Literature DB >> 24161030

The protonation states of oxo-bridged Mn(IV) dimers resolved by experimental and computational Mn K pre-edge X-ray absorption spectroscopy.

Vera Krewald1, Benedikt Lassalle-Kaiser, Thaddeus T Boron, Christopher J Pollock, Jan Kern, Martha A Beckwith, Vittal K Yachandra, Vincent L Pecoraro, Junko Yano, Frank Neese, Serena DeBeer.   

Abstract

In nature, the protonation of oxo bridges is a commonly encountered mechanism for fine-tuning chemical properties and reaction pathways. Often, however, the protonation states are difficult to establish experimentally. This is of particular importance in the oxygen evolving complex of photosystem II, where identification of the bridging oxo protonation states is one of the essential requirements toward unraveling the mechanism. In order to establish a combined experimental and theoretical protocol for the determination of protonation states, we have systematically investigated a series of Mn model complexes by Mn K pre-edge X-ray absorption spectroscopy. An ideal test case for selective bis-μ-oxo-bridge protonation in a Mn dimer is represented by the system [Mn(IV)2(salpn)2(μ-OHn)2](n+). Although the three species [Mn(IV)2(salpn)2(μ-O)2], [Mn(IV)2(salpn)2(μ-O)(μ-OH)](+) and [Mn(IV)2(salpn)2(μ-OH)2](2+) differ only in the protonation of the oxo bridges, they exhibit distinct differences in the pre-edge region while maintaining the same edge energy. The experimental spectra are correlated in detail to theoretically calculated spectra. A time-dependent density functional theory approach for calculating the pre-edge spectra of molecules with multiple metal centers is presented, using both high spin (HS) and broken symmetry (BS) electronic structure solutions. The most intense pre-edge transitions correspond to an excitation of the Mn 1s core electrons into the unoccupied orbitals of local e(g) character (d(z)(2) and d(xy) based in the chosen coordinate system). The lowest energy experimental feature is dominated by excitations of 1s-α electrons, and the second observed feature is primarily attributed to 1s-β electron excitations. The observed energetic separation is due to spin polarization effects in spin-unrestricted density functional theory and models final state multiplet effects. The effects of spin polarization on the calculated Mn K pre-edge spectra, in both the HS and BS solutions, are discussed in terms of the strength of the antiferromagnetic coupling and associated changes in the covalency of Mn-O bonds. The information presented in this paper is complemented with the X-ray emission spectra of the same compounds published in an accompanying paper. Taken together, the two studies provide the foundation for a better understanding of the X-ray spectroscopic data of the oxygen evolving complex (OEC) in photosystem II.

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Year:  2013        PMID: 24161030      PMCID: PMC3911776          DOI: 10.1021/ic4008203

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  43 in total

1.  Ligand field transitions and the origin of zero field splitting in [PPh4][FeCl4] and [NEt4][Fe(SR)4] (R = 2,3,5,6-Me4C6H): a model for the high-spin Fe(III) site in rubredoxin.

Authors:  J C Deaton; M S Gebhard; S A Koch; M Millar; E I Solomon
Journal:  J Am Chem Soc       Date:  1988-08-01       Impact factor: 15.419

2.  Protonation of the binuclear metal center within the active site of phosphotriesterase.

Authors:  Cynthia R Samples; Timothy Howard; Frank M Raushel; Victoria J DeRose
Journal:  Biochemistry       Date:  2005-08-23       Impact factor: 3.162

3.  Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å.

Authors:  Yasufumi Umena; Keisuke Kawakami; Jian-Ren Shen; Nobuo Kamiya
Journal:  Nature       Date:  2011-04-17       Impact factor: 49.962

4.  Density Functional Calculations of Electronic Structure, Charge Distribution, and Spin Coupling in Manganese-Oxo Dimer Complexes.

Authors:  X. G. Zhao; W. H. Richardson; J.-L. Chen; J. Li; L. Noodleman; H.-L. Tsai; D. N. Hendrickson
Journal:  Inorg Chem       Date:  1997-03-12       Impact factor: 5.165

5.  A new quantum chemical approach to the magnetic properties of oligonuclear transition-metal complexes: application to a model for the tetranuclear manganese cluster of photosystem II.

Authors:  Dimitrios A Pantazis; Maylis Orio; Taras Petrenko; Samir Zein; Eckhard Bill; Wolfgang Lubitz; Johannes Messinger; Frank Neese
Journal:  Chemistry       Date:  2009       Impact factor: 5.236

6.  The effect of Mn oxidation state on metal core electron excitations in manganese dimers: a time-dependent density functional investigation.

Authors:  Adrian R Jaszewski; Rob Stranger; Ronald J Pace
Journal:  Phys Chem Chem Phys       Date:  2009-07-21       Impact factor: 3.676

7.  Toward the assignment of the manganese oxidation pattern in the water-oxidizing complex of photosystem II: a time-dependent DFT study of XANES energies.

