Literature DB >> 24246764

Mechanisms of nuclear actin in chromatin-remodeling complexes.

Prabodh Kapoor1, Xuetong Shen2.   

Abstract

The mystery of nuclear actin has puzzled biologists for decades largely due to the lack of defined experimental systems. However, the development of actin-containing chromatin-modifying complexes as a defined genetic and biochemical system in the past decade has provided an unprecedented opportunity to dissect the mechanism of actin in the nucleus. Although the established functions of actin mostly rely on its dynamic polymerization, the novel finding of the mechanism of action of actin in the INO80 chromatin-remodeling complex suggests a conceptually distinct mode of actin that functions as a monomer. In this review we highlight the new paradigm and discuss how actin interaction with chromatin suggests a fundamental divergence between conventional cytoplasmic actin and nuclear actin. Furthermore, we provide how this framework could be applied to investigations of nuclear actin in other actin-containing chromatin-modifying complexes.
Copyright © 2013 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  INO80; NuA4; SWR1; chromatin remodeling; nuclear actin

Mesh:

Substances:

Year:  2013        PMID: 24246764      PMCID: PMC3995414          DOI: 10.1016/j.tcb.2013.10.007

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  104 in total

1.  Subcellular localization of multiple PREP2 isoforms is regulated by actin, tubulin, and nuclear export.

Authors:  Klaus Haller; Isabel Rambaldi; Eugene Daniels; Mark Featherstone
Journal:  J Biol Chem       Date:  2004-08-30       Impact factor: 5.157

2.  A role for beta-actin in RNA polymerase III transcription.

Authors:  Ping Hu; Si Wu; Nouria Hernandez
Journal:  Genes Dev       Date:  2004-12-01       Impact factor: 11.361

3.  INO80 and gamma-H2AX interaction links ATP-dependent chromatin remodeling to DNA damage repair.

Authors:  Ashby J Morrison; Jessica Highland; Nevan J Krogan; Ayelet Arbel-Eden; Jack F Greenblatt; James E Haber; Xuetong Shen
Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

4.  Chromatin remodelling at a DNA double-strand break site in Saccharomyces cerevisiae.

Authors:  Toyoko Tsukuda; Alastair B Fleming; Jac A Nickoloff; Mary Ann Osley
Journal:  Nature       Date:  2005-11-17       Impact factor: 49.962

5.  The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes.

Authors:  Yong Cai; Jingji Jin; Laurence Florens; Selene K Swanson; Thomas Kusch; Bing Li; Jerry L Workman; Michael P Washburn; Ronald C Conaway; Joan Weliky Conaway
Journal:  J Biol Chem       Date:  2005-01-11       Impact factor: 5.157

6.  Swc2 is a widely conserved H2AZ-binding module essential for ATP-dependent histone exchange.

Authors:  Wei-Hua Wu; Samar Alami; Edward Luk; Chwen-Huey Wu; Subhojit Sen; Gaku Mizuguchi; Debbie Wei; Carl Wu
Journal:  Nat Struct Mol Biol       Date:  2005-11-20       Impact factor: 15.369

7.  The nuclear actin-related protein Act3p/Arp4p is involved in the dynamics of chromatin-modulating complexes.

Authors:  Rie Sunada; Irene Görzer; Yukako Oma; Takahito Yoshida; Noriyuki Suka; Ulrike Wintersberger; Masahiko Harata
Journal:  Yeast       Date:  2005-07-30       Impact factor: 3.239

8.  Cytoplasmic YY1 is associated with increased smooth muscle-specific gene expression: implications for neonatal pulmonary hypertension.

Authors:  Laure Favot; Susan M Hall; Sheila G Haworth; Paul R Kemp
Journal:  Am J Pathol       Date:  2005-12       Impact factor: 4.307

9.  Nuclear actin and myosin I are required for RNA polymerase I transcription.

Authors:  Vlada V Philimonenko; Jian Zhao; Sebastian Iben; Hana Dingová; Katarína Kyselá; Michal Kahle; Hanswalter Zentgraf; Wilma A Hofmann; Primal de Lanerolle; Pavel Hozák; Ingrid Grummt
Journal:  Nat Cell Biol       Date:  2004-11-21       Impact factor: 28.824

10.  The growing pre-mRNA recruits actin and chromatin-modifying factors to transcriptionally active genes.

Authors:  Mikael Sjölinder; Petra Björk; Emilia Söderberg; Nafiseh Sabri; Ann-Kristin Ostlund Farrants; Neus Visa
Journal:  Genes Dev       Date:  2005-08-15       Impact factor: 11.361

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  53 in total

Review 1.  The Histochemistry and Cell Biology omnium-gatherum: the year 2015 in review.

Authors:  Douglas J Taatjes; Jürgen Roth
Journal:  Histochem Cell Biol       Date:  2016-02-15       Impact factor: 4.304

Review 2.  Nuclear roles for actin.

Authors:  Natalia Wesolowska; Péter Lénárt
Journal:  Chromosoma       Date:  2015-05-06       Impact factor: 4.316

3.  Nucleoskeletal regulation of transcription: Actin on MRTF.

Authors:  Ekaterina Sidorenko; Maria K Vartiainen
Journal:  Exp Biol Med (Maywood)       Date:  2019-05-29

Review 4.  Nuclear actin: ancient clue to evolution in eukaryotes?

Authors:  Csaba Bajusz; Péter Borkúti; Ildikó Kristó; Zoltán Kovács; Csilla Abonyi; Péter Vilmos
Journal:  Histochem Cell Biol       Date:  2018-07-17       Impact factor: 4.304

5.  Transcriptional effects of actin-binding compounds: the cytoplasm sets the tone.

Authors:  Florian A Gegenfurtner; Themistoklis Zisis; Nader Al Danaf; Waldemar Schrimpf; Zane Kliesmete; Christoph Ziegenhain; Wolfgang Enard; Uli Kazmaier; Don C Lamb; Angelika M Vollmar; Stefan Zahler
Journal:  Cell Mol Life Sci       Date:  2018-09-11       Impact factor: 9.261

Review 6.  Mechano-modulation of nuclear events regulating oligodendrocyte progenitor gene expression.

Authors:  Eric Tsai; Patrizia Casaccia
Journal:  Glia       Date:  2019-02-08       Impact factor: 7.452

7.  Persistent nuclear actin filaments inhibit transcription by RNA polymerase II.

Authors:  Leonid A Serebryannyy; Megan Parilla; Paolo Annibale; Christina M Cruz; Kyle Laster; Enrico Gratton; Dmitri Kudryashov; Steven T Kosak; Cara J Gottardi; Primal de Lanerolle
Journal:  J Cell Sci       Date:  2016-08-02       Impact factor: 5.285

8.  Nuclear F-actin formation and reorganization upon cell spreading.

Authors:  Matthias Plessner; Michael Melak; Pilar Chinchilla; Christian Baarlink; Robert Grosse
Journal:  J Biol Chem       Date:  2015-03-10       Impact factor: 5.157

Review 9.  Nuclear actin filaments in DNA repair dynamics.

Authors:  Christopher Patrick Caridi; Matthias Plessner; Robert Grosse; Irene Chiolo
Journal:  Nat Cell Biol       Date:  2019-09-03       Impact factor: 28.824

10.  Crystal structure of a nuclear actin ternary complex.

Authors:  Tingting Cao; Lingfei Sun; Yuxiang Jiang; Shanjin Huang; Jiawei Wang; Zhucheng Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-25       Impact factor: 11.205

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