
Ophiopogon japonicus
Thailand
KC291344
KF206235
KC342564
KC342541
KF289118
CPC 20270
Tectona grandis
Thailand
KC291345
KF206234
KC342565
KC342542
KF289110
CPC 20271
Crinum asiaticum
Thailand
KF206196
KF206233
KF289183
KF289298
KF289106
CPC 20272
Orchidaceae
Thailand
KC291346
KF206232
KC342566
KC342543
KF289079
CPC 20274
Mangifera indica
Thailand
KF206197
KF206231
KF289188
KF289299
KF289119
CPC 20275
Polyalthia longifolia
Thailand
KC291347
KF206230
KC342567
KC342544
KF289107
CPC 20278
Euphorbia milii
Thailand
KC291348
KF206227
KC342568
KC342545
KF289113
CPC 20423
Philodendron sp.
Thailand
KC291349
KF206226
KC342569
KC342546
KF289116
CPC 20508
Ixora chinensis
Thailand
KF206198
KF206225
KF289185
KF289302
KF289111
CPC 20509
Cordyline fruticosa
Thailand
KF206199
KF206224
KF289186
KF289303
KF289112
CPC 20510
Pyrrosia adnascens
Thailand
KF206200
KF206223
KF289174
KF289304
KF289080
CPC 21035
Citrus sp.
KF206201
-
-
KF289305
-
LGMF 219
Citrus sinensis
Brazil
KF206202
KF206220
JF261490
KF289306
JF343737
LGMF 220
Citrus sinensis
Brazil
KF206203
KF206219
JF261488
KF289307
JF343735
LGMF 222
Citrus sinensis
Brazil
KF206204
KF206218
JF261492
KF289308
JF343739
P. citriasiana
CBS 120486
Citrus maxima
Thailand
FJ538360
KF206314
FJ538418
FJ538476
JF343686
CBS 120487
Citrus maxima
China
FJ538361
KF206313
FJ538419
FJ538477
JF343687
CBS 120488
Citrus maxima
Thailand
JN692545
KF206312
JN692533
JN692521
KF289144
CBS 123370
Citrus maxima
Vietnam
FJ538355
KF206310
FJ538413
FJ538471
JF343689
CBS 123371
Citrus maxima
Vietnam
FJ538356
KF206309
FJ538414
FJ538472
JF343690
CBS 123372
Citrus maxima
Vietnam
FJ538357
KF206308
FJ538415
FJ538473
KF289145
P. citribraziliensis
CBS 100098
Citrus limon
Brazil
FJ538352
KF206221
FJ538410
FJ538468
JF343691
CPC 17464
Citrus sp.
Brazil
KF170300
KF206263
KF289224
KF289280
KF289159
CPC 17465
Citrus sp.
Brazil
KF170301
KF206262
KF289225
KF289281
KF289160
CPC 17466
Citrus sp.
Brazil
KF170302
KF206261
KF289226
KF289282
KF289161
P. citricarpa
CBS 102374
Citrus aurantium
Brazil
FJ538313
KF206324
GU349053
FJ538429
JF343679
CBS 120489
Citrus sinensis
Brazil
FJ538315
KF206311
FJ538373
FJ538431
KF289150
CBS 127454
Citrus limon
Australia
JF343583
KF206306
JF343604
JF343667
JF343771
CBS 127452
Citrus reticulata
Australia
JF343581
KF206307
JF343602
KF289241
JF343769
CBS 127455
Citrus sinensis
Australia
JF343584
KF206305
JF343605
JF343668
JF343772
CBS 122482
Citrus sinensis
Zimbabwe
FJ538317
KF306230
FJ538375
KF289265
KF289146
CPC 16586
Citrus limon
Argentina
KF170293
KF206274
KF289220
KF289269
KF289155
CPC 16587
Citrus limon
Argentina
KF170294
KF206273
KF289219
KF289270
KF289154
CPC 16603
Citrus limon
Uruguay
KF170295
KF206269
KF289213
KF289274
KF289147
CPC 16604
Citrus limon
Uruguay
KF206191
-
-
KF289292
-
CPC 16605
Citrus limon
Uruguay
KF170296
KF206268
KF289214
KF289275
KF289148
CPC 16606
Citrus limon
Uruguay
KF170297
KF206267
KF289215
KF289276
KF289149
CPC 16609
Citrus sp.
Argentina
KF170298
KF206266
KF289217
KF289277
KF289152
CPC 16149
Citrus sp.
Argentina
KF170290
KF206277
KF289216
KF289266
KF289151
CPC 16151
Citrus sp.
South Africa
KF170291
KF206276
KF289221
KF289267
KF289156
CPC 16152
Citrus sp.
South Africa
KF170292
KF206275
KF289218
KF289268
KF289153
P. citrichinaensis
ZJUCC 200956
Citrus reticulata
China
JN791620
-
JN791459
JN791533
-
ZJUCC 200964
Citrus maxima
China
JN791611
-
JN791461
JN791535
-
ZJUCC 2010150
Citrus maxima
China
JN791662
-
JN791514
JN791582
-
ZJUCC 2010152
Citrus sinensis
China
JN791664
-
JN791515
JN791589
-
P. citrimaxima
CPC 20276 = MFLUCC10-0137 = CBS 136059
Citrus maxima
Thailand
KF170304
KF206229
KF289222
KF289300
KF289157
P. concentrica
CBS 937.70
Hedera helix
Italy
FJ538350
KF206291
FJ538408
KF289257
JF411745
CBS 134749 = CPC 18842
Hedera sp.
Spain
KF170310
KF206256
KF289228
KF289288
KF289163
P. cordylinophila
CPC 21880 = MUCCJ 521
Cordyline fruticosa
Japan
AB454357
AB454357
-
AB704244
-
CPC 20261 = MFLUCC10-0166 = WK024
Cordyline fruticosa
Thailand
KF170287
KF206242
KF289172
KF289295
KF289076
CPC 20277 = MFLUCC12-0014 = WK048
Cordyline fruticosa
Thailand
KF170288
KF206228
KF289171
KF289301
KF289075
P. cornicola
CBS 111639
Cornus florida
USA
KF170307
-
-
KF289234
-
P. cussonia
CPC 13812
Cussonia sp.
South Africa
KF170311
KF206282
KF289223
KF289262
KF289158
CPC 14873
Cussonia sp.
South Africa
JF343578
KF206279
JF343599
JF343662
JF343764
CPC 14875
Cussonia sp.
South Africa
JF343579
KF206278
JF343600
JF343663
JF343765
P. elongata
CBS 126.22
Oxycoccus macrocarpos
USA
FJ538353
AB095508
FJ538411
FJ538469
KF289164
P. ericarum
CBS 132534 = CPC 19744
Erica gracilis
South Africa
KF206170
KF206253
KF289227
KF28291
KF289162
P. eugeniae
CBS 445.82
Eugenia aromatica
Indonesia
AY042926
KF206288
KF289208
KF289246
KF289139
P. foliorum
CBS 174.77
Cryptomeria japonica
USA
KF170308
KF206290
KF289200
KF289245
KF289131
CBS 447.68
Taxus baccata
Netherlands
KF170309
KF206287
KF289201
KF289247
KF289132
P. gaultheriae
CBS 447.70
Gaultheria humifusa
USA
JN692543
KF206298
JN692531
KF289248
JN692508
P. hamamelidis
MUCC 149
Hamamelis japonica
Japan
KF170289
-
-
KF289309
-
P. hostae
CGMCC 3.14355
Hosta plantaginea
China
JN692535
-
JN692523
JN692511
JN692503
CGMCC 3.14356
Hosta plantaginea
China
JN692536
-
JN692524
JN692512
JN692504
CGMCC 3.14357
Hosta plantaginea
China
JN692537
-
JN692525
JN692513
JN692505
P. hubeiensis
CGMCC 3.14986
Viburnum odoratissimim
China
JX025037
-
JX025042
JX025032
JX025027
CGMCC 3.14987
Viburnum odoratissimim
China
JX025038
-
JX025043
JX025033
JX025028
CGMCC 3.14988
Viburnum odoratissimim
China
JX025039
-
JX025044
JX025034
JX025029
P. hymenocallidicola
CBS 131309
Hymenocallis littoralis
Australia
JQ044423
JQ044443
KF289211
KF289242
KF289142
CPC 19331
Hymenocallis littoralis
Australia
KF170303
KF206254
KF289212
KF289290
KF289143
P. hypoglossi
CBS 101.72
Ruscus aculeatus
Italy
FJ538365
KF206326
FJ538423
FJ538481
JF343694
CBS 167.85
Ruscus hypoglossum
Italy
FJ538366
KF206302
FJ538424
FJ538482
JF343696
CBS 434.92
Ruscus aculeatus
Italy
FJ538367
KF206299
FJ538425
FJ538483
JF343695
P. ilicis-aquifolii
CGMCC 3.14358
Ilex aquifolium
China
JN692538
-
JN692526
JN692514
-
CGMCC 3.14359
Ilex aquifolium
China
JN692539
-
JN692527
JN692515
-
CGMCC 3.14360
Ilex aquifolium
China
JN692540
-
JN692528
JN692516
-
P. leucothoicola
MUCC 553 = CBS 136073
Leucothoe catesbaei
Japan
AB454370
AB454370
-
KF289310
-
P. mangifera-indica
CPC 20274 = MFLUCC10-0029
Mangifera indica
Thailand
KF170305
KF206240
KF289190
KF289296
KF289121
P. minima
CBS 585.84 = IFO 32917
Acer rubrum
USA
KF206176
KF206286
KF289204
KF289249
KF289135
P. neopyrolae
CPC 21879 = MUCC 125
Pyrola asarifolia
Japan
AB454318
AB454318
-
AB704233
-
P. owaniana
CBS 776.97 = CPC 1009
Brabejum stellatifolium
South Africa
FJ538368
KF206293
FJ538426
KF289254
JF343767
CPC 14901
Brabejum stellatifolium
South Africa
JF261462
KF206303
JF261504
KF289243
JF343766
P. pachysandricola
MUCC 124 = NBRC 102276
Pachysandra terminalis
Japan
AB454317
AB454317
-
AB704232
-
P. paxistimae
CBS 112527
Paxistima mysinites
USA
KF206172
KF206320
KF289209
KF289239
KF289140
P. philoprina
CBS 587.69
Ilex aquifolium
Spain
KF154278
KF206297
KF289206
KF289250
KF289137
CBS 616.72
Ilex aquifolium
Germany
KF154279
KF206296
KF289205
KF289251
KF289136
P. podocarpicola
CBS 728.79
Podocarpus maki
USA
KF206173
KF206295
KF289203
KF289252
KF289134
P. podocarpi
CBS 111646
Podocarpus falcatus
South Africa
AF312013
KF206323
KC357671
KC357670
KF289169
CBS 111647
Podocarpus lanceolata
South Africa
KF154276
KF206322
KF289232
KF289235
KF268168
P. pseudotsugae
CBS 111649
Pseudotsuga menziesii
USA
KF154277
KF206321
KF289231
KF289236
KF289167
P. rhaphiolepidis
MUCC 432
Rhaphiolepis indica
Japan
DQ632660
-
DQ632724
AB704242
-
P. rubra
CBS 111635
Acer rubrum
USA
KF206171
EU754194
KF289198
KF289233
KF289129
P. sphaeropsoidea
CBS 756.70 = IFO 32905
Aesculus hippocastanum
Germany
AY042934
KF206294
KF289202
KF289253
KF289133
P. spinarum
CBS 292.90
Chamaecyparis pisifera
France
JF343585
KF206301
JF343606
JF343669
JF343773
P. styracicola
CGMCC 3.14985
Styrax gradiflorus
China
JX052040
-
JX025045
JX025035
JX025030
CGMCC 3.14989
Styrax gradiflorus
China
JX052041
-
JX025046
JX025036
JX025031
P. telopeae
CBS 777.97
Telopea speciosissima
Tasmania
KF206205
KF206285
KF289210
KF289255
KF289141
P. vacciniicola
CPC 18590
Vaccinium macrocarpum
USA
KF170312
KF206257
KF289229
KF289287
KF289165
P. yuccae
CBS 112065
Yucca elephantipes
USA
KF206175
-
-
KF289237
-
Phyllosticta sp.
