Literature DB >> 12923626

A linkage map of meadow fescue ( Festuca pratensis Huds.) and comparative mapping with other Poaceae species.

V Alm1, C Fang, C S Busso, K M Devos, K Vollan, Z Grieg, O A Rognli.   

Abstract

A genetic linkage map has been constructed for meadow fescue ( Festuca pratensis Huds.) (2n=2 x=14) using a full-sib family of a cross between a genotype from a Norwegian population (HF2) and a genotype from a Yugoslavian cultivar (B14). The two-way pseudo-testcross procedure has been used to develop separate maps for each parent, as well as a combined map. A total number of 550 loci have been mapped using homologous and heterologous RFLPs, AFLPs, isozymes and SSRs. The combined map consists of 466 markers, has a total length of 658.8 cM with an average marker density of 1.4 cM/marker. A high degree of orthology and colinearity was observed between meadow fescue and the Triticeae genome(s) for all linkage groups, and the individual linkage groups were designated 1F-7F in accordance with the orthologous Triticeae chromosomes. As expected, the meadow fescue linkage groups were highly orthologous and co-linear with Lolium, and with oat, maize and sorghum, generally in the same manner as the Triticeae chromosomes. It was shown that the evolutionary 4AL/5AL translocation, which characterises some of the Triticeae species, is not present in the meadow fescue genome. A putative insertion of a segment orthologous to Triticeae 2 at the top of 6F, similar to the rearrangement found in the wheat B and the rye R genome, was also observed. In addition, chromosome 4F is completely orthologous to rice chromosome 3 in contrast to the Triticeae where this rice chromosome is distributed over homoeologous group 4 and 5 chromosomes. The meadow fescue genome thus has a more ancestral configuration than any of the Triticeae genomes. The extended meadow fescue map reported here provides the opportunity for beneficial cross-species transfer of genetic knowledge, particularly from the complete genome sequence of rice.

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Year:  2003        PMID: 12923626     DOI: 10.1007/s00122-003-1399-5

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  45 in total

1.  Physical characterization of the homoeologous group 5 chromosomes of wheat in terms of rice linkage blocks, and physical mapping of some important genes.

Authors:  R N Sarma; L Fish; B S Gill; J W Snape
Journal:  Genome       Date:  2000-02       Impact factor: 2.166

2.  Effects of distance and pollen competition on gene flow in the wind-pollinated grass Festuca pratensis Huds.

Authors:  O A Rognli; N O Nilsson; M Nurminiemi
Journal:  Heredity (Edinb)       Date:  2000-12       Impact factor: 3.821

3.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

4.  A view of plant dehydrins using antibodies specific to the carboxy terminal peptide.

Authors:  T J Close; R D Fenton; F Moonan
Journal:  Plant Mol Biol       Date:  1993-10       Impact factor: 4.076

5.  An SSR-based genetic linkage map for perennial ryegrass ( Lolium perenne L.).

Authors:  S. Jones; P. Dupal; L. Dumsday; J. Hughes; W. Forster
Journal:  Theor Appl Genet       Date:  2002-05-23       Impact factor: 5.699

6.  Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids.

Authors:  W A Wilson; S E Harrington; W L Woodman; M Lee; M E Sorrells; S R McCouch
Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

7.  RFLP-based genetic maps of the homoeologous group 5 chromosomes of bread wheat (Triticum aestivum L.).

Authors:  D X Xie; K M Devos; G Moore; M D Gale
Journal:  Theor Appl Genet       Date:  1993-10       Impact factor: 5.699

8.  Development of an RFLP map in diploid alfalfa.

Authors:  E C Brummer; J H Bouton; G Kochert
Journal:  Theor Appl Genet       Date:  1993-04       Impact factor: 5.699

9.  Molecular mapping of wheat. Homoeologous group 2.

Authors:  J C Nelson; A E Deynze; M E Sorrells; E Autrique; Y H Lu; M Merlino; M Atkinson; P Leroy
Journal:  Genome       Date:  1995-06       Impact factor: 2.166

10.  Structural evolution of wheat chromosomes 4A, 5A, and 7B and its impact on recombination.

Authors:  K M Devos; J Dubcovsky; J Dvořák; C N Chinoy; M D Gale
Journal:  Theor Appl Genet       Date:  1995-07       Impact factor: 5.699

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  42 in total

1.  Genetic mapping of DArT markers in the Festuca-Lolium complex and their use in freezing tolerance association analysis.

