| Literature DB >> 24205410 |
Oriol Mitjà1, David Šmajs, Quique Bassat.
Abstract
Improved understanding of the differential diagnosis of endemic treponematoses is needed to inform clinical practice and to ensure the best outcome for a new global initiative for the eradication of yaws, bejel, and pinta. Traditionally, the human treponematoses have been differentiated based upon their clinical manifestations and epidemiologic characteristics because the etiologic agents are indistinguishable in the laboratory. Serological tests are still considered standard laboratory methods for the diagnosis of endemic treponematoses and new rapid point-of-care treponemal tests have become available which are extremely useful in low-resource settings. In the past ten years, there has been an increasing effort to apply polymerase chain reaction to treponematoses and whole genome fingerprinting techniques have identified genetic signatures that can differentiate the existing treponemal strains; however, definitive diagnosis is also hampered by widespread unavailability of molecular diagnostics. We review the dilemmas in the diagnosis of endemic treponematoses, and advances in the discovery of new diagnostic tools.Entities:
Mesh:
Year: 2013 PMID: 24205410 PMCID: PMC3812090 DOI: 10.1371/journal.pntd.0002283
Source DB: PubMed Journal: PLoS Negl Trop Dis ISSN: 1935-2727
Figure 1Countries with reported data on yaws, bejel, and pinta from 1980 to 2012 [10]–[29], [32].
Data are number of cases reported in a year, unless otherwise indicated. Prev: prevalence. CR: Case report. ND: No data. Shading indicates the countries where cases of endemic treponematoses have been reported within the last 30 years. In some countries the transmission may be restricted to small areas, rather than affecting the entire country. India interrupted transmission in 2004 and declared elimination in 2006. Since 2004, no new cases have been reported. The principal sources of data are WHO reports [10], [16], [24] and scientific articles identified through searches of PubMed about epidemiology of yaws [11]–[15], bejel [17]–[23], and pinta [25]–[27], [29].
Characteristics of the four treponemal diseases.
| T. p. pallidum | T. p. pertenue | T. p. endemicum | T. carateum | |
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| Worldwide | Tropics (hot, humid areas) | Deserts of Africa and Saudi Arabia (hot, dry areas) | Central and South America (hot, humid areas) |
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| Adults (18–30) | Children (2–10) | Children (2–10) | Adults (15–50) |
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| Sexual and congenital | Skin-to-skin contact | Mouth-to-mouth or utensils | Skin-to-skin contact |
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| Common (genitals) | Common (lower extremities) | Rare (oral mucosa) | Common (extremities) |
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| Widespread and systemic | Widespread to skin and bone | Limited to intertriginous areas and facial bone | Limited only to skin |
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| Gummas (10%), neurological (10%), cardiovascular (10–15%) | Destructive lesions of skin and bones (10%) | Destruction of nose/palate | Local skin hypo- achromia |
Differential diagnosis for the mucocutaneous manifestations of endemic treponematoses.
| Yaws | Pinta | Bejel |
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| Syphilis | Eczema | Oral herpes simplex |
| Leishmaniasis | Classic or athrophic lichen planus | Aphtous ulcers |
| Paracoccidiomysosis | Tinea corporis | Angular cheilitis |
| Pyoderma | Syphilis | Syphilis |
| Ecthyma | Tuberculoid leprosy | |
| Tropical ulcer | Psoriasis | |
| Pellagra | ||
| Yaws | ||
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| Syphilis | Pytiriasis alba | Syphilis |
| Psoriasis | Vitiligo | Condyloma acuminata |
| Eczema | Tinea versicolor | Molluscum contagiosum |
| Arthropod bites | Melasma | Seborrheic dermatitis |
| Scabies | Leprosy | Psoriasis |
| Dermatophytosis | Erythema dyschronicum perstans | Dermatophytosis |
| Tuberculoid leprosy | ||
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| Syphilis | Syphilis | |
| Lupus vulgaris | Lupus vulgaris | |
| Deep fundal infections | Deep fundal infections | |
| Mycobacterial infection | Mycobacteris infection | |
| Rhinosporidiosis | Rhinosporidiosis | |
| Rhinoscleroma | Rhinoscleroma |
Figure 2Common yaws, bejel, and pinta lesions in 2013.
Papillomatous primary yaws lesion (A); disseminated papilloma of secondary yaws (B); labial mucosal plaques of primary bejel (C); disfiguring infiltration of the nose, glabella, and forehead in a patient with secondary bejel (D); squamous plaque of primary pinta (E); late achromic pinta (F). Sources of photographs: O. Mitjà, Papua New Guinea (A, B); A. Abdolrasouli, Iran (C, D); F. Gómez, Mexico (E, F). The individuals photographed for this publication were informed of the purpose of the photograph and they agreed to have their photograph taken and potentially published.