CPC 11336
Eucalyptus globulus
Spain
KF206177
KF206284
KF289199
KF289258
KF289130
MUCC 147
Rhododendron keiskei
Japan
AB454319
AB454319
-
AB704234
-
CPC 17454
Mangifera indica
Brazil
KF206206
KF206265
KF289192
KF289278
KF289123
CPC 17455
Mangifera indica
Brazil
KF206207
KF206264
KF289191
KF289279
KF289122
CPC: Culture collection of P.W. Crous, housed at CBS; IFO: Institute For Fermentation, Osaka, Japan; IMI: International Mycological Institute, CABI-Bioscience, Egham, Bakeham Lane, U.K.; LGMF: Culture collection of Laboratory of Genetics of Microorganisms, Federal University of Parana, Curitiba, Brazil; CBS: CBS-KNAW Fungal Biodiversity Centre, Utrecht, the Netherlands; ZJUCC: Zhejiang University Culture Collection, China; MFLUCC: Mae Fah Luang University Culture Collection; CGMCC: China, General Microbiological Culture Collection, Beijing, China; MUCC: Culture Collection, Laboratory of Plant Pathology, Mie University, Tsu, Mie prefecture, Japan. Type and ex-type cultures are in bold.
ITS: Internal transcribed spacers 1 and 2 together with 5.8S nrDNA; LSU: large subunit 28S nrDNA; TEF1: partial translation elongation factor 1-α gene; ACT: partial actin gene; GPDH: partial glyceraldehyde-3-phosphate dehydrogenase gene.
Phyllosticta isolates investigated in this study.CPC: Culture collection of P.W. Crous, housed at CBS; IFO: Institute For Fermentation, Osaka, Japan; IMI: International Mycological Institute, CABI-Bioscience, Egham, Bakeham Lane, U.K.; LGMF: Culture collection of Laboratory of Genetics of Microorganisms, Federal University of Parana, Curitiba, Brazil; CBS: CBS-KNAW Fungal Biodiversity Centre, Utrecht, the Netherlands; ZJUCC: Zhejiang University Culture Collection, China; MFLUCC: Mae Fah Luang University Culture Collection; CGMCC: China, General Microbiological Culture Collection, Beijing, China; MUCC: Culture Collection, Laboratory of Plant Pathology, Mie University, Tsu, Mie prefecture, Japan. Type and ex-type cultures are in bold.ITS: Internal transcribed spacers 1 and 2 together with 5.8S nrDNA; LSU: large subunit 28S nrDNA; TEF1: partial translation elongation factor 1-α gene; ACT: partial actin gene; GPDH: partial glyceraldehyde-3-phosphate dehydrogenase gene.
Morphology
Growth rates, culture characteristics, and morphology of the isolates were determined at 27 °C. Sporulation was induced by growth on pine needle agar (PNA) (Smith ) and synthetic nutrient-poor agar (SNA) under near UV-light. Colony colour and growth rate were established on PDA, malt extract agar (MEA) and oatmeal agar (OA) according to Crous et al. (2009). Culture characteristics were assessed, and the colour of upper and lower sides of cultures was determined after 14 d in the dark at 27 °C. Colony colour on MEA, OA and PDA was determined with the colour charts of Rayner (1970). Nomenclatural novelties and descriptions were deposited in MycoBank (www.mycobank.org; Crous ).
DNA extraction, amplification, and sequencing
Total genomic DNA was extracted from cultures grown on MEA for 2-3 d using the UltraClean™ Microbial DNA isolation kits (Mo Bio Laboratories, Inc., California, USA) according to the manufacturer’s protocol. Partial regions of five loci were amplified including actin (ACT) using primers ACT-512F and ACT-783R (Carbone & Kohn 1999); the internal transcribed spacer region (ITS) of the nuclear rDNA using primers V9G (de Hoog & Gerrits van den Ende 1998) and ITS4 (White ), the 28S large subunit nrDNA (LSU) using primers LROR (Moncalvo ) and LR5 (Vilgalys & Hester 1990); translation elongation factor 1-α using primers EF1-728F (Carbone & Kohn 1999) and EF2 (O’Donnell ); and glyceraldehyde-3-phosphate dehydrogenase (GPDH) using primers Gpd1-LM and Gpd2-LM (Myllys ). For Phyllosticta citricarpa isolates, GPDH was amplified using primers Gpd1 (Guerber ) and GPDHR2 (Glienke ). The PCR reaction mixtures and cycling conditions were followed as described by Glienke et al. (2011).Amplified fragments were sequenced in both directions using the same primers pairs used for amplification. For this purpose, the BigDye Terminator Cycle Sequencing Kit v. 3.1 (Applied Biosystems™, Foster City, CA, USA) containing AmpliTaq DNA Polymerase was used. The amplified products were analysed on an automated 3730xl DNA analyzer (Life Technologies Europe BV, Applied Biosystems™, Bleiswijk, The Netherlands). Sequences generated were assembled and aligned using MEGA v. 5.05 (Tamura ) and MAFFT v. 6 (http://mafft.cbrc.jp/alignment/server/), respectively. The sequences were manually aligned as necessary.
Molecular phylogeny
Phylogenetic analyses were based on both Maximum Parsimony (MP) and Bayesian inference (BI). The MP analyses were done using PAUP (Phylogenetic Analysis Using Parsimony, v. 4.0b10; Swofford 2003). Phylogenetic relationships were estimated by heuristic searches with 1 000 random addition sequences. Tree bisection-reconnection was used, with the branch swapping option set on “best trees” only with all characters weighted equally and alignment gaps treated as fifth state. Tree length (TL), consistency index (CI), retention index (RI) and rescaled consistence index (RC) were calculated for parsimony and bootstrap analysis (Hillis & Bull 1993) was based on 1 000 replications.For BI, the best evolutionary models for each partition were determined using MrModeltest (Nylander 2004) and incorporated into the analyses. MrBayes v. 3.2.1. (Ronquist & Huelsenbeck 2003) was used to generate phylogenetic trees under optimal criteria per partition. A Markov Chain Monte Carlo (MCMC) algorithm of four chains was started in parallel from a random tree topology with the heating parameter set at 0.3. The MCMC analysis lasted until the average standard deviation of split frequencies came below 0.01 with trees saved every 1 000 generations. The first 25 % of saved trees were discarded as the “burn-in” phase and posterior probabilities (PP) determined from the remaining trees.
RESULTS
Phylogenetic relationships were determined for the ITS and ACT gene sequences of 160 Phyllosticta strains (including one outgroup). The combined partial dataset of Phyllosticta comprised 883 characters (including gaps), of which 341 characters are constant, and 150 characters are variable and parsimony-uninformative. Parsimony analysis generated 1 000 trees, one of which is presented as shown in Fig. 1 (TL = 2099, CI = 0.481, RI = 0.898, RC = 0.432). The phylogenetic tree of the ITS and ACT region resolved 46 clades (see Table 1 for details). The Bayesian consensus tree confirmed the tree topology and bootstrap support of the strict consensus tree obtained with MP.
Fig. 1.
One of 1 000 equally most parsimonious trees obtained from a heuristic search with 1 000 random taxon additions of the combined ACT and ITS sequence alignments. Bootstrap support values and Bayesian posterior probability values are indicated at the nodes. Branches present in both the consensus trees of the MP and BI are thickened. Substrate and country of origin, where known, are indicated next to the strain numbers. The tree was rooted to Diplodia seriata (CMW 8232)
One of 1 000 equally most parsimonious trees obtained from a heuristic search with 1 000 random taxon additions of the combined ACT and ITS sequence alignments. Bootstrap support values and Bayesian posterior probability values are indicated at the nodes. Branches present in both the consensus trees of the MP and BI are thickened. Substrate and country of origin, where known, are indicated next to the strain numbers. The tree was rooted to Diplodia seriata (CMW 8232)A second analysis including all isolates for which a complete dataset were available (129 strains including the outgroup) was run based on ITS, LSU, ACT, TEF1 and GPDH (Table 1). The combined partial dataset of Phyllosticta comprised 2 577 characters (including gaps), of which 1 547 characters are constant, 296 characters are variable and parsimony-uninformative. Parsimony analysis generated 1 000 trees, of which one is shown in Fig. 2 (TL = 3173, CI = 0.517, RI = 0.906, RC = 0.468). The phylogenetic tree using combined multi-gene data resolved 33 clades (see Table 1 for details). The Bayesian consensus tree confirmed the tree topology and bootstrap support of the strict consensus tree obtained with MP.