Authors:  Adrian R Jaszewski; Simon Petrie; Ronald J Pace; Rob Stranger
Journal:  Chemistry       Date:  2011-04-05       Impact factor: 5.236

8.  Geometries of Transition-Metal Complexes from Density-Functional Theory.

Authors:  Michael Bühl; Hendrik Kabrede
Journal:  J Chem Theory Comput       Date:  2006-09       Impact factor: 6.006

9.  Oxygen-evolving Mn cluster in photosystem II: the protonation pattern and oxidation state in the high-resolution crystal structure.

Authors:  Artur Galstyan; Arturo Robertazzi; Ernst Walter Knapp
Journal:  J Am Chem Soc       Date:  2012-04-23       Impact factor: 15.419

10.  A structure-consistent mechanism for dioxygen formation in photosystem II.

Authors:  Per E M Siegbahn
Journal:  Chemistry       Date:  2008       Impact factor: 5.236

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  18 in total

1.  X-ray Absorption and Emission Study of Dioxygen Activation by a Small-Molecule Manganese Complex.

Authors:  Julian A Rees; Vlad Martin-Diaconescu; Julie A Kovacs; Serena DeBeer
Journal:  Inorg Chem       Date:  2015-06-10       Impact factor: 5.165

2.  High-Energy-Resolution Fluorescence-Detected X-ray Absorption of the Q Intermediate of Soluble Methane Monooxygenase.

Authors:  Rebeca G Castillo; Rahul Banerjee; Caleb J Allpress; Gregory T Rohde; Eckhard Bill; Lawrence Que; John D Lipscomb; Serena DeBeer
Journal:  J Am Chem Soc       Date:  2017-12-01       Impact factor: 15.419

3.  A High-Valent Non-Heme μ-Oxo Manganese(IV) Dimer Generated from a Thiolate-Bound Manganese(II) Complex and Dioxygen.

Authors:  Deborah Brazzolotto; Fabián G Cantú Reinhard; Julian Smith-Jones; Marius Retegan; Lucia Amidani; Abayomi S Faponle; Kallol Ray; Christian Philouze; Sam P de Visser; Marcello Gennari; Carole Duboc
Journal:  Angew Chem Int Ed Engl       Date:  2017-06-09       Impact factor: 15.336

4.  Mn K-edge X-ray absorption studies of mononuclear Mn(III)-hydroxo complexes.

Authors:  Derek B Rice; Gayan B Wijeratne; Timothy A Jackson
Journal:  J Biol Inorg Chem       Date:  2017-10-20       Impact factor: 3.358

5.  Experimental and computational X-ray emission spectroscopy as a direct probe of protonation states in oxo-bridged Mn(IV) dimers relevant to redox-active metalloproteins.

Authors:  Benedikt Lassalle-Kaiser; Thaddeus T Boron; Vera Krewald; Jan Kern; Martha A Beckwith; Mario U Delgado-Jaime; Henning Schroeder; Roberto Alonso-Mori; Dennis Nordlund; Tsu-Chien Weng; Dimosthenis Sokaras; Frank Neese; Uwe Bergmann; Vittal K Yachandra; Serena DeBeer; Vincent L Pecoraro; Junko Yano
Journal:  Inorg Chem       Date:  2013-10-25       Impact factor: 5.165

6.  Quantification of Ni-N-O Bond Angles and NO Activation by X-ray Emission Spectroscopy.

Authors:  Phan N Phu; Carlos E Gutierrez; Subrata Kundu; Dimosthenis Sokaras; Thomas Kroll; Timothy H Warren; S Chantal E Stieber
Journal:  Inorg Chem       Date:  2020-12-29       Impact factor: 5.436

7.  Mn K-edge X-ray absorption studies of oxo- and hydroxo-manganese(IV) complexes: experimental and theoretical insights into pre-edge properties.

Authors:  Domenick F Leto; Timothy A Jackson
Journal:  Inorg Chem       Date:  2014-06-05       Impact factor: 5.165

8.  CaMn3 IV O4 Cubane Models of the Oxygen-Evolving Complex: Spin Ground States S<9/2 and the Effect of Oxo Protonation.

Authors:  Heui Beom Lee; Angela A Shiau; David A Marchiori; Paul H Oyala; Byung-Kuk Yoo; Jens T Kaiser; Douglas C Rees; R David Britt; Theodor Agapie
Journal:  Angew Chem Int Ed Engl       Date:  2021-07-01       Impact factor: 16.823

9.  Study of iron dimers reveals angular dependence of valence-to-core X-ray emission spectra.

Authors:  Christopher J Pollock; Kyle M Lancaster; Kenneth D Finkelstein; Serena DeBeer
Journal:  Inorg Chem       Date:  2014-09-11       Impact factor: 5.165

10.  Ca K-edge XAS as a probe of calcium centers in complex systems.

Authors:  Vlad Martin-Diaconescu; Marcello Gennari; Bertrand Gerey; Emily Tsui; Jacob Kanady; Rosalie Tran; Jacques Pécaut; Dimitrios Maganas; Vera Krewald; Eric Gouré; Carole Duboc; Junko Yano; Theodor Agapie; Marie-Noelle Collomb; Serena DeBeer
Journal:  Inorg Chem       Date:  2014-12-10       Impact factor: 5.165

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