Literature DB >> 24269950

Cobalamin-dependent dehydratases and a deaminase: radical catalysis and reactivating chaperones.

Tetsuo Toraya1.   

Abstract

Adenosylcobalamin, a coenzyme form of vitamin B12, is an organometallic compound that participates in about ten enzymatic reactions. These enzymes catalyze chemically challenging reactions by using a highly reactive primary carbon radical that is derived from homolysis of the coenzyme Co-C bond. Among them, diol dehydratases and ethanolamine ammonia-lyase have been most extensively studied to establish the general mechanism of adenosylcobalamin-assisted enzymatic catalysis and radical-catalyzed reactions. Another important point is that adenosylcobalamin-dependent radical enzymes are prone to mechanism-based irreversible inactivation during catalysis and have their own chaperones for the maintenance of catalytic activities. This review will highlight biochemical, structural, and computational studies with special emphases on radical catalysis and reactivating chaperones of these enzymes.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Adenosylcobalamin; Chaperone; Cobalamin; Coenzyme B(12); Radical enzyme; Reactivase

Mesh:

Substances:

Year:  2013        PMID: 24269950     DOI: 10.1016/j.abb.2013.11.002

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  15 in total

1.  Structural Basis for Substrate Specificity in Adenosylcobalamin-dependent Isobutyryl-CoA Mutase and Related Acyl-CoA Mutases.

Authors:  Marco Jost; David A Born; Valentin Cracan; Ruma Banerjee; Catherine L Drennan
Journal:  J Biol Chem       Date:  2015-08-28       Impact factor: 5.157

2.  C3'-Deoxygenation of Paromamine Catalyzed by a Radical S-Adenosylmethionine Enzyme: Characterization of the Enzyme AprD4 and Its Reductase Partner AprD3.

Authors:  Hak Joong Kim; Jake LeVieux; Yu-Cheng Yeh; Hung-Wen Liu
Journal:  Angew Chem Int Ed Engl       Date:  2016-02-16       Impact factor: 15.336

3.  Visualization of a radical B12 enzyme with its G-protein chaperone.

Authors:  Marco Jost; Valentin Cracan; Paul A Hubbard; Ruma Banerjee; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-09       Impact factor: 11.205

4.  Mechanistic Investigation of the Radical S-Adenosyl-L-methionine Enzyme DesII Using Fluorinated Analogues.

Authors:  Geng-Min Lin; Sei-Hyun Choi; Mark W Ruszczycky; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2015-04-02       Impact factor: 15.419

Review 5.  Prokaryotic Organelles: Bacterial Microcompartments in E. coli and Salmonella.

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Journal:  EcoSal Plus       Date:  2020-10

6.  Engineered and Native Coenzyme B12-dependent Isovaleryl-CoA/Pivalyl-CoA Mutase.

Authors:  Kenichi Kitanishi; Valentin Cracan; Ruma Banerjee
Journal:  J Biol Chem       Date:  2015-07-01       Impact factor: 5.157

7.  Resonance Raman spectroscopic study of the interaction between Co(II)rrinoids and the ATP:corrinoid adenosyltransferase PduO from Lactobacillus reuteri.

Authors:  Kiyoung Park; Paola E Mera; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  J Biol Inorg Chem       Date:  2016-07-06       Impact factor: 3.358

Review 8.  The organohalide-respiring bacterium Sulfurospirillum multivorans: a natural source for unusual cobamides.

Authors:  Torsten Schubert
Journal:  World J Microbiol Biotechnol       Date:  2017-04-10       Impact factor: 3.312

9.  A prominent glycyl radical enzyme in human gut microbiomes metabolizes trans-4-hydroxy-l-proline.

Authors:  B J Levin; Y Y Huang; S C Peck; Y Wei; A Martínez-Del Campo; J A Marks; E A Franzosa; C Huttenhower; E P Balskus
Journal:  Science       Date:  2017-02-10       Impact factor: 47.728

10.  Bioinformatic characterization of glycyl radical enzyme-associated bacterial microcompartments.

Authors:  Jan Zarzycki; Onur Erbilgin; Cheryl A Kerfeld
Journal:  Appl Environ Microbiol       Date:  2015-09-25       Impact factor: 4.792

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