Fig. 2.
One of 1 000 equally most parsimonious trees obtained from a heuristic search with 1 000 random taxon additions of the combined ACT, GPDH, ITS, LSU and TEF1 sequence alignments. Bootstrap support values and Bayesian posterior probability values are indicated at the nodes. Branches present in both the consensus trees of the MP and BI are thickened. Substrate and country of origin, where known, are indicated next to the strain numbers. The tree was rooted to Diplodia seriata (CMW 8232).
One of 1 000 equally most parsimonious trees obtained from a heuristic search with 1 000 random taxon additions of the combined ACT, GPDH, ITS, LSU and TEF1 sequence alignments. Bootstrap support values and Bayesian posterior probability values are indicated at the nodes. Branches present in both the consensus trees of the MP and BI are thickened. Substrate and country of origin, where known, are indicated next to the strain numbers. The tree was rooted to Diplodia seriata (CMW 8232).
Taxonomy
Phyllosticta is distinct from members of the Botryosphaeriaceae in cultural characteristics (slow growing, black erumpent colonies vs. grey, fluffy, fast-growing colonies). Morphologically it is also distinct, having conidia encased in a mucoid sheath and often with an apical appendage. The sexual morph has ascomata unilocular, ascospores frequently with mucoid caps, and hamathecial tissue disintegrating at maturity, which collectively differs from those in the Botryosphaeriaceae. Phyllosticta is also phylogenetically supported as distinct from members of the Botryosphaeriaceae (see Slippers , this volume), we choose to place it in the Phyllostictaceae that was originally erected to accommodate this genus.Fr. (as “Phyllostictei”), Summa veg. Scand., Section Post. (Stockholm): 420. 1849.Foliicolous, plant pathogenic, endophytic or saprobic. Ascomata pseudothecial, separate to gregarious, globose, brown to black, with a central ostiole. Asci bitunicate, fissitunicate, clavate to subcylindrical, 8-spored, fasciculate, stipitate, with an ocular chamber. Pseudoparaphyses mostly absent at maturity (see Sultan et al. 2013), filamentous, branched, septate when present. Ascospores bi- to triseriate, hyaline, aseptate, ellipsoid-fusoid to limoniform, smooth-walled, usually with mucilaginous caps at ends, or surrounded by a mucilaginous sheath. Asexual morph: Conidiomata pycnidial globose, dark brown, separate to aggregated, with a central ostiole; wall of 3-6 layers of brown textura angularis. Conidiogenous cells lining the inner wall, hyaline, smooth, subcylindrical to ampulliform or doliiform, proliferating percurrently near apex, frequently covered in mucilaginous sheath. Conidia hyaline, smooth, ellipsoid-fusoid to obovoid or ovoid, aseptate, smooth-walled, guttulate or granular, frequently surrounded by a mucilaginous sheath, and bearing a single mucilaginous apical appendage.Type genus: Phyllosticta Pers.Pers., Traité sur les Champignons Comestibles (Paris): 55. 147. 1818.Conidiomata and spermatogonia pycnidial, immersed, subepidermal to erumpent, unilocular, rarely multilocular, glabrous, ostiolate, dark brown to black; ostiole circular to oval; pycnidial wall of thick-walled, dark brown textura angularis, with inner layers of hyaline to pale brown, thin-walled textura prismatica to angularis. Conidiophores lining the cavity of the conidioma, reduced to conidiogenous cells, invested in mucus. Conidiogenous cells discrete, producing macroconidia and spermatia (also produced in separate spermatogonia), ampulliform, lageniform, doliiform to subcylindrical, hyaline, smooth, proliferating several times percurrently near the apex, invested in a mucoid layer. Spermatogenous cells ampulliform to lageniform or subcylindrical, hyaline smooth, phialidic. Conidia ellipsoid-fusoid to obovoid or ovoid, rarely subcylindrical, aseptate, broadly rounded at the apex, often tapering strongly toward the base, unicellular, hyaline, smooth-walled, guttulate to granular, often enclosed in a persistent mucilaginous sheath, and bearing an unbranched, tapering, straight to curved, mucoid apical appendage. Spermatia hyaline, smooth, granular, subcylindrical or dumbbell-shaped, with rounded or blunt ends. Ascomata pseudothecial, separate to gregarious, globose to subglobose, brown to black, unilocular with a central ostiole. Asci bitunicate, fissitunicate, clavate to subcylindrical, 8-spored, fasciculate, stipitate, with an ocular chamber. Pseudoparaphyses mostly absent at maturity, filamentous, branched, septate when present. Ascospores bi- to triseriate, hyaline, guttulate to granular, aseptate, ellipsoid, ellipsoid-fusoid to limoniform, smooth-walled, usually with mucilaginous caps at ends, or surrounded by a mucilaginous sheath.Type species: P. convallariae Pers., nom. inval. (= P. cruenta (Fr.) J. Kickx f.)Wikee & Crous, sp. nov. MycoBank MB805654. Fig. 3.
Fig. 3.
Phyllosticta abieticola (CBS 112067). A. Conidiomata and ascomata forming on PNA. B, C. Asci with ascospores. D. Conidiogenous cells giving rise to conidia. E, F. Conidia with mucoid sheaths and apical appendages. Scale bars = 10 μm.
Phyllosticta abieticola (CBS 112067). A. Conidiomata and ascomata forming on PNA. B, C. Asci with ascospores. D. Conidiogenous cells giving rise to conidia. E, F. Conidia with mucoid sheaths and apical appendages. Scale bars = 10 μm.Etymology: Named after the host genus from which it was collected, Abies.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 250 μm diam, elongated in culture on PNA; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 15 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, that can be branched at the base, 10-25 × 4-6 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 7-15 × 3-5 μm; proliferating several times percurrently near apex. Conidia (11-)13-16(-18) × (7-)8 μm, solitary, hyaline, aseptate, thin and smooth-walled, granular, or with a single large central guttule, fusoid-ellipsoid, tapering towards a narrow truncate base, 2-3 μm diam, enclosed in a thin persistent mucoid sheath, 3-4 μm thick, and bearing a hyaline, apical mucoid appendage, (15-)20-25(-30) × 1.5(-2) μm, flexible, unbranched, tapering towards an acutely rounded tip. Ascomata similar to conidiomata in general anatomy. Asci bitunicate, hyaline, clavate to broadly fusoid-ellipsoid, with visible apical chamber, 2 μm diam, 65-120 × 12-15 μm. Ascospores bi- to multiseriate, hyaline, smooth, granular to guttulate, aseptate, straight, rarely curved, widest in the middle, limoniform with obtuse ends, (15-)16-18(-20) × (6-)7 μm.Culture characteristics: Colonies erumpent, spreading with moderate aerial mycelium, covering dish after 1 mo at 25 °C. On OA surface iron-grey. On PDA and MEA surface grey-olivaceous, reverse iron-grey.Specimen examined. Canada, on living leaf of Abies concolor, Jan. 2001, M. Forve (holotype
CBS H-21389, ex-type culture CBS 112067).Notes: The present isolate of P. abieticola was originally identified as P. abietis, which is distinguished by having smaller conidia (7-12 × 6.5-9 μm), and a sheath up to 1.5 μm wide, with apical appendages up to 2.5 μm long when present (Bissett & Palm 1989).Wikee & Crous, sp. nov. MycoBank MB805655. Fig. 4.
Fig. 4.
Phyllosticta aloeicola (CPC 20677). A. Aloe with dead leaf tips that harbour P. aloeicola. B. Immersed conidiomata on leaf tissue. C, D. Conidiogenous cells giving rise to conidia. E-G. Conidia. Scale bars = 10 μm.
Phyllosticta aloeicola (CPC 20677). A. Aloe with dead leaf tips that harbour P. aloeicola. B. Immersed conidiomata on leaf tissue. C, D. Conidiogenous cells giving rise to conidia. E-G. Conidia. Scale bars = 10 μm.Etymology: Named after the host genus from which it was collected, Aloe.Associated with leaf tip blight. Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 250 μm diam; pycnidial wall of several layers of textura angularis, up to 40 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 20 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 5-13 × 3-4 μm; proliferating several times percurrently near apex. Conidia (8-)14-18(-27) × (6.5-) 7-8(-9) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, ellipsoid to obovoid or subcylindrical, tapering towards a narrow truncate base, 3-5 μm diam, enclosed in a thin, persistent mucoid sheath, 1-2 μm thick, and bearing a hyaline, apical mucoid appendage, (7-)15-20(-23) × 2-3(-3.5) μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies erumpent, spreading, with sparse aerial mycelium and feathery margins, covering the dish in 1 mo. On MEA surface olivaceous-grey, reverse iron-grey; on OA and PDA iron-grey on surface and reverse.Specimen examined: South Africa, Free State Province, Bloemfontein Botanical Garden, Bloemfontein, on living leaf of Aloe ferox, 7 May 2012, P.W. Crous & W.J. Swart (holotype
CBS H-21390, culture ex-type CPC 21020 = CBS 136058).Notes: Phyllosticta aloeicola and P. aloës were both isolated from Aloe latifolia in South Africa. Van der Aa & Vanev (2002) examined the type specimen of P. aloës (deposited in B), and concluded that it was either a Phoma or Asteromella sp.Wikee, Crous, K.D. Hyde & McKenzie, sp. nov. MycoBank MB803675. Fig. 5.
Fig. 5.
Phyllosticta citrimaxima (CPC 20276). A-C. Symtoms on host. D, E. Vertical section through conidioma showing developing conidia. F-H.Conidia. I, J. Spermatial state, spermogonium. K. Conidia produced on OA. Scale bars: D = 30 μm; E-J = 10 μm.