Authors:  Jan Bartoš; Simen Rød Sandve; Roland Kölliker; David Kopecký; Pavla Christelová; Stěpán Stočes; Liv Ostrem; Arild Larsen; Andrzej Kilian; Odd-Arne Rognli; Jaroslav Doležel
Journal:  Theor Appl Genet       Date:  2011-01-07       Impact factor: 5.699

2.  Genomic constitution of Festuca × Lolium hybrids revealed by the DArTFest array.

Authors:  David Kopecký; Jan Bartoš; Pavla Christelová; Vladimír Cernoch; Andrzej Kilian; Jaroslav Doležel
Journal:  Theor Appl Genet       Date:  2010-09-25       Impact factor: 5.699

3.  Linkage map construction in allotetraploid creeping bentgrass (Agrostis stolonifera L.).

Authors:  N Chakraborty; J Bae; S Warnke; T Chang; G Jung
Journal:  Theor Appl Genet       Date:  2005-06-25       Impact factor: 5.699

4.  Molecular diversity of local Norwegian meadow fescue (Festuca pratensis Huds.) populations and Nordic cultivars-consequences for management and utilisation.

Authors:  S Fjellheim; O A Rognli
Journal:  Theor Appl Genet       Date:  2005-07-21       Impact factor: 5.699

5.  Quantitative trait loci controlling vernalisation requirement, heading time and number of panicles in meadow fescue (Festuca pratensis Huds.).

Authors:  A Ergon; C Fang; Ø Jørgensen; T S Aamlid; O A Rognli
Journal:  Theor Appl Genet       Date:  2005-10-19       Impact factor: 5.699

6.  QTL mapping of vernalization response in perennial ryegrass (Lolium perenne L.) reveals co-location with an orthologue of wheat VRN1.

Authors:  Louise Bach Jensen; Jeppe Reitan Andersen; Ursula Frei; Yongzhong Xing; Chris Taylor; Preben Bach Holm; Thomas Lübberstedt
Journal:  Theor Appl Genet       Date:  2004-12-24       Impact factor: 5.699

7.  Chromosomal rearrangements differentiating the ryegrass genome from the Triticeae, oat, and rice genomes using common heterologous RFLP probes.

Authors:  S Sim; T Chang; J Curley; S E Warnke; R E Barker; G Jung
Journal:  Theor Appl Genet       Date:  2005-03-02       Impact factor: 5.699

8.  Exploitation of interspecific diversity for monocot crop improvement.

Authors:  J King; I Armstead; J Harper; L Ramsey; J Snape; R Waugh; C James; A Thomas; D Gasior; R Kelly; L Roberts; P Gustafson; I King
Journal:  Heredity (Edinb)       Date:  2013-01-16       Impact factor: 3.821

9.  Flow sorting and sequencing meadow fescue chromosome 4F.

Authors:  David Kopecký; Mihaela Martis; Jarmila Číhalíková; Eva Hřibová; Jan Vrána; Jan Bartoš; Jitka Kopecká; Federica Cattonaro; Štěpán Stočes; Petr Novák; Pavel Neumann; Jiří Macas; Hana Šimková; Bruno Studer; Torben Asp; James H Baird; Petr Navrátil; Miroslava Karafiátová; Marie Kubaláková; Jan Šafář; Klaus Mayer; Jaroslav Doležel
Journal:  Plant Physiol       Date:  2013-10-04       Impact factor: 8.340

10.  A perennial ryegrass CBF gene cluster is located in a region predicted by conserved synteny between Poaceae species.

Authors:  K Tamura; T Yamada
Journal:  Theor Appl Genet       Date:  2006-10-31       Impact factor: 5.699

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