Literature DB >> 25675500

Visualization of a radical B12 enzyme with its G-protein chaperone.

Marco Jost1, Valentin Cracan2, Paul A Hubbard1, Ruma Banerjee2, Catherine L Drennan3.   

Abstract

G-protein metallochaperones ensure fidelity during cofactor assembly for a variety of metalloproteins, including adenosylcobalamin (AdoCbl)-dependent methylmalonyl-CoA mutase and hydrogenase, and thus have both medical and biofuel development applications. Here, we present crystal structures of IcmF, a natural fusion protein of AdoCbl-dependent isobutyryl-CoA mutase and its corresponding G-protein chaperone, which reveal the molecular architecture of a G-protein metallochaperone in complex with its target protein. These structures show that conserved G-protein elements become ordered upon target protein association, creating the molecular pathways that both sense and report on the cofactor loading state. Structures determined of both apo- and holo-forms of IcmF depict both open and closed enzyme states, in which the cofactor-binding domain is alternatively positioned for cofactor loading and for catalysis. Notably, the G protein moves as a unit with the cofactor-binding domain, providing a visualization of how a chaperone assists in the sequestering of a precious cofactor inside an enzyme active site.

Keywords:  G protein; crystallography; metallochaperone; metallocofactor delivery; vitamin B12

Mesh:

Substances:

Year:  2015        PMID: 25675500      PMCID: PMC4345561          DOI: 10.1073/pnas.1419582112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

Review 1.  Objective comparison of protein structures: error-scaled difference distance matrices.

Authors:  T R Schneider
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-06

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Authors:  Detlef D Leipe; Yuri I Wolf; Eugene V Koonin; L Aravind
Journal:  J Mol Biol       Date:  2002-03-15       Impact factor: 5.469

Review 3.  Radical carbon skeleton rearrangements: catalysis by coenzyme B12-dependent mutases.

Authors:  Ruma Banerjee
Journal:  Chem Rev       Date:  2003-06       Impact factor: 60.622

Review 4.  Transition metal speciation in the cell: insights from the chemistry of metal ion receptors.

Authors:  Lydia A Finney; Thomas V O'Halloran
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5.  Klebsiella aerogenes urease gene cluster: sequence of ureD and demonstration that four accessory genes (ureD, ureE, ureF, and ureG) are involved in nickel metallocenter biosynthesis.

Authors:  M H Lee; S B Mulrooney; M J Renner; Y Markowicz; R P Hausinger
Journal:  J Bacteriol       Date:  1992-07       Impact factor: 3.490

6.  Cloning of full-length methylmalonyl-CoA mutase from a cDNA library using the polymerase chain reaction.

Authors:  R Jansen; F Kalousek; W A Fenton; L E Rosenberg; F D Ledley
Journal:  Genomics       Date:  1989-02       Impact factor: 5.736

7.  Mechanisms of coenzyme B12-dependent rearrangements.

Authors:  J Halpern
Journal:  Science       Date:  1985-02-22       Impact factor: 47.728

8.  The subunit structure of methylmalonyl-CoA mutase from Propionibacterium shermanii.

Authors:  F Francalanci; N K Davis; J Q Fuller; D Murfitt; P F Leadlay
Journal:  Biochem J       Date:  1986-06-01       Impact factor: 3.857

9.  Identification of the gene responsible for the cblA complementation group of vitamin B12-responsive methylmalonic acidemia based on analysis of prokaryotic gene arrangements.

Authors:  C Melissa Dobson; Timothy Wai; Daniel Leclerc; Aaron Wilson; Xuchu Wu; Carole Doré; Thomas Hudson; David S Rosenblatt; Roy A Gravel
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-15       Impact factor: 11.205

10.  The product of the hypB gene, which is required for nickel incorporation into hydrogenases, is a novel guanine nucleotide-binding protein.

Authors:  T Maier; A Jacobi; M Sauter; A Böck
Journal:  J Bacteriol       Date:  1993-02       Impact factor: 3.490

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  12 in total

1.  Structural Basis for Substrate Specificity in Adenosylcobalamin-dependent Isobutyryl-CoA Mutase and Related Acyl-CoA Mutases.

Authors:  Marco Jost; David A Born; Valentin Cracan; Ruma Banerjee; Catherine L Drennan
Journal:  J Biol Chem       Date:  2015-08-28       Impact factor: 5.157

2.  Cofactor Editing by the G-protein Metallochaperone Domain Regulates the Radical B12 Enzyme IcmF.

Authors:  Zhu Li; Kenichi Kitanishi; Umar T Twahir; Valentin Cracan; Derrell Chapman; Kurt Warncke; Ruma Banerjee
Journal:  J Biol Chem       Date:  2017-01-27       Impact factor: 5.157

Review 3.  Metallochaperones and metalloregulation in bacteria.

Authors:  Daiana A Capdevila; Katherine A Edmonds; David P Giedroc
Journal:  Essays Biochem       Date:  2017-05-09       Impact factor: 8.000

4.  Engineered and Native Coenzyme B12-dependent Isovaleryl-CoA/Pivalyl-CoA Mutase.

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5.  Mechanistic Insights into the Metal-Dependent Activation of ZnII-Dependent Metallochaperones.

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Journal:  Inorg Chem       Date:  2019-06-17       Impact factor: 5.165

6.  Allosteric Regulation of Oligomerization by a B12 Trafficking G-Protein Is Corrupted in Methylmalonic Aciduria.

Authors:  Markus Ruetz; Gregory C Campanello; Liam McDevitt; Adam L Yokom; Pramod K Yadav; David Watkins; David S Rosenblatt; Melanie D Ohi; Daniel R Southworth; Ruma Banerjee
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7.  Switch I-dependent allosteric signaling in a G-protein chaperone-B12 enzyme complex.

Authors:  Gregory C Campanello; Michael Lofgren; Adam L Yokom; Daniel R Southworth; Ruma Banerjee
Journal:  J Biol Chem       Date:  2017-09-07       Impact factor: 5.157

Review 8.  Vitamin B12 in the spotlight again.

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9.  Redox-Linked Coordination Chemistry Directs Vitamin B12 Trafficking.

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Journal:  Acc Chem Res       Date:  2021-04-02       Impact factor: 22.384

10.  Interplay between chromophore binding and domain assembly by the B12-dependent photoreceptor protein, CarH.

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