Phyllosticta citrimaxima (CPC 20276). A-C. Symtoms on host. D, E. Vertical section through conidioma showing developing conidia. F-H.Conidia. I, J. Spermatial state, spermogonium. K. Conidia produced on OA. Scale bars: D = 30 μm; E-J = 10 μm.Etymology: Named after this host on which it occurs, Citrus maxima.Conidiomata pycnidial (on PNA), forming after 4 d of incubation, black, superficial, globose, 150-160 × 120-130 μm; wall 1-3 layers, 20-30 μm thick. Conidiogenous cells developing after 5 d, lining wall of pycnidium, phialidic, cylindrical, hyaline, 3-5 × 1-2 μm. Conidia ellipsoidal, hyaline, 1-celled, smooth, 5(-8) × (3-)4(-7) μm, surrounded by mucilaginous sheath, 1 μm thick, bearing a single, apical appendage, 2-16 μm long.Culture characteristics: On OA, colonies flat, with irregular margin, initially hyaline with abundant mycelium, gradually becoming greenish after 2-3 d. On MEA colonies woolly, irregular, initially white with abundant mycelium, gradually becoming greenish to dark green after 2-3 d with white hyphae on the undulate margin, eventually turning black; reverse dark green to black. After 25 d in the dark at 27 °C the colony covered the whole plate. On PDA, colonies were flat, rather fast growing, initially white with abundant mycelium, gradually becoming greenish to dark green after 2-3 d, with white hyphae at the margin, eventually turning black; reverse black and after 14 d in the dark at 27 °C colony covered the whole plate.Specimen examined: Thailand, Chiangrai, Weing Khaen, on fruit peel of Citrus maxima, Jun. 2011, S. Wikee (holotype MFLU 13-0001, ex-type culture CPC 20276 = MFLUCC10-0137 = CBS 136059).Notes: Phyllosticta citrimaxima was isolated from tan spots on the fruit surface of Citrus maxima, which is grown as an economically important crop in Thailand and Asia. Recently, P. citriasiana, and P. citrichinaensis were described from Citrus maxima in Vietnam and China (Wulandari , Wang ), and P. citribraziliensis from Brazil (Glienke ). Phyllosticta citrimaxima is well supported phylogenetically (Fig. 1). Wang et al. (2012) provided a table in which they compared the morphology of five Phyllosticta species associated with citrus: P. citricarpa, P. citriasiana, P. capitalensis, P. citribraziliensis, and P. citrichinaensis. Phyllosticta citrimaxima produces smaller conidia (5-8 × 3-7 μm) than P. citricarpa (11-12 × 6-8 μm), P. citriasiana (12-14 × 6-7 μm), P. capitalensis (11-12 × 6-7 μm), P. citribraziliensis (10-12 × 6-7 μm) and P. citrichinaensis (8-12 × 6-9 μm), and has longer apical appendages (2-16 μm) than any of these four species, except P. citrichinaensis (14-26 μm).Sacc., Nuovo Giorn. Bot. Ital. 8: 203. 1876. Fig. 6.
Fig. 6.
Phyllosticta concentrica (CBS 937.70). A. Conidiomata sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.
Phyllosticta concentrica (CBS 937.70). A. Conidiomata sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 400 μm diam, elongated in culture on PNA; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 25 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, that gives rise to 1-2 conidiogenous cells, 12-20 × 4-6 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 7-10 × 3-6 μm; proliferating several times percurrently near apex. Conidia (10-)11-13(-14) × (6-)8(-9) μm, solitary, hyaline, aseptate, thin and smooth-walled, granular, or with a single large central guttule, ellipsoid, tapering towards a narrow truncate base, 2-3 μm diam, enclosed in a thin persistent mucoid sheath, 1-2 μm thick, and bearing a hyaline, apical mucoid appendage, (5-)8-12(-15) × (1-)1.5 μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies flat, spreading with sparse aerial mycelium, and feathery, lobate margins, reaching 30 mm after 2 wk at 25 °C. On PDA surface greenish black, reverse iron-grey; on OA surface iron-grey; on MEA surface olivaceous-grey in centre, pale olivaceous-grey in outer region, olivaceous-grey underneath.Specimens examined. Italy, Padua, on withering leaves of Hedera helix, Jul. 1875, syntype (L); Sardegna, Cologne near Oleina, leaf litter of Hedera helix, 31 Aug. 1970, W. Gams (epitype designated here
CBS H-16992, culture ex-epitype CBS 937.70; MBT176244). Spain, on living leaf of Hedera sp., 10 Jul. 2010, U. Damm, culture CPC 18842 = CBS 134749.Notes: Phyllosticta concentrica, and its purported sexual state, Guignardia philoprina, represent different taxa, with each name representing a species complex for which numerous old names are available. Phyllosticta concentrica was originally introduced by Saccardo for a species occurring on Hedera helix in Italy, but which appears to be common in Europe on this host. The present collection closely matches the original description of P. concentrica in morphology, for which an epitype is designated.P.A. Young, Bulletin of the Bernice P. Bishop Museum, Honolulu, Hawaii 19: 133. 1925. Fig. 7.
Fig. 7.
Phyllosticta cordylinophila (CPC 20261). A. Conidiomata sporulating on PNA. B. Conidiomata sporulating on OA. C. Conidioma with ostiole (arrowed). D, E. Conidiogenous cells giving rise to conidia. F. Conidia. Scale bars = 10 μm.
Phyllosticta cordylinophila (CPC 20261). A. Conidiomata sporulating on PNA. B. Conidiomata sporulating on OA. C. Conidioma with ostiole (arrowed). D, E. Conidiogenous cells giving rise to conidia. F. Conidia. Scale bars = 10 μm.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless to opaque conidial masses; pycnidia up to 200 μm diam; pycnidial wall of 3-6 layers of textura angularis, up to 40 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 20 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, at times branched at base, 10-20 × 4-6 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 10-17 × 3-6 μm; proliferating several times percurrently near apex. Conidia (10-)11-13(-15) × 7-8(-11) μm, solitary, hyaline, aseptate, thin and smooth walled, coarsely guttulate, or with a single large central guttule, ellipsoid to obovoid, tapering towards a narrow truncate base, 2-3 μm diam, enclosed in a thin, persistent mucoid sheath, 1-2 μm thick, and bearing a hyaline, apical mucoid appendage, (10-)20-35(-40) × 2(-3) μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies spreading, erumpent, with sparse aerial mycelium and even, smooth margins. On MEA surface pale olivaceous-grey in centre, dirty white in outer region, reverse iron-grey; on OA olivaceous-grey; on PDA olivaceous-grey on surface and reverse.Specimens examined: Thailand, Chiangrai, Nang lae, Pasang, on leaf spot of Cordyline fruticosa, Nov. 2011, S. Wikee (neotype designated here
CBS H-21391, ex-neotype culture CPC 20261 = WK024 = CBS 136244; MBT176245). Japan, Kagoshima, Amami-Ohshima, Amagi, on C. fruticosa, 22 Oct. 2003, Y. Ono & T. Kobayashi, culture ex-type MUCCJ 521 = CPC 21880 = CBS 136072.Notes: Van der Aa (1973) did not locate type material, and the material studied by Petrak & Sydow (1927) was depauperate. As the present collections match the morphology of the original species description [conidia ellipsoid to ovoid, 7-12(-15) × 5-7.5(-8) μm], we herewith designate one specimen as neotype.(DC.) Rabenh., Klotzschii Herb. Viv. Mycol., Edn 2: no. 454. 1857. Fig. 8.
Fig. 8.
Phyllosticta cornicola (CBS 111639). A. Conidiomata sporulating on PNA. B. Conidiomata forming on OA. C-E. Conidiophores giving rise to conidia. F. Conidia. Scale bars = 10 μm.
Phyllosticta cornicola (CBS 111639). A. Conidiomata sporulating on PNA. B. Conidiomata forming on OA. C-E. Conidiophores giving rise to conidia. F. Conidia. Scale bars = 10 μm.Basionym: Sphaeria lichenoides var. cornicola DC., in de Candolle & Lamarck, Fl. franç., Edn 3 (Paris) 6: 148. 1815.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 200 μm diam; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 10 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1-2 supporting cells, that can be branched at the base, 10-20 × 4-5 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 7-12 × 2.5-4 μm; proliferating several times percurrently near apex. Conidia (6-)7-8 × (5.5-)6(-7) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, ellipsoid to obovoid, tapering towards a narrow truncate base, 2-3 μm diam, enclosed in a thin persistent mucoid sheath, 1 μm thick, and bearing a hyaline, apical mucoid appendage, (3-) 4-5(-7) × 1(-1.5) μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies erumpent, spreading with moderate aerial mycelium and feathery, lobate margins, covering dish after 1 mo at 25 °C. On OA, MEA and PDA surface olivaceous-grey, reverse iron-grey.Specimen examined. USA, on living leaf of Cornus florida, Jul. 1999, G. Carroll, CBS H-21392, culture CBS 111639.Notes: The name P. cornicola is based on European collections (Cornus sanguinea, Czech Republic), and until fresh European material has been collected, we cannot be sure that the name is authentic for this taxon.Cejp, Bothalia 10: 341. 1971. Fig. 9.
Fig. 9.
Phyllosticta cussoniae (CPC 14873). A. Symptomatic leaf of Cussonia sp. B. Conidiomata forming on PNA. C. Conidiomata sporulating on OA. D, E. Conidiogenous cells giving rise to conidia. F. Conidia. G. Spermatia. Scale bars = 10 μm.
