Literature DB >> 12359906

Restriction Fragment Length Polymorphism Linkage Map of Arabidopsis thaliana.

H. G. Nam1, J. Giraudat, B. Den Boer, F. Moonan, WDB. Loos, B. M. Hauge, H. M. Goodman.   

Abstract

We have constructed a restriction fragment length polymorphism (RFLP) linkage map of the nuclear genome of the small flowering plant Arabidopsis thaliana. The map is based on the meiotic segregation of both RFLP and morphological genetic markers from five independent crosses. The morphological markers on each of the five chromosomes were included in the crosses to allow alignment of the RFLP map with the established genetic map. The map contains 94 new randomly distributed molecular markers (nine identified cloned Arabidopsis genes and 85 genomic cosmid clones) that detect polymorphisms between the Landsberg erecta and Columbia races. In addition, 17 markers from an independently constructed RFLP map of the Arabidopsis genome [Chang, C., Bowman, J.L., DeJohn, A.W., Lander, E.S., and Meyerowitz, E.M. (1988). Proc. Natl. Acad. Sci. USA 85, 6856-6860] have been included to permit integration of the two RFLP maps.

Entities:  

Year:  1989        PMID: 12359906      PMCID: PMC159806          DOI: 10.1105/tpc.1.7.699

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  9 in total

1.  Toward a physical map of the genome of the nematode Caenorhabditis elegans.

Authors:  A Coulson; J Sulston; S Brenner; J Karn
Journal:  Proc Natl Acad Sci U S A       Date:  1986-10       Impact factor: 11.205

2.  Restriction fragment length polymorphism linkage map for Arabidopsis thaliana.

Authors:  C Chang; J L Bowman; A W DeJohn; E S Lander; E M Meyerowitz
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

3.  Intron existence predated the divergence of eukaryotes and prokaryotes.

Authors:  M C Shih; P Heinrich; H M Goodman
Journal:  Science       Date:  1988-11-25       Impact factor: 47.728

4.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

5.  A cosmid vector for systematic chromosome walking.

Authors:  S H Cross; P F Little
Journal:  Gene       Date:  1986       Impact factor: 3.688

6.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

7.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

8.  Characterization of the genome of Arabidopsis thaliana.

Authors:  R E Pruitt; E M Meyerowitz
Journal:  J Mol Biol       Date:  1986-01-20       Impact factor: 5.469

9.  A new locus (NIA 1) in Arabidopsis thaliana encoding nitrate reductase.

Authors:  C L Cheng; J Dewdney; H G Nam; B G den Boer; H M Goodman
Journal:  EMBO J       Date:  1988-11       Impact factor: 11.598

  9 in total
  81 in total

1.  The ram1 mutant of Arabidopsis exhibits severely decreased beta-amylase activity.

Authors:  R J Laby; D Kim; S I Gibson
Journal:  Plant Physiol       Date:  2001-12       Impact factor: 8.340

2.  A sequence-based map of Arabidopsis genes with mutant phenotypes.

Authors:  David W Meinke; Laura K Meinke; Thomas C Showalter; Anna M Schissel; Lukas A Mueller; Iris Tzafrir
Journal:  Plant Physiol       Date:  2003-02       Impact factor: 8.340

3.  Development of an efficient two-element transposon tagging system in Arabidopsis thaliana.

Authors:  I Bancroft; A M Bhatt; C Sjodin; S Scofield; J D Jones; C Dean
Journal:  Mol Gen Genet       Date:  1992-06

4.  A molecular marker-based linkage map of Phaseolus vulgaris L.

Authors:  C E Vallejos; N S Sakiyama; C D Chase
Journal:  Genetics       Date:  1992-07       Impact factor: 4.562

Review 5.  Natural variation in Arabidopsis: from molecular genetics to ecological genomics.

Authors:  Detlef Weigel
Journal:  Plant Physiol       Date:  2011-12-06       Impact factor: 8.340

6.  Nomad DNA--a model for movement and duplication of DNA sequences in plant genomes.

Authors:  E Pichersky
Journal:  Plant Mol Biol       Date:  1990-09       Impact factor: 4.076

7.  Light-Stimulated Apical Hook Opening in Wild-Type Arabidopsis thaliana Seedlings.

Authors:  E. Liscum; R. P. Hangarter
Journal:  Plant Physiol       Date:  1993-02       Impact factor: 8.340

8.  Genetic and Physiological Analysis of a New Locus in Arabidopsis That Confers Resistance to 1-Aminocyclopropane-1-Carboxylic Acid and Ethylene and Specifically Affects the Ethylene Signal Transduction Pathway.

Authors:  D. Van Der Straeten; A. Djudzman; W. Van Caeneghem; J. Smalle; M. Van Montagu
Journal:  Plant Physiol       Date:  1993-06       Impact factor: 8.340

Review 9.  The genome of Arabidopsis thaliana.

Authors:  H M Goodman; J R Ecker; C Dean
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

10.  NDR1, a locus of Arabidopsis thaliana that is required for disease resistance to both a bacterial and a fungal pathogen.

Authors:  K S Century; E B Holub; B J Staskawicz
Journal:  Proc Natl Acad Sci U S A       Date:  1995-07-03       Impact factor: 11.205

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