Genomic features and historic overview of selected genetic differences found in nonvenereal treponemes.
| T. p. pallidum | T. p. pertenue | Fribourg-Blanc | T. p. endemicum | Year (Ref.) | ||
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| Genome size (kbp) | 1138.0–1140.0 | 1139.3–1139.7 | 1140.5 | 1137.7 | ||
| Genome sequence identity with sequences of T. p. pallidum (%) | N/A | 99.8 | 99.8 | ∼99.7 | 1998 | |
| GenBank acc. no. | AE000520.1 | CP002374.1 | CP003902.1 | N/A | ||
| CP000805.1 | CP002375.1 | |||||
| CP001752.1 | CP002376.1 | |||||
| CP003115.1 | ||||||
| CP003064.1 | ||||||
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| 122 | A | G | G | G | 1989 |
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| 759/191605 | C/cut | T/no cut | T/no cut | T/no cut | 1998 |
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| 579/269535 | A/no cut | G/cut | G/cut | G/cut | 1999 |
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| 1726–1733/134662–134669 | CATTG/cut | TATTA/no cut | CATTG/cut | CATTG/cut | 2006 |
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| 1759–1766/672713–672720 | T/no cut | T/no cut | T/no cut | C/cut | 2006 |
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| 547–1266/462430–463149 | 4–16 | 3–12 | 15 | 8, 10 | 2007, 2008 |
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| 20–25/34079–34084 | 9xC, 12xC |
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| 2011 |
Genome positions are shown in the T. p. pertenue Samoa D genomic sequence (GenBank acc. no. CP002374.1).
For T. p. endemicum, the genome size and the genome sequence identity with T. pallidum were estimated based on preliminary data.
N/A, not applicable.
Genetic differences between T. p. pallidum and T. p. pertenue were also determined in tprJ (TP0621), in tp92 (TP0326), and in six genomic regions as described by Stamm et al. (1998) [89], Cameron et al. (2000) [90], and Mikalová et al. (2010) [5], respectively.
Position 123 published by Noordhoek et al. (1989) (tpf1 vs. tyf1); this position is in fact position 122.
No cut for T. p. pallidum Mexico A, SS14, and Sea81-3 strains.
8 and 10 repeats found in the T. p. endemicum Bosnia A and Iraq B, respectively [95].
IGR19 is an intergenic spacer between fliG (TP0026) and putative hemolysin gene hlyB (TP0027) in the Nichols genome (AE000520.1); this region is a part of the hlyB gene (TP0027) in the Samoa D genome (CP002374.1).
Figure 3Identified genetic loci showing sequence differences in T. p. pertenue and T. p. endemicum
[, [81 . These regions are potentially suitable for detection of TPE or TEN strains; however, further testing of these regions in additional strains is needed. Indels specific to tested TPE and TEN strains are shown in red and green, respectively. Only genetic differences consistently present between all completely sequenced TPE and TPA strains are shown. In the case of TEN, only one strain (Bosnia A) has been analyzed on a genome level. Coordinates of insertions in the TPE genomes are taken from the Samoa D genome (GenBank acc. no. CP002374.1): 148701–148781, 331996–332630, 594549–594600, 629981–629992, 945694–945717; coordinates of deletions (CP002374.1): 72694–72695, 150386–150387, 153904–154035, 158201–158202, 279101–279102, 348027–348028, 492496–492501, 1125682–1125683; coordinates of repetitions (CP002374.1): 462430–463149, 498895–499200, 1051990–1052003. Coordinates of cumulated SNPs (defined as ten or more nucleotide changes present in the 100-bp genome window, CP002374.1): 135500–135599, 148700–148799, 153800–153899, 154000–154099, 331200–331399, 331700–332899, 493000–493099, 672000–672199, 672500–673699, 675300–675899, 800500–800599, 936700–936799, 938000–938099. For TEN Bosnia A, only coordinates of insertions, deletions, and repetitions are shown; coordinates of insertions (according to CP002374.1): 148701–148781, 331996–332630, 594549–594600; coordinates of deletions: 72694–72695, 72719–72734, 94986–94998, 150386–150387, 153904–154035, 279101–279102, 492496–492501, 945694–945717; coordinates of repetitions: 462430–463149, 498895–499200,1051990–1052003. N/A, not applicable.