Phyllosticta cussoniae (CPC 14873). A. Symptomatic leaf of Cussonia sp. B. Conidiomata forming on PNA. C. Conidiomata sporulating on OA. D, E. Conidiogenous cells giving rise to conidia. F. Conidia. G. Spermatia. Scale bars = 10 μm.Leaf spots amphigenous, subcircular, pale to medium brown, 0.5-1 cm diam, frequently surrounded by a red-purple margin. Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless to opaque conidial masses; pycnidia up to 200 μm diam; pycnidial wall of several layers of textura angularis; inner wall of hyaline textura angularis. Ostiole central, up to 20 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1-2 supporting cells, branched at base, 10-25 × 3-5 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 5-10 × 3-4 μm; proliferating several times percurrently near apex. Conidia (10-)12-15(-17) × (6-)7(-8) μm, solitary, hyaline, aseptate, thin and smooth walled, coarsely guttulate, or with a single large central guttule, ellipsoid to obovoid, tapering towards a narrow truncate base, 3-4 μm diam, enclosed in a thin, persistent mucoid sheath, 2-4 μm thick, and bearing a hyaline, apical mucoid appendage, (8-)10-12(-13) × 2(-3) μm, flexible, unbranched, tapering towards an acutely rounded tip. Spermatia occurring in same conidioma with conidia, hyaline, smooth, guttulate to granular, bacilliform, 7-10 × 2-3 μm.Culture characteristics: Colonies erumpent, spreading, with sparse aerial mycelium and feathery margins, covering the dish in 1 mo. On MEA surface olivaceous-grey, reverse iron-grey; on OA iron-grey; on PDA iron-grey on surface and reverse.Specimens examined. South Africa, Mpumalanga, Schagen, Nelspruit, on Cussonia umbellifera, 25 Dec. 1933, L.C.C. Liebenberg, holotype PREM 32871; Eastern Cape, Graaff Reinet, Valley of Desolation, on leaf spot of Cussonia sp., 9 Jan. 2008, P.W. Crous (epitype designated here
CBS H-21393, cultures ex-epitype CPC 14874, 14873 = CBS 136060; MBT176246); Gauteng, Walter Sisulu National Botanical Garden, on leaves of Cussonia sp., 2 Mar. 2007, P.W. Crous, cultures CPC 13812-13813.Notes: Phyllosticta cussoniae occurs commonly on various Cussonia spp. throughout South Africa, where it causes a prominent leaf spot disease. All isolates collected from the various provinces where this host occurs, appear to have the same species (based on DNA sequence data) associated with the disease.(Sacc.) Wikee & Crous, comb. nov. MycoBank MB805656. Fig. 10.
Fig. 10.
Phyllosticta foliorum (CBS 447.68). A. Colony sporulating on MEA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.
Phyllosticta foliorum (CBS 447.68). A. Colony sporulating on MEA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.Basionym: Physalospora gregaria var. foliorum Sacc., Syll. fung. (Abellini) 1: 435. 1882.≡ Pyreniella foliorum (Sacc.) Theiss., Annls mycol. 14(6): 411. 1917 (1916).≡ Melanops foliorum (Sacc.) Petr. (as “foliicola”), Kryptogamenflora Forsch. Bayer. Bot. Ges. Erforsch Leim. Flora 2(2): 165. 1931.≡ Botryosphaeria foliorum (Sacc.) Arx & E. Müll., Beitr. Kryptfl. Schweiz 11(no. 1): 42. 1954.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose or with elongated body, exuding colourless to opaque conidial masses; pycnidia up to 400 μm diam; pycnidial wall of several layers of textura angularis; inner wall of hyaline textura angularis. Ostiole central, up to 40 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1-2 supporting cells, branched at base or not, 10-25 × 4-5 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 8-20 × 3-4 μm; proliferating several times percurrently near apex. Conidia (12-)13-14(-15) × (9-)10(-11) μm, solitary, hyaline, aseptate, thin and smooth walled, coarsely guttulate, or with a single large central guttule, broadly ellipsoid, tapering towards a narrow truncate base, 2-3 μm diam, enclosed in a thin, persistent mucoid sheath, 2-3 μm thick, and bearing a hyaline, apical mucoid appendage, (10-)12-15(-20) × 1.5(-2) μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies erumpent, spreading, with sparse aerial mycelium and feathery margins, covering the dish in 1 mo. On MEA surface olivaceous-grey, reverse iron-grey; on OA iron-grey; on PDA iron-grey on surface and reverse.Specimens examined. Italy, on fallen leaves of Taxus baccata, holotype of Physalospora gregaria var. foliorum, Herb. P.A. Saccardo, PAD. Netherlands, Baarn, Maarschalksbos, on dead twigs and needles of Taxus baccata, Sep. 1969, H.A. van der Aa (neotype designated here
CBS H-9495, culture ex-neotype CBS 447.68). USA, from bonsai tree of Cryptomeria japonica, 25 Feb. 1977, G.H. Boerema, specimens CBS H-13111, CBS H-619, culture CBS 174.77.Notes: Guignardia philoprina (from Ilex) is a species complex with numerous old names. The oldest name linked to European specimens from Taxus appears to be Physalospora gregaria var. foliorum, which we recombine in Phyllosticta. As the holotype specimen in PAD only contains immature ascomata and spermatia, a neotype is herewith designated.(Mont.) Allesch., Rabenh. Krypt.-Fl., Edn 2 (Leipzig) 1(6): 163. 1898. Fig. 11.
Fig. 11.
Phyllosticta hypoglossi (CBS 434.92). A. Colony sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.
Phyllosticta hypoglossi (CBS 434.92). A. Colony sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.Basionym: Sphaeropsis hypoglossi Mont., Annls Sci. Nat., Bot., sér. 3 12: 307. 1849.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 200 μm diam; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 15 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1-2 supporting cells, that can be branched at the base, 15-25 × 4-5 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 10-15 × 3-5 μm; proliferating several times percurrently near apex. Conidia (10-)11-12(-14) × (9-)10(-11) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, broadly ellipsoid to obovoid or globose, tapering towards a narrow truncate base, 3-4 μm diam, enclosed in a thin, mucoid sheath, 1-3 μm thick, mostly not persistent, and bearing a hyaline, apical mucoid appendage, (8-)10-12(-15) × 1.5(-2) μm, flexible, unbranched, tapering towards an acute tip.Culture characteristics: Colonies flat, spreading with sparse aerial mycelium and feathery, lobate margins, reaching 25 mm diam on MEA, 30 mm diam on PDA and 35 mm diam on OA after 2 wk at 25 °C. On OA centre olivaceous-grey, outer zone with diffuse pale yellow pigment in agar. On PDA surface olivaceous-grey, reverse iron-grey. On MEA surface iron-grey in centre, pale grey-olivaceous in outer region, iron-grey in reverse.Specimens examined: France, near Marseille, on cladodes of Ruscus hypoglossum, 1845, J.L.M. Castagne, (type not found, presumably missing). Italy, Prov. Napoli, Cratere degli Astroni, on dead cladodes of Ruscus aculeatus, May 1992, W. Gams (neotype designated here
CBS H-5331; ex-neotype culture CBS 434.92; MBT176248).Notes: Judging from the number of specimens and cultures in the CBS collection, P. hypoglossi is a common European species on cladodes of Ruscus hypoglossum. The morphology of the neotype closely matches that described in the original description.Wikee, Motohashi & Crous, sp. nov. MycoBank MB805657. Fig. 12.
Fig. 12.
Phyllosticta leucothoicola (MUCC 553). A. Conidiomata forming on PNA. B. Conidiomata. C, D. Conidiogenous cells giving rise to conidia. E. Conidia. F. Spermatia. Scale bars = 10 μm.
Phyllosticta leucothoicola (MUCC 553). A. Conidiomata forming on PNA. B. Conidiomata. C, D. Conidiogenous cells giving rise to conidia. E. Conidia. F. Spermatia. Scale bars = 10 μm.Etymology: Named after the host genus from which it was collected, Leucothoe.Leaf spots purple-brown, scattered, enlarged and becoming confluent, subcircular to oblong, with brown to dark brown border (Takeuchi & Horie 1998). Conidiomata (on PNA) pycnidial, mostly aggregated in clusters, black, erumpent, globose to clavate or elongated with necks up to 500 μm long, exuding colourless to opaque conidial masses; pycnidia up to 300 μm diam; pycnidial wall of several layers of textura angularis, up to 40 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 15 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, 6-20 × 3-4 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 6-15 × 3-4 μm; proliferating several times percurrently near apex. Conidia (6-)7-8(-9) × 6(-7) μm, solitary, hyaline, aseptate, thin and smooth walled, coarsely guttulate, or with a single large central guttule, ovoid to irregularly ellipsoid, at times enclosed in a thin mucoid sheath, up to 1.5 μm thick; apical mucoid appendage not seen. Spermatia developing in same conidioma as conidia, bacilliform, smooth, hyaline, guttulate, 5-7 × 2-3 μm.Culture characteristics: Colonies erumpent, spreading, with sparse aerial mycelium and feathery margins, covering the dish in 1 mo. On MEA surface olivaceous-grey, reverse iron-grey; on OA iron-grey; on PDA iron-grey on surface and reverse.Specimen examined: Japan, Tokyo, on living leaf of Leucothoe catesbaei, May 1996, J. Takeuchi (holotype CBS H-21394, ex-type culture MUCC 553 = CPC 21881 = CBS 136073).Notes: Phyllosticta leucothoës has been described from Leucothoe acuminata, although van der Aa & Vanev (2002) transferred this to Fusicoccum based on an examination of type material. Phyllosticta leucothoicola represents a distinct taxon on L. catesbaei, corroborating the morphological differences noted by Motohashi et al. (2009).Wikee, Crous, K.D. Hyde & McKenzie, sp. nov. MycoBank MB805657. Fig. 13.
Fig. 13.
Phyllosticta mangifera-indica (CPC 20274). A. Healthy leaf of Mangifera indica. B. Isolation on WA. C. Culture sporulating on OA. D. Culture sporulating on SNA. E. Vertical section through a conidioma showing developing conidia. F-I. Appressoria. J, K. Conidia. L. Culture on MEA. Scale bars: E = 100 μm, F-K = 10 μm.
