Literature DB >> 24202256

RFLP maps of potato and their alignment with the homoeologous tomato genome.

C Gebhardt1, E Ritter, A Barone, T Debener, B Walkemeier, U Schachtschabel, H Kaufmann, R D Thompson, M W Bonierbale, M W Ganal, S D Tanksley, F Salamini.   

Abstract

An RFLP linkage map of the potato is presented which comprises 304 loci derived from 230 DNA probes and one morphological marker (tuber skin color). The self-incompatibility locus of potato was mapped to chromosome I, which is homoeologous to tomato chromosome I. By mapping chromosome-specific tomato RFLP markers in potato and, vice versa, potato markers in tomato, the different potato and tomato RFLP maps were aligned to each other and the similarity of the potato and tomato genome was confirmed. The numbers given to the 12 potato chromosomes are now in accordance with the established tomato nomenclature. Comparisons between potato RFLP maps derived from different genetic backgrounds revealed conservation of marker order but differences in chromosome and total map length. In particular, significant reduction of map length was observed in interspecific compared to intraspecific crosses. The distribution of regions with distorted segregation ratios in the genome was analyzed for four potato parents. The most prominent distortion of recombination was found to be caused by the self-incompatibility locus.

Entities:  

Year:  1991        PMID： 24202256     DOI： 10.1007/BF00229225

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN： 0040-5752            Impact factor:   5.699


  25 in total

1.  Conservation of gene repertoire but not gene order in pepper and tomato.

Authors:  S D Tanksley; R Bernatzky; N L Lapitan; J P Prince
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

2.  Different Frequency in the Recovery of Crossover Products from Male and Female Gametes of Plants Hypoploid for B-a Translocations in Maize.

Authors:  D S Robertson
Journal:  Genetics       Date:  1984-05       Impact factor: 4.562

3.  A Genetic Map of Lettuce (Lactuca sativa L.) with Restriction Fragment Length Polymorphism, Isozyme, Disease Resistance and Morphological Markers.

Authors:  B S Landry; R V Kesseli; B Farrara; R W Michelmore
Journal:  Genetics       Date:  1987-06       Impact factor: 4.562

4.  Construction of genetic linkage maps in maize and tomato using restriction fragment length polymorphisms.

Authors:  T Helentjaris; M Slocum; S Wright; A Schaefer; J Nienhuis
Journal:  Theor Appl Genet       Date:  1986-09       Impact factor: 5.699

5.  Localization by restriction fragment length polymorphism mapping in potato of a major dominant gene conferring resistance to the potato cyst nematode Globodera rostochiensis.

Authors:  A Barone; E Ritter; U Schachtschabel; T Debener; F Salamini; C Gebhardt
Journal:  Mol Gen Genet       Date:  1990-11

6.  Differential expression of genes in potato tubers after wounding.

Authors:  J Logemann; J E Mayer; J Schell; L Willmitzer
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

7.  Restriction Fragment Length Polymorphism Linkage Map of Arabidopsis thaliana.

Authors:  H. G. Nam; J. Giraudat; B. Den Boer; F. Moonan; WDB. Loos; B. M. Hauge; H. M. Goodman
Journal:  Plant Cell       Date:  1989-07       Impact factor: 11.277

8.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

9.  Mapping of ripening-related or -specific cDNA clones of tomato (Lycopersicon esculentum).

Authors:  S M Kinzer; S J Schwager; M A Mutschler
Journal:  Theor Appl Genet       Date:  1990-04       Impact factor: 5.699

10.  RFLP markers linked to the root knot nematode resistance gene Mi in tomato.

Authors:  R Klein-Lankhorst; P Rietveld; B Machiels; R Verkerk; R Weide; C Gebhardt; M Koornneef; P Zabel
Journal:  Theor Appl Genet       Date:  1991-05       Impact factor: 5.699
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  116 in total

Review 1.  Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes.

Authors:  J S Heslop-Harrison
Journal:  Plant Cell       Date:  2000-05       Impact factor: 11.277

2.  A linkage map of meadow fescue ( Festuca pratensis Huds.) and comparative mapping with other Poaceae species.

Authors:  V Alm; C Fang; C S Busso; K M Devos; K Vollan; Z Grieg; O A Rognli
Journal:  Theor Appl Genet       Date:  2003-08-16       Impact factor: 5.699

3.  Analysis of the region in between two closely linked patatin genes: class II promoter activity in tuber, root and leaf.

Authors:  J P Nap; W G Dirkse; J Louwerse; J Onstenk; R Visser; A Loonen; F Heidekamp; W J Stiekema
Journal:  Plant Mol Biol       Date:  1992-11       Impact factor: 4.076

4.  Genetic mapping and molecular characterization of the self-incompatibility (S) locus in Petunia inflata.

Authors:  Yan Wang; Xi Wang; Andrew G McCubbin; Teh-hui Kao
Journal:  Plant Mol Biol       Date:  2003-11       Impact factor: 4.076

5.  Microsatellite and AFLP markers in the Prunus persica [L. (Batsch)]xP. ferganensis BC(1)linkage map: saturation and coverage improvement.

Authors:  I Verde; M Lauria; M T Dettori; E Vendramin; C Balconi; S Micali; Y Wang; M T Marrazzo; G Cipriani; H Hartings; R Testolin; A G Abbott; M Motto; R Quarta
Journal:  Theor Appl Genet       Date:  2005-10-11       Impact factor: 5.699

6.  Genetic characterization of the polycotyledon locus in tomato.

Authors:  Kavitha Madishetty; P Bauer; M S Sharada; A S A Al-Hammadi; R Sharma
Journal:  Theor Appl Genet       Date:  2006-06-29       Impact factor: 5.699

7.  High-resolution fine mapping and fluorescence in situ hybridization analysis of sun, a locus controlling tomato fruit shape, reveals a region of the tomato genome prone to DNA rearrangements.

Authors:  E van der Knaap; A Sanyal; S A Jackson; S D Tanksley
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

8.  Sequencing of cDNA clones from the genetic map of tomato (Lycopersicon esculentum).

Authors:  M W Ganal; R Czihal; U Hannappel; D U Kloos; A Polley; H Q Ling
Journal:  Genome Res       Date:  1998-08       Impact factor: 9.043

9.  Transmission ratio distortion of molecular markers in a doubled haploid population originated from a natural hybrid between Osmunda japonica and O. lancea.

Authors:  Yoko Yatabe-Kakugawa; Chie Tsutsumi; Yumiko Hirayama; Shizuka Tsuneki; Noriaki Murakami; Masahiro Kato
Journal:  J Plant Res       Date:  2012-12-06       Impact factor: 2.629

10.  Long-range physical maps of two loci (Aps-1 and GP79) flanking the root-knot nematode resistance gene (Mi) near the centromere of tomato chromosome 6.

Authors:  R A van Daelen; F Gerbens; F van Ruissen; J Aarts; J Hontelez; P Zabel
Journal:  Plant Mol Biol       Date:  1993-10       Impact factor: 4.076
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