Literature DB >> 35935886

Evaluating species in Botryosphaeriales.

W Zhang1, J Z Groenewald2, L Lombard2, R K Schumacher3, A J L Phillips4, P W Crous2,5.   

Abstract

The Botryosphaeriales (Dothideomycetes) includes numerous endophytic, saprobic, and plant pathogenic species associated with a wide range of symptoms, most commonly on woody plants. In a recent phylogenetic treatment of 499 isolates in the culture collection (CBS) of the Westerdijk Institute, we evaluated the families and genera accommodated in this order of important fungi. The present study presents multigene phylogenetic analyses for an additional 230 isolates, using ITS, tef1, tub2, LSU and rpb2 loci, in combination with morphological data. Based on these data, 58 species are reduced to synonymy, and eight novel species are described. They include Diplodia afrocarpi (Afrocarpus, South Africa), Dothiorella diospyricola (Diospyros, South Africa), Lasiodiplodia acaciae (Acacia, Indonesia), Neofusicoccum podocarpi (Podocarpus, South Africa), N. rapaneae (Rapanea, South Africa), Phaeobotryon ulmi (Ulmus, Germany), Saccharata grevilleae (Grevillea, Australia) and S. hakeiphila (Hakea, Australia). The results have clarified the identity of numerous isolates that lacked Latin binomials or had been deposited under incorrect names in the CBS collection in the past. They also provide a solid foundation for more in-depth future studies on taxa in the order. Sequences of the tef1, tub2 and rpb2 genes proved to be the most reliable markers. At the species level, results showed that the most informative genes were inconsistent, but that a combination of four candidate barcodes (ITS, tef1, tub2 and rpb2) provided reliable resolution. Furthermore, given the large number of additional isolates included in this study, and newly generated multigene DNA datasets, several species could also be reduced to synonymy. The study illustrates the value of reassessing the identity of older collections in culture collections utilising modern taxonomic frameworks and methods. Citation: Zhang W, Groenewald JZ, Lombard L, et al. 2021. Evaluating species in Botryosphaeriales. Persoonia 46: 63-115. https://doi.org/10.3767/persoonia.2021.46.03.
© 2021 Naturalis Biodiversity Center & Westerdijk Fungal Biodiversity Institute.

Entities:  

Keywords:  Multi-Locus Sequence Typing (MLST); canker and leaf spot pathogens; new taxa; systematics

Year:  2021        PMID: 35935886      PMCID: PMC9311389          DOI: 10.3767/persoonia.2021.46.03

Source DB:  PubMed          Journal:  Persoonia        ISSN: 0031-5850            Impact factor:   11.658


  41 in total

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Review 5.  Diversity in the Botryosphaeriales: Looking back, looking forward.

Authors:  Bernard Slippers; Pedro Willem Crous; Fahimeh Jami; Johannes Zacharias Groenewald; Michael John Wingfield
Journal:  Fungal Biol       Date:  2017-02-27

6.  Families, genera, and species of Botryosphaeriales.

Authors:  Tao Yang; Johannes Z Groenewald; Ratchadawan Cheewangkoon; Fahimeh Jami; Jafar Abdollahzadeh; Lorenzo Lombard; Pedro W Crous
Journal:  Fungal Biol       Date:  2016-11-21

7.  Novel species of Botryosphaeriaceae associated with shoot blight of pistachio.

Authors:  ShuaiFei Chen; GuoQing Li; FeiFei Liu; Themis J Michailides
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8.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

9.  Botryosphaeriaceae from Eucalyptus plantations and adjacent plants in China.

Authors:  G Q Li; F F Liu; J Q Li; Q L Liu; S F Chen
Journal:  Persoonia       Date:  2017-10-31       Impact factor: 11.051

10.  Lasiodiplodia syzygii sp. nov. (Botryosphaeriaceae) causing post-harvest water-soaked brown lesions on Syzygium samarangense in Chiang Rai, Thailand.

Authors:  Chao-Rong Meng; Qian Zhang; Zai-Fu Yang; Kun Geng; Xiang-Yu Zeng; K W Thilini Chethana; Yong Wang
Journal:  Biodivers Data J       Date:  2021-01-07
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  1 in total

1.  Lasiodiplodia fici sp. nov., Causing Leaf Spot on Ficus altissima in China.

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  1 in total

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