Phyllosticta mangifera-indica (CPC 20274). A. Healthy leaf of Mangifera indica. B. Isolation on WA. C. Culture sporulating on OA. D. Culture sporulating on SNA. E. Vertical section through a conidioma showing developing conidia. F-I. Appressoria. J, K. Conidia. L. Culture on MEA. Scale bars: E = 100 μm, F-K = 10 μm.Etymology: Named after the host genus on which it occurs, Mangifera indica.Conidiomata pycnidial (on PNA), initially forming after 4 d of incubation, black, superficial, subglobose or ellipsoidal, 220-300 × 160-180 μm; wall of 1-3 layers of brown textura angularis, 20-30 μm thick. Conidiogenous cells lining the inner wall, phialidic, cylindrical, hyaline, 3-5 × 3-4 μm. Conidia ellipsoidal, hyaline, aseptate, smooth, (6-)9(-13) × (4-)5(-6) μm, surrounded by mucilaginous sheath, 0.5-2 μm thick, bearing single apical appendage, 3-14 μm long.Culture characteristics: On OA colonies appeared flat, with irregular margins, initially hyaline with abundant mycelium, gradually becoming greenish after 2-3 d. On MEA, colonies woolly, irregular, initially white with abundant mycelium, gradually becoming greenish to dark green after 2-3 d, with white hyphae at the undulate margin, eventually turning black; reverse dark green to black. After 25 d in the dark at 27 °C colony covering the whole plate. On PDA colonies flat, rather fast growing, initially white with abundant mycelium, gradually becoming greenish to dark green after 2-3 d with white hyphae at the margin, eventually turning black; reverse black and after 14 d in the dark at 27 °C colony covering the whole plate.Specimen examined: Thailand, Chiangrai, Nanglae, on healthy leaf of Mangifera indica, July 2011, S. Wikee (holotype MFU13-0108; ex-type culture CPC 20274 = MFLUCC10-0029 = CBS 136061).Notes: Phyllosticta mangifera-indica was isolated as an endophyte from a healthy leaf of Mangifera indica. Several species have been reported as pathogens on M. indica including G. mangiferae and P. brazilianiae (Glienke ). Phyllosticta mangifera-indica produced abundant conidia on OA and formed appressoria within 2 d. Morphologically, it is distinct from P. capitalensis (conidia 8-11 × 5-6 μm) in having longer conidia (conidia 6-13 × 4-6), and represents a distinct lineage with 99 % bootstrap support with the inclusion of TEF1 and GPDH sequence data. It is phylogenetically distinct from P. mangiferae, and most closely related to P. brazilianiae, which occurs on the same host.(Berk. & M.A. Curtis) Underw. & Earle, Bull. Alabama Agric. Exp. Stn. 80: 168. 1897. Fig. 14.
Fig. 14.
Phyllosticta minima (CBS 585.84). A. Colony sporulating on MEA. B-E. Conidiogenous cells giving rise to conidia. F. Conidia. Scale bars = 10 μm.
Phyllosticta minima (CBS 585.84). A. Colony sporulating on MEA. B-E. Conidiogenous cells giving rise to conidia. F. Conidia. Scale bars = 10 μm.Basionym: Sphaeropsis minima Berk. & M.A. Curtis, N. Amer. Fungi: no. 418. 1874.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 180 μm diam; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 15 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1-2 supporting cells, that can be branched at the base, 15-50 × 5-6 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 8-20 × 3-4 μm; proliferating several times percurrently near apex. Conidia (9-)10-11(-12) × (6-)7(-8) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, broadly ellipsoid to obovoid or globose, tapering towards a narrow truncate base, 2-3 μm diam, enclosed in a thin mucoid sheath, absent at maturity or 1 μm thick, and bearing a hyaline, apical mucoid appendage, 6-7(-10) × 1.5(-2) μm, flexible, unbranched, tapering towards an acute tip.Culture characteristics: Colonies flat, spreading with sparse aerial mycelium and feathery, lobate margins, reaching 15 mm diam on MEA, 40 mm diam on PDA and 8 mm diam on OA after 2 wk at 25 °C. On OA surface olivaceous-grey. On PDA surface and reverse iron-grey. On MEA surface olivaceous-grey with patches of pale luteus.Specimens examined: USA, North Dakota, New England, on Acer rubrum, R. Sprague 5314 (holotype not found); Tennessee, Gatlinburg, Great Smoky Mountains National Park, on leaf spot of Acer rubrum, June 1984, D.H. Defoe (neotype designated here
CBS H-17023; ex-neotype culture CBS 585.84 = IFO 32917; MBT176250).Note: This taxon appears to be common on Acer spp. in the USA, where it is associated with leaf spots (Bissett & Darbyshire 1984). The holotype could not be located in NY, LCR, IMI, S, K or BPI, and thus a neotype (from the original host in the USA) is designated.Wikee, Motohashi, Crous, K.D. Hyde & McKenzie, sp. nov. MycoBank MB803676. Fig. 15.
Fig. 15.
Phyllosticta neopyrolae (CBS 134750). A. Colony sporulating on OA. B-E. Conidiogenous cells giving rise to conidia. F. Conidia. Scale bars = 10 μm.
Phyllosticta neopyrolae (CBS 134750). A. Colony sporulating on OA. B-E. Conidiogenous cells giving rise to conidia. F. Conidia. Scale bars = 10 μm.Etymology: Named after the host genus on which it occurs, Pyrola.Leaf spots orbicular to ellipsoid, black. Conidiomata (on PNA) pycnidial, epiphyllous, sparse, solitary or aggregated, immersed at first, then erumpent breaking through the epidermis, brown to dark brown, subglobose, 60-100 × 60-113 μm; pycnidial wall composed of the depressed or irregular cells in 1-4 layers, brown to dark brown, hyaline or paler toward the inside, with a central ostiole, up to 10 μm diam. Conidiophores subcylindrical, reduced to conidiogenous cells, or with 1-2 supporting cells, branched at the base, 15-20 × 2-3 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 8-15 × 2-3 μm; proliferating several times percurrently near apex. Conidia (6-)7(-8) × (5-)6(-7) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, broadly ellipsoid to globose, mucoid sheath and appendage lacking.Culture characteristics: Colonies erumpent, spreading, with sparse aerial mycelium and feathery margins, covering the dish in 1 mo. On MEA surface olivaceous-grey, reverse iron-grey; on OA iron-grey; on PDA iron-grey on surface and reverse.Specimen examined. Japan, Nagano, Sugadaira, on living leaf of Pyrola asarifolia subsp. incarnata, 17 June 2006, T. Hosoya (holotype TFM: FPH 7887, isotype
CBS H-21395, ex-type culture MUCC 125 = CPC 21879 = CBS 134750).Notes: Two species of Phyllosticta are known from Pyrola spp., namely P. pyrolae Ellis & Everh. and P. pyrolae (Ehrenb.: Fr) Allesch. Of these, the latter species is an illegitimate homonym, with morphological characteristics (conidia 3-4 μm long) that indicate that it should be excluded from Phyllosticta s. str. (van der Aa & Vanev 2002). The other species, P. pyrolae Ellis & Everh. (conidia ovoid to globose, 4.5-7.5 × 4-9 μm, with mucoid layer and an apical appendage) resembles P. neopyrolae. Phyllosticta neopyrolae differs from these two species by having conidia that lack a mucoid sheath and apical appendage.G. Winter, Hedwigia 24: 31. 1885. Fig. 16.
Fig. 16.
Phyllosticta owaniana (CBS 776.97). A. Symptomatic leaf of Brabejum stellatifolium. B. Colony sporulating on OA. C, D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.
Phyllosticta owaniana (CBS 776.97). A. Symptomatic leaf of Brabejum stellatifolium. B. Colony sporulating on OA. C, D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.Leaf spots amphigenous, irregular to subcircular, pale to medium brown, turning greyish with age, surrounded by a broad purplish border, and chlorotic margin. Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 300 μm diam, frequently with elongated neck on OA and MEA; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 10 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1-2 supporting cells, that can be branched at the base, 10-30 × 4-5 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 10-25 × 3-4.5 μm; proliferating several times percurrently near apex. Conidia (10-)11-12(-13) × (7-)8(-9) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, ellipsoid to obovoid, tapering towards a bluntly obtuse or narrow truncate base, 2-3 μm diam, enclosed in a thin persistent mucoid sheath, 1-2 μm thick, and bearing a hyaline, apical mucoid appendage, (5-)8-12(-15) × (1-)1.5 μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies flat, spreading with sparse aerial mycelium and feathery, lobate margins, reaching 30 mm diam on MEA, 40 mm diam on PDA and 25 mm diam on OA after 2 wk at 25 °C. On OA surface iron-grey. On PDA surface and reverse iron-grey. On MEA surface and reverse iron-grey.Specimens examined: South Africa, Western Cape Province, Cape Town, Table Mountain, on leaves of Brabejum stellatifolium, 1884, P. McOwan, holotype in B; Western Cape Province, Jonkershoek Nature Reserve, on leaf spot of Brabejum stellatifolium, 3 Jan. 1995, A. den Breeÿen, (epitype designated here
CBS H-21396, ex-epitype culture CPC 1009 = CBS 776.97; MBT176251).Notes: Phyllosticta owaniana causes a serious leaf spot disease on Brabejum stellatifolium, and is generally found wherever this host occurs in South Africa. All isolates collected thus far (Crous, unpubl. data) are similar based on DNA sequence data, suggesting that it’s a common species on this host.Wikee, Motohashi & Crous, sp. nov. MycoBank MB805658. Fig. 17.
Fig. 17.
Phyllosticta pachysandricola (NBRC 102276). A. Colony sporulating on SNA. B. Colony sporulating on PDA. C. Vertical section through conidioma. D, E. Conidiogenous cells. F. Conidia mounted in lactic acid. G. Conidia mounted in water. Scale bars: C = 35 μm, all others = 10 μm.
