Literature DB >> 26244738

A Model for Shaping Membrane Sheets by Protein Scaffolds.

Yonatan Schweitzer1, Tom Shemesh2, Michael M Kozlov3.   

Abstract

Membranes of peripheral endoplasmic reticulum form intricate morphologies consisting of tubules and sheets as basic elements. The physical mechanism of endoplasmic-reticulum shaping has been suggested to originate from the elastic behavior of the sheet edges formed by linear arrays of oligomeric protein scaffolds. The heart of this mechanism, lying in the relationships between the structure of the protein scaffolds and the effective intrinsic shapes and elastic properties of the sheets' edges, has remained hypothetical. Here we provide a detailed computational analysis of these issues. By minimizing the elastic energy of membrane bending, we determine the effects of a rowlike array of semicircular arclike membrane scaffolds on generation of a membrane fold, which shapes the entire membrane surface into a flat double-membrane sheet. We show, quantitatively, that the sheet's edge line tends to adopt a positive or negative curvature depending on the scaffold's geometrical parameters. We compute the effective elastic properties of the sheet edge and analyze the dependence of the equilibrium distance between the scaffolds along the edge line on the scaffold geometry.
Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26244738      PMCID: PMC4572493          DOI: 10.1016/j.bpj.2015.06.001

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  36 in total

Review 1.  Modeling membrane shaping by proteins: focus on EHD2 and N-BAR domains.

Authors:  Felix Campelo; Gur Fabrikant; Harvey T McMahon; Michael M Kozlov
Journal:  FEBS Lett       Date:  2009-10-16       Impact factor: 4.124

2.  Membrane-mediated aggregation of curvature-inducing nematogens and membrane tubulation.

Authors:  N Ramakrishnan; P B Sunil Kumar; John H Ipsen
Journal:  Biophys J       Date:  2013-03-05       Impact factor: 4.033

Review 3.  Mechanisms shaping the membranes of cellular organelles.

Authors:  Yoko Shibata; Junjie Hu; Michael M Kozlov; Tom A Rapoport
Journal:  Annu Rev Cell Dev Biol       Date:  2009       Impact factor: 13.827

4.  Homotypic fusion of ER membranes requires the dynamin-like GTPase atlastin.

Authors:  Genny Orso; Diana Pendin; Song Liu; Jessica Tosetto; Tyler J Moss; Joseph E Faust; Massimo Micaroni; Anastasia Egorova; Andrea Martinuzzi; James A McNew; Andrea Daga
Journal:  Nature       Date:  2009-07-26       Impact factor: 49.962

5.  The hydrophobic insertion mechanism of membrane curvature generation by proteins.

Authors:  Felix Campelo; Harvey T McMahon; Michael M Kozlov
Journal:  Biophys J       Date:  2008-05-30       Impact factor: 4.033

6.  Mechanisms determining the morphology of the peripheral ER.

Authors:  Yoko Shibata; Tom Shemesh; William A Prinz; Alexander F Palazzo; Michael M Kozlov; Tom A Rapoport
Journal:  Cell       Date:  2010-11-24       Impact factor: 41.582

Review 7.  The ER in 3D: a multifunctional dynamic membrane network.

Authors:  Jonathan R Friedman; Gia K Voeltz
Journal:  Trends Cell Biol       Date:  2011-09-06       Impact factor: 20.808

8.  How synaptotagmin promotes membrane fusion.

Authors:  Sascha Martens; Michael M Kozlov; Harvey T McMahon
Journal:  Science       Date:  2007-05-03       Impact factor: 47.728

9.  ER network formation requires a balance of the dynamin-like GTPase Sey1p and the Lunapark family member Lnp1p.

Authors:  Shuliang Chen; Peter Novick; Susan Ferro-Novick
Journal:  Nat Cell Biol       Date:  2012-06-24       Impact factor: 28.824

10.  Stacked endoplasmic reticulum sheets are connected by helicoidal membrane motifs.

Authors:  Mark Terasaki; Tom Shemesh; Narayanan Kasthuri; Robin W Klemm; Richard Schalek; Kenneth J Hayworth; Arthur R Hand; Maya Yankova; Greg Huber; Jeff W Lichtman; Tom A Rapoport; Michael M Kozlov
Journal:  Cell       Date:  2013-07-18       Impact factor: 41.582

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  11 in total

1.  Interplay between Membrane Curvature and Cholesterol: Role of Palmitoylated Caveolin-1.

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Journal:  Biophys J       Date:  2018-12-01       Impact factor: 4.033

2.  Cellular Blebs and Membrane Invaginations Are Coupled through Membrane Tension Buffering.

Authors:  Ido Lavi; Mohammad Goudarzi; Erez Raz; Nir S Gov; Raphael Voituriez; Pierre Sens
Journal:  Biophys J       Date:  2019-08-09       Impact factor: 4.033

3.  Membrane Morphologies Induced by Arc-Shaped Scaffolds Are Determined by Arc Angle and Coverage.

Authors:  Francesco Bonazzi; Thomas R Weikl
Journal:  Biophys J       Date:  2019-02-26       Impact factor: 4.033

4.  Physical Model for Stabilization and Repair of Trans-endothelial Apertures.

Authors:  Eduard G Fedorov; Tom Shemesh
Journal:  Biophys J       Date:  2017-01-24       Impact factor: 4.033

5.  Spontaneous local membrane curvature induced by transmembrane proteins.

Authors:  Christoph Kluge; Matthias Pöhnl; Rainer A Böckmann
Journal:  Biophys J       Date:  2022-02-03       Impact factor: 4.033

Review 6.  Lipid Droplet Biogenesis.

Authors:  Tobias C Walther; Jeeyun Chung; Robert V Farese
Journal:  Annu Rev Cell Dev Biol       Date:  2017-08-09       Impact factor: 13.827

7.  Transmembrane Domain Lengths Serve as Signatures of Organismal Complexity and Viral Transport Mechanisms.

Authors:  Snigdha Singh; Aditya Mittal
Journal:  Sci Rep       Date:  2016-03-01       Impact factor: 4.379

Review 8.  Plant ER geometry and dynamics: biophysical and cytoskeletal control during growth and biotic response.

Authors:  Lawrence R Griffing; Congping Lin; Chiara Perico; Rhiannon R White; Imogen Sparkes
Journal:  Protoplasma       Date:  2016-02-10       Impact factor: 3.356

9.  A Multi-Scale Approach to Membrane Remodeling Processes.

Authors:  Weria Pezeshkian; Melanie König; Siewert J Marrink; John H Ipsen
Journal:  Front Mol Biosci       Date:  2019-07-23

10.  Curvature sensing amphipathic helix in the C-terminus of RTNLB13 is conserved in all endoplasmic reticulum shaping reticulons in Arabidopsis thaliana.

Authors:  Rhiannon L Brooks; Chandni S Mistry; Ann M Dixon
Journal:  Sci Rep       Date:  2021-03-18       Impact factor: 4.379

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