Literature DB >> 24284177

Linear aggregation of proteins on the membrane as a prelude to membrane remodeling.

Mijo Simunovic1, Anand Srivastava, Gregory A Voth.   

Abstract

Adhesion and insertion of curvature-mediating proteins can induce dramatic structural changes in cell membranes, allowing them to participate in several key cellular tasks. The way proteins interact to generate curvature remains largely unclear, especially at early stages of membrane remodeling. Using a coarse-grained model of Bin/amphiphysin/Rvs domain with an N-terminal helix (N-BAR) interacting with flat membranes and vesicles, we demonstrate that at low protein surface densities, binding of N-BAR domain proteins to the membrane is followed by a linear aggregation and the formation of meshes on the surface. In this process, the proteins assemble at the base of emerging membrane buds. Our work shows that beyond a more straightforward scaffolding mechanism at high bound densities, the interplay of anisotropic interactions and the local stress imposed by the N-BAR proteins results in deep invaginations and endocytic vesicular bud-like deformations, an order of magnitude larger than the size of the individual protein. Our results imply that by virtue of this mechanism, cell membranes may achieve rapid local increases in protein concentration.

Entities:  

Keywords:  Gaussian curvature; coarse-grained simulation; membrane curvature; membrane stress; self-assembly

Mesh:

Substances:

Year:  2013        PMID: 24284177      PMCID: PMC3870675          DOI: 10.1073/pnas.1309819110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles.

Authors:  Anđela Sarić; Angelo Cacciuto
Journal:  Phys Rev Lett       Date:  2012-03-14       Impact factor: 9.161

2.  Nonlinear sorting, curvature generation, and crowding of endophilin N-BAR on tubular membranes.

Authors:  Chen Zhu; Sovan L Das; Tobias Baumgart
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

Review 3.  Membrane curvature and mechanisms of dynamic cell membrane remodelling.

Authors:  Harvey T McMahon; Jennifer L Gallop
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

4.  The BAR domain superfamily: membrane-molding macromolecules.

Authors:  Adam Frost; Vinzenz M Unger; Pietro De Camilli
Journal:  Cell       Date:  2009-04-17       Impact factor: 41.582

5.  Membrane bending by protein-protein crowding.

Authors:  Jeanne C Stachowiak; Eva M Schmid; Christopher J Ryan; Hyoung Sook Ann; Darryl Y Sasaki; Michael B Sherman; Phillip L Geissler; Daniel A Fletcher; Carl C Hayden
Journal:  Nat Cell Biol       Date:  2012-08-19       Impact factor: 28.824

6.  FCHo proteins are nucleators of clathrin-mediated endocytosis.

Authors:  William Mike Henne; Emmanuel Boucrot; Michael Meinecke; Emma Evergren; Yvonne Vallis; Rohit Mittal; Harvey T McMahon
Journal:  Science       Date:  2010-05-06       Impact factor: 47.728

Review 7.  Roles of bilayer material properties in function and distribution of membrane proteins.

Authors:  Thomas J McIntosh; Sidney A Simon
Journal:  Annu Rev Biophys Biomol Struct       Date:  2006

8.  A Hybrid Approach for Highly Coarse-grained Lipid Bilayer Models.

Authors:  Anand Srivastava; Gregory A Voth
Journal:  J Chem Theory Comput       Date:  2013-01-08       Impact factor: 6.006

9.  The multiscale coarse-graining method. I. A rigorous bridge between atomistic and coarse-grained models.

Authors:  W G Noid; Jhih-Wei Chu; Gary S Ayton; Vinod Krishna; Sergei Izvekov; Gregory A Voth; Avisek Das; Hans C Andersen
Journal:  J Chem Phys       Date:  2008-06-28       Impact factor: 3.488

10.  Membrane fission is promoted by insertion of amphipathic helices and is restricted by crescent BAR domains.

Authors:  Emmanuel Boucrot; Adi Pick; Gamze Çamdere; Nicole Liska; Emma Evergren; Harvey T McMahon; Michael M Kozlov
Journal:  Cell       Date:  2012-03-30       Impact factor: 41.582

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  54 in total

1.  Application of a free-energy-landscape approach to study tension-dependent bilayer tubulation mediated by curvature-inducing proteins.

Authors:  Richard W Tourdot; N Ramakrishnan; Tobias Baumgart; Ravi Radhakrishnan
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-10-29

2.  A Model for Shaping Membrane Sheets by Protein Scaffolds.

Authors:  Yonatan Schweitzer; Tom Shemesh; Michael M Kozlov
Journal:  Biophys J       Date:  2015-08-04       Impact factor: 4.033

3.  N-terminal amphipathic helix of Amphiphysin can change the spatial distribution of immunoglobulin E receptors (FcεRI) in the RBL-2H3 mast cell synapse.

Authors:  Kathrin Spendier
Journal:  Results Immunol       Date:  2015-12-03

Review 4.  The Unsolved Problem of How Cells Sense Micron-Scale Curvature.

Authors:  Kevin S Cannon; Benjamin L Woods; Amy S Gladfelter
Journal:  Trends Biochem Sci       Date:  2017-10-28       Impact factor: 13.807

Review 5.  Building endocytic pits without clathrin.

Authors:  Ludger Johannes; Robert G Parton; Patricia Bassereau; Satyajit Mayor
Journal:  Nat Rev Mol Cell Biol       Date:  2015-04-10       Impact factor: 94.444

6.  Cellular Blebs and Membrane Invaginations Are Coupled through Membrane Tension Buffering.

Authors:  Ido Lavi; Mohammad Goudarzi; Erez Raz; Nir S Gov; Raphael Voituriez; Pierre Sens
Journal:  Biophys J       Date:  2019-08-09       Impact factor: 4.033

7.  Membrane Morphologies Induced by Arc-Shaped Scaffolds Are Determined by Arc Angle and Coverage.

Authors:  Francesco Bonazzi; Thomas R Weikl
Journal:  Biophys J       Date:  2019-02-26       Impact factor: 4.033

8.  Multipole analysis of the strain-mediated coupling between proteins adsorbed at tubular lipid membrane surface.

Authors:  I Yu Golushko; S B Rochal; V L Lorman
Journal:  Eur Phys J E Soft Matter       Date:  2016-12-22       Impact factor: 1.890

Review 9.  Dynamics and instabilities of lipid bilayer membrane shapes.

Authors:  Zheng Shi; Tobias Baumgart
Journal:  Adv Colloid Interface Sci       Date:  2014-01-25       Impact factor: 12.984

Review 10.  Membrane remodeling and mechanics: Experiments and simulations of α-Synuclein.

Authors:  Ana West; Benjamin E Brummel; Anthony R Braun; Elizabeth Rhoades; Jonathan N Sachs
Journal:  Biochim Biophys Acta       Date:  2016-03-10
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