Phyllosticta pachysandricola (NBRC 102276). A. Colony sporulating on SNA. B. Colony sporulating on PDA. C. Vertical section through conidioma. D, E. Conidiogenous cells. F. Conidia mounted in lactic acid. G. Conidia mounted in water. Scale bars: C = 35 μm, all others = 10 μm.Etymology: Named after the host genus from which it was collected, Pachysandra.Leaf spots circular to ellipsoid, pale brown to brown, often extend with concentric rings, 6-16 mm diam, surrounded by a dark brown border. Conidiomata (on PNA) pycnidial, amphiphyllous, sparse, solitary or aggregated, immersed at first, then erumpent breaking through the epidermis, brown to dark brown, subglobular, 90-140 × 25-80 μm diam, with central ostiole; pycnidial wall composed of depressed or irregular cells with 1-4 layers, brown to dark brown, hyaline or paler toward the inside. Conidiogenous cells integrated, lining the innermost layer of the pycnidial wall, cylindrical, straight or slightly curved, hyaline, proliferating percurrently at least once, with minute periclinal thickenings, 5-12 × 2-2.5 μm. Conidia sporulating holoblastically, solitary, unicellular, spherical, ellipsoid to obovoid, 5.5-8.5 × 4.5-7.5 μm, truncate at the base or rounded at both ends, containing numerous greenish guttulae, surrounded by a mucous sheath, rarely with a short apical appendage.Specimen examined: Japan, Hokkaido, Asahikawa, on Pachysandra terminalis, K. Motohashi, C. Nakashima & T. Akashi, 7 June 2006 (holotype TFM: FPH7877, isotype MUMH 10488, ex-type culture MUCC 124 = NBRC 102276).Notes: One other species has been recorded from Pachysandra, P. pachysandrae, which van der Aa & Vanev (2002) excluded from Phyllosticta s. str. based on its conidia (unicellular, oblong, 4.5-6 × 1 μm) that indicate placement in Asteromella. The Japanese collection on Pachysandra is thus described as a new species, P. pachysandricola, in accordance to the morphological differences noted by Motohashi et al. (2009).Wikee & Crous, sp. nov. MycoBank MB805659. Fig. 18.
Fig. 18.
Phyllosticta paxistimae (CBS 112527). A. Colony sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.
Phyllosticta paxistimae (CBS 112527). A. Colony sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.Etymology: Named after the host genus from which it was collected, Paxistima.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 200 μm diam; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 10 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, 15-30 × 4-6 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 10-20 × 4-5 μm; proliferating several times percurrently near apex. Conidia (10-)12-14(-16) × 6-7(-8) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, broadly ellipsoid, tapering towards a narrow truncate base, 2-3 μm diam, enclosed in a thin persistent mucoid sheath, 1 μm thick, and bearing a hyaline, apical mucoid appendage, (5-)9-11(-13) × 1.5(-2) μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies erumpent, spreading with moderate aerial mycelium and feathery, lobate margins, reaching 60 mm diam after 1 mo at 25 °C. On OA surface iron-grey with patches of olivaceous-grey. On PDA surface and reverse iron-grey. On MEA surface dirty white with patches of iron-grey, reverse iron-grey.Specimen examined. USA, Oregon, on living leaf of Paxistima myrsinites, 1994, G. Carroll (holotype
CBS H-21397, ex-type culture CBS 112527).Notes: We have been unable to trace the holotype of P. pachystimae (USA, Wyoming, Hoback Canyon, near Granite Creek, on Paxistima myrsinites, 1 Aug. 1940, L.E. Wehmeyer No 1198). The conidia of P. pachystimae (9-14 × 4-5 μm; Wehmeyer 1946) are much narrower than those of P. paxistimae (10-16 × 6-8 μm).(Berk. & M.A. Curtis) Wikee & Crous, comb. nov. MycoBank MB805660.Basionym: Sphaeria philoprina Berk. & M.A. Curtis, Grevillea 4 (32): 154. 1876.≡ Guignardia philoprina (Berk. & M.A. Curtis) Aa, Stud. Mycol. 5: 44. 1973.For additional synonyms see van der Aa (1973).Specimens examined: Spain, on living leaf of Ilex aquifolium, July 1970, H.A. van der Aa, specimen CBS H-13113, culture CBS 587.69. Germany, on Ilex aquifolium, Aug. 1972, R. Schneider, CBS 616.72.Notes: The oldest name for a Phyllosticta sp. occurring on Ilex is Sphaeria philoprina. However, this name was based on material collected in the USA, and the present isolates were derived from European collections.Wikee, Crous, K.D. Hyde & McKenzie, sp. nov. MycoBank MB805661. Fig. 19.
Fig. 19.
Phyllosticta podocarpicola (CBS 728.79). A. Colony sporulating on OA. B. Conidiogenous cells giving rise to conidia. C, D. Conidia. Scale bars = 10 μm.
Phyllosticta podocarpicola (CBS 728.79). A. Colony sporulating on OA. B. Conidiogenous cells giving rise to conidia. C, D. Conidia. Scale bars = 10 μm.Etymology: Named after the host genus from which it was collected, Podocarpus.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless to opaque conidial masses; pycnidia up to 200 μm diam; pycnidial wall of 3-6 layers of brown textura angularis; inner wall of hyaline textura angularis. Ostiole central, up to 20 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1-2 supporting cells, at times branched at base, 10-25 × 4-6 μm. Conidiogenous cells terminal, subcylindrical to doliiform, hyaline, smooth, coated in a mucoid layer, 10-17 × 4-6 μm; proliferating several times percurrently near apex. Conidia 12-13(-16) × 8-9(-9.5) μm, solitary, hyaline, aseptate, thin and smooth walled, coarsely guttulate, or with a single large central guttule, broadly ellipsoid, tapering towards a narrow truncate base, 2-5 μm diam, enclosed in a thin, persistent mucoid sheath, 3-4 μm thick, and bearing a hyaline, apical mucoid appendage, (25-)30-45(-55) × 3-4(-5) μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies after 3 wk reaching 30 mm diam on MEA, 60 mm on PDA and OA. Colonies flattened, spreading, with sparse aerial mycelium and feathery margins. On MEA surface and reverse olivaceous-grey; on OA olivaceous-grey; on PDA iron-grey on surface and reverse.Specimen examined: USA, Florida, on seed of Podocarpus maki (intercepted in New Zealand), Sep. 1979, G. Laundon (holotype
CBS H-13109; ex-type culture CBS 728.79).Notes: The isolate described here as Phyllosticta podocarpicola (CBS 728.79) was originally treated as part of the G. philoprina species complex, from which it is phylogenetically distinct (Figs 1, 2). It is also distinct from Phyllosticta podocarpi, which was originally described from Podocarpus elongatus leaf litter collected in South Africa [conidia (10-)14(-17) × (8-)9(-10) μm, appendages 10-40 × 1.5-2 μm; Crous ].Wikee, C. Nakash. & Crous, sp. nov. MycoBank MB805662. Fig. 20.
Fig. 20.
Phyllosticta rhaphiolepidis (MUCC 432). A, B. Close-up of immersed conidiomata on leaf tissue. C. Vertical section through conidioma. D. Conidiomatal wall of textura angularis. E, F. Conidiogenous cells. G. Conidia. Scale bars: C = 25 μm, all others = 10 μm.
Phyllosticta rhaphiolepidis (MUCC 432). A, B. Close-up of immersed conidiomata on leaf tissue. C. Vertical section through conidioma. D. Conidiomatal wall of textura angularis. E, F. Conidiogenous cells. G. Conidia. Scale bars: C = 25 μm, all others = 10 μm.Etymology: Named after the host genus from which it was collected, Rhaphiolepis.Leaf spots irregular, pale brown. Conidiomata (on PDA) pycnidial, amphiphyllous, immersed, subglobose to globose, composed of depressed or irregular cells in 2-3 layers, dark brown to black, hyaline or paler toward the inside, 85-175 × 100-110 μm diam, with central ostiole, 10-13 μm diam. Conidiogenous cells integrated, lining the inner layer of pycnidia, hyaline, lageniform, cylindrical or conical, 3-10 × 3-4 μm, proliferating percurrently near apex. Conidia unicellular, spherical, ellipsoid to obovoid, truncate at base, later rounded at both ends, surrounded by a mucoid layer, containing numerous minute guttules, 7.5-10 × 4.6-6 μm, with a slender and short apical appendage 4-6 × 1-2 μm.Specimen examined: Japan, Kagoshima, Tokunoshima Is., on living leaf of Rhaphiolepis indica var. umbellata, T. Kobayashi & Y. Ono, 22 Oct. 2003 (holotype
CBS H-21408, culture ex-type MUCC 432).Notes: Phyllosticta rhaphiolepicola, which occurs on Rhaphiolepis japonica in Germany, has somewhat wider conidia (7-9 × 6-8 μm; van der Aa & Vanev 2002) than the Japanese collection. Phyllosticta rhaphiolepidis is also phylogenetically distinct from other species of Phyllosticta that have been deposited in GenBank (Figs 1, 2).Wikee & Crous, sp. nov. MycoBank MB805663. Fig. 21.
Fig. 21.
Phyllosticta rubra (CBS 111635). A. Conidiomata forming on PNA. B. Asci with ascospores. C, D. Conidiogenous cells. E. Conidia. Scale bars = 10 μm.
Phyllosticta rubra (CBS 111635). A. Conidiomata forming on PNA. B. Asci with ascospores. C, D. Conidiogenous cells. E. Conidia. Scale bars = 10 μm.Etymology. Named after the host species from which it was collected, Acer rubrum.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 200 μm diam; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 15 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, that can be branched at the base, 7-10 × 2-3 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 3-8 × 2-3 μm; proliferating several times percurrently near apex. Conidia (6-)6.5-7(-8) × (4-)5(-5.5) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, ellipsoid to obovoid, tapering towards a narrow truncate base, 1.5-2 μm diam, enclosed in a thin persistent mucoid sheath, 1-1.5 μm thick, and bearing a hyaline, apical mucoid appendage, (5-)6-7(-9) × (1-)1.5 μm, flexible, unbranched, tapering towards an acutely rounded tip. Ascomata similar to conidiomata in general anatomy. Asci bitunicate, hyaline, clavate to broadly fusoid-ellipsoid, with visible apical chamber, 1 μm diam, 30-50 × 10-12 μm. Ascospores bi- to triseriate, hyaline, smooth, granular to guttulate, aseptate, straight, rarely curved, widest in the upper third, limoniform, (8-)9-10(-12) × (4-)5 μm.Culture characteristics: Colonies erumpent, spreading with moderate aerial mycelium, covering dish after 1 mo at 25 °C. On OA surface iron-grey. On PDA and MEA surface olivaceous-grey, to iron-grey, reverse iron-grey.Specimen examined: USA, Missouri, on Acer rubrum, July 1999, G. Carroll, (holotype
CBS H-21398, culture ex-type CBS 111635).Notes: Phyllosticta rubra is part of the P. minima species complex. Phyllosticta rubra has larger conidia (10 μm long), than two proposed synonyms, namely P. arida (on Acer negundo, conidia 8-10 × 6-7 μm), and P. acericola (on Acer rubrum, conidia 5-8 × 3-3.5 μm) (see van der Aa 1973).(Died.) Nag Raj & M. Morelet, Bull. Soc. Sci. nat. Arch. Toulon et du Var 34 (219): 12. 1978. Fig. 22.
Fig. 22.
Phyllosticta spinarum (CBS 292.90). A, B. Colony sporulating on SNA. C, D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.
Phyllosticta spinarum (CBS 292.90). A, B. Colony sporulating on SNA. C, D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.Basionym: Phoma spinarum Died., Krypt.-Fl. Brandenburg (Leipzig) 9: 148. 1912.Conidiomata (on PNA) pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 200 μm diam; pycnidial wall of several layers of textura angularis, up to 30 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 15 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, that can be branched at the base, 10-15 × 4-5 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 5-12 × 3-5 μm; proliferating several times percurrently near apex. Conidia (10-)12-14(-15) × (7-)7.5(-8) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, or with a single large central guttule, ellipsoid to obovoid, tapering towards a narrow truncate base, 3-4 μm diam, enclosed in a thin persistent mucoid sheath, 1-2 μm thick, and bearing a hyaline, apical mucoid appendage, (7-)8-12(-20) × (2-)2.5(-3) μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies flat, spreading with sparse aerial mycelium and feathery, lobate margins, reaching 70 mm diam after 1 mo at 25 °C. On OA surface olivaceous-grey. On PDA surface olivaceous-grey, reverse iron-grey. On MEA surface pale olivaceous-grey in outer region, olivaceous-grey in centre; in reverse iron-grey in centre, smoke-grey in outer region.Specimens examined: France, St. Denis en Val, on living leaf of Chamaecyparis pisifera, 1970, M. Morelet (CBS H-17034, culture CBS 292.90). Germany, Nieder Lauslitz: Colbus, on Juniperus sp., 4 Jul. 1910, Diedicke, holotype in B.Notes: Nag Raj & Morelet (1979) provide a detailed description of the type specimen, which closely corresponds with isolate CBS 292.90 studied here.Wikee, Crous, K.D. Hyde & McKenzie, sp. nov. MycoBank MB805664. Fig. 23.
Fig. 23.
Phyllosticta vacciniicola (CPC 18590). A. Colony sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.
Phyllosticta vacciniicola (CPC 18590). A. Colony sporulating on OA. B-D. Conidiogenous cells giving rise to conidia. E, F. Conidia. Scale bars = 10 μm.Conidiomata pycnidial, solitary, black, erumpent, globose, exuding colourless conidial masses; pycnidia up to 200 μm diam; pycnidial wall of several layers of textura angularis, up to 25 μm thick; inner wall of hyaline textura angularis. Ostiole central, up to 20 μm diam. Conidiophores subcylindrical to ampulliform, reduced to conidiogenous cells, or with 1 supporting cell, that can be branched at the base, 10-20 × 3-5 μm. Conidiogenous cells terminal, subcylindrical, hyaline, smooth, coated in a mucoid layer, 8-15 × 3-4 μm; proliferating several times percurrently near apex. Conidia (9-)10-12(-13) × (6-)7(-8) μm, solitary, hyaline, aseptate, thin and smooth walled, granular, with a single large central guttule, ellipsoid to obovoid, tapering towards a narrow truncate base, 3-4 μm diam, enclosed in a thin persistent mucoid sheath, 0.5-1 μm thick, and bearing a hyaline, apical mucoid appendage, 7-25 × (1.5-)2 μm, flexible, unbranched, tapering towards an acutely rounded tip.Culture characteristics: Colonies flat, spreading with sparse aerial mycelium and feathery, lobate margins, reaching 15 mm diam after 2 wk at 25 °C. On OA surface iron-grey. On PDA surface and reverse iron-grey. On MEA surface pale olivaceous-grey to olivaceous-grey, reverse olivaceous-grey.Specimen examined: USA, on living leaf of Vaccinium macrocarpum, Mariusz Tadych, (holotype
CBS H-21399, ex-type culture CPC 18590 = CBS 136062).Notes: A recent study published by Zhang et al. (2013) revealed P. vaccinii (ex-epitype ATCC 46255) to be distinct from Guignardia vaccinii (ex-holotype CBS 126.22), and also revealed that several undescribed Phyllosticta spp. are associated with Vaccinium, one of which is described here as P. vacciniicola. The correct name for G. vaccinii should thus be that of its asexual morph P. elongata, in accordance with Weidemann et al. (1982).Specimen examined: Spain, on living leaf of Eucalyptus globulus, 4 Jan. 2004, M.J. Wingfield, culture CPC 11336.Notes: Two species of Phyllosticta are known from Eucalyptus. Van der Aa & Vanev (2002) treated P. eucalyptorum (on E. grandis from Brazil, conidia (7.5-)11-20 × (5-6(-6.5) μm; Crous ) as synonymous with P. eucalyptina (on E. globulus, Tunisia, conidia 18-20 × 5-6 μm). No cultures of P. eucalyptina are available, and P. eucalyptorum was considered a synonym of P. capitalensis (Fig. 1). Although the present collection appears to represent a novel species, it is not treated further as the cultures proved to be sterile.Specimens examined: Brazil, São Paulo, Pompeia, on living leaf of Mangifera indica, 14 May 2007, C. Glienke & D. Stringari CPC 17454; ibid., CPC 17455.Notes: Although phylogenetically distinct (Fig. 2), both cultures of this species proved to be sterile, and thus are not treated further.
DISCUSSION
The resurrection of the Phyllostictaceae, and its separation from the Botryosphaeriaceae is justified based on morphology and DNA phylogeny (Crous , Liu , Slippers , this volume). Phyllosticta is a well-established genus, distinct from genera in the Phoma complex (Aveskamp , de Gruyter et al. 2009, 2012, 2013), while the Botryosphaeria complex has also been shown to represent numerous genera (Crous , Phillips , Liu ), and even families (Slippers , this volume).Traditionally species of Phyllosticta have been chiefly identified by their host association. Several recent papers have shown that many traditional morphological species represent complexes of species, e.g. P. citricarpa on citrus, P. musarum on banana (Glienke , Wang ), and P. elongata on Vaccinium (Zhang ).Freckle disease of banana was usually referred to in literature under its sexual name, Guignardia musae, or that of its purported asexual morph, Phyllosticta musarum. By employing multigene DNA analysis combined with a morphological comparison, Wong et al. (2012) demonstrated that these two names were not conspecific, and that the the common species occurring on banana cultivar Cavendish was in fact a novel taxon, which they described as P. cavendishii. The commonly occurring species in Southeast Asia and Oceania on non-Cavendish bananas was in fact another taxon, P. maculata. A third species on bananas, P. musarum was confirmed from India and Thailand. The most recent studies focusing on the taxonomy of Phyllosticta species associated with citrus black spot is that of Glienke et al. (2011) and Wang et al. (2012). Surprisingly, several species of Phyllosticta were shown to cause these symptoms on Citrus, although there was a difference in their host range and preference. The citrus black spot pathogen which is presently subjected to phytosanitary legislation in the EU and United States, P. citricarpa, was isolated from lemons, mandarins and oranges in China, although Wang et al. (2012) did define two subclades, one from mandarins, and another from oranges and lemons. Phyllosticta citriasiana was newly described on Citrus maxima in Asia by Wulandari et al. (2009), while Glienke et al. (2011) described P. citribraziliensis on Citrus limon from Brazil. Wang et al. (2012) also described P. citrichinaensis on C. maxima and C. reticulata from China. The present study adds yet a fifth species to this complex, namely P. citrimaxima, which is associated with tan spots on the fruit rind of Citrus maxima in Thailand. When considering that P. capitalensis can still co-occur as an endophyte in fruit or leaf lesions caused by these five species (Wikee ), it is clear that these taxa are best distinguished by DNA sequence data. This has important biosecurity implications for the Citrus industries in many countries.Guignardia philoprina (asexual morph P. concentrica) has been known as the taxon occurring on hosts such as Rhododendron, Hedera, Ilex, Magnolia, and Taxus (von Arx & Müller 1954). Not surprisingly, this turned out to represent a species complex, with numerous names available for consideration under the sexual and asexual morph. Although some of these names have been resurrected and applied in the present study, e.g. P. concentrica on Hedera helix, P. foliorum on Taxus, and P. philoprina on Ilex, many taxa still need to be recollected to resolve their phylogeny and correct taxonomy.One aim of the present paper was to employ multigene DNA sequence analysis to discriminate among all species of Phyllosticta that were available to us from the CBS culture collection, supplemented by our own working collections, which resulted in a total of 160 strains. In addition to dealing with old synonymies that represented names that had to be resurrected, a further challenge has been to also merge Phyllosticta and Guignardia epithets, to obtain the best possible unit nomenclature for these species (Wingfield ). In the present study we described 12 novel species, and designated a further eight epitype or neotype specimens. From the results obtained here, it is clear that in the case of epitypification, epitypes need to be designated based on the same host, recollected in the same geographic region (see Cannon ). This is extremely difficult, as American names are commonly used for European of Asian taxa, and also vice versa (see the same situation in Cercospora and Pseudocercospora; Crous , Groenewald ). In these cases the application of names to collections from other countries that appear morphologically similar, can at best be regarded as tentative, pending further collections.Results obtained here clearly show that a multi-gene approach works well for distinguishing these taxa. In this study the intron dominated genes (ITS, ACT, TEF), and highly conserved gene coding regions (LSU, GPDH) were used. The result from the five gene analysis compared with the two gene analysis were similar (Figs 1, 2), indicating that the phylogeny of Phyllosticta derived from the ITS and ACT gene loci is sufficiently robust to distinguish most taxa, except those closely related to P. capitalensis. The biggest challenge ahead is to recollect specimens representative of the more than 3 000 names that exist in